RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C RKI1Q12189 258 aa8.64□□□□□ -1.03
VPS60YDR486C VMA9Q3E7B6 73 aa8.64□□□□□ -1.03
VPS60YDR486C QCR9P22289 66 aa8.63□□□□□ -1.03
VPS60YDR486C YBL059WP34224 193 aa8.63□□□□□ -1.03
VPS60YDR486C GPP2P40106 250 aaKnown RBP8.63□□□□□ -1.03
VPS60YDR486C YAP1802P53309 568 aa8.63□□□□□ -1.03
VPS60YDR486C BOR1P53838 576 aa8.63□□□□□ -1.03
VPS60YDR486C ISU1Q03020 165 aa8.63□□□□□ -1.03
VPS60YDR486C POS5Q06892 414 aa8.63□□□□□ -1.03
VPS60YDR486C SDO1Q07953 250 aaKnown RBP8.63□□□□□ -1.03
VPS60YDR486C YOR097CQ12274 175 aaPredicted RBP8.63□□□□□ -1.03
VPS60YDR486C CCW14O13547 238 aa8.62□□□□□ -1.03
VPS60YDR486C ILV5P06168 395 aaKnown RBP8.62□□□□□ -1.03
VPS60YDR486C SHB17P36136 271 aaKnown RBP8.62□□□□□ -1.03
VPS60YDR486C MCM22P47167 239 aa8.62□□□□□ -1.03
VPS60YDR486C YMR007WQ03675 126 aa8.62□□□□□ -1.03
VPS60YDR486C AVO2Q04749 426 aa8.62□□□□□ -1.03
VPS60YDR486C CTR3Q06686 241 aa8.62□□□□□ -1.03
VPS60YDR486C PAA1Q12447 191 aaKnown RBP8.62□□□□□ -1.03
VPS60YDR486C FPR2P32472 135 aa8.61□□□□□ -1.03
VPS60YDR486C SRB6P32570 121 aa8.61□□□□□ -1.03
VPS60YDR486C YBL071CP38185 102 aa8.61□□□□□ -1.03
VPS60YDR486C GNP1P48813 663 aa8.61□□□□□ -1.03
VPS60YDR486C MIC27P50945 234 aa8.61□□□□□ -1.03
VPS60YDR486C SHH3Q04487 196 aa8.61□□□□□ -1.03
VPS60YDR486C TY1A-DR3Q12441 440 aa8.61□□□□□ -1.03
VPS60YDR486C YMR316C-AI2HB70 103 aa8.6□□□□□ -1.03
VPS60YDR486C PIS1P06197 220 aaKnown RBP8.6□□□□□ -1.03
VPS60YDR486C FEN2P25621 512 aaKnown RBP8.6□□□□□ -1.03
VPS60YDR486C LDS1P31379 325 aa8.6□□□□□ -1.03
VPS60YDR486C DAL3P32459 195 aa8.6□□□□□ -1.03
VPS60YDR486C ECM25P32525 599 aa8.6□□□□□ -1.03
VPS60YDR486C YAR068WP39564 161 aa8.6□□□□□ -1.03
VPS60YDR486C SMD3P43321 101 aaKnown RBP8.6□□□□□ -1.03
VPS60YDR486C RIB4P50861 169 aaPredicted RBP8.6□□□□□ -1.03
VPS60YDR486C YGR018CP53211 109 aa8.6□□□□□ -1.03
VPS60YDR486C PBP4Q07362 185 aaKnown RBP8.6□□□□□ -1.03
VPS60YDR486C IRC23Q08416 157 aa8.6□□□□□ -1.03
VPS60YDR486C Q0142Q9ZZW4 58 aa8.6□□□□□ -1.03
VPS60YDR486C YPS1P32329 569 aa8.59□□□□□ -1.03
VPS60YDR486C MRPL38P35996 138 aaPredicted RBP8.59□□□□□ -1.03
VPS60YDR486C RPL14AP36105 138 aaKnown RBP8.59□□□□□ -1.03
VPS60YDR486C RIB5P38145 238 aa8.59□□□□□ -1.03
VPS60YDR486C RPL14BP38754 138 aaKnown RBP8.59□□□□□ -1.03
VPS60YDR486C BDH1P39714 382 aa8.59□□□□□ -1.03
VPS60YDR486C CAF40P53829 373 aa8.59□□□□□ -1.03
VPS60YDR486C YCR022CP25620 114 aa8.58□□□□□ -1.04
VPS60YDR486C CSH1P38287 376 aa8.58□□□□□ -1.04
VPS60YDR486C DER1P38307 211 aa8.58□□□□□ -1.04
VPS60YDR486C PTC7P38797 343 aa8.58□□□□□ -1.04
VPS60YDR486C LST7P53237 242 aa8.58□□□□□ -1.04
VPS60YDR486C DOG2P38773 246 aa8.57□□□□□ -1.04
VPS60YDR486C DOG1P38774 246 aa8.57□□□□□ -1.04
VPS60YDR486C TIF11P38912 153 aaKnown RBP8.57□□□□□ -1.04
VPS60YDR486C PAU4P53427 120 aa8.57□□□□□ -1.04
VPS60YDR486C YML122CQ03207 126 aa8.57□□□□□ -1.04
VPS60YDR486C RXT3Q07458 294 aa8.57□□□□□ -1.04
VPS60YDR486C YOR352WQ08816 343 aa8.57□□□□□ -1.04
VPS60YDR486C SME1Q12330 94 aaPredicted RBP8.57□□□□□ -1.04
VPS60YDR486C MRP2P10663 115 aaPredicted RBP8.56□□□□□ -1.04
VPS60YDR486C INO2P26798 304 aa8.56□□□□□ -1.04
VPS60YDR486C PRS4P38063 326 aaPredicted RBP8.56□□□□□ -1.04
VPS60YDR486C CDS1P38221 457 aa8.56□□□□□ -1.04
VPS60YDR486C TAX4P47030 604 aa8.56□□□□□ -1.04
VPS60YDR486C ALK2P32789 676 aaPredicted RBP8.55□□□□□ -1.04
VPS60YDR486C YCR041WP37265 110 aa8.55□□□□□ -1.04
VPS60YDR486C AVT5P38176 459 aa8.55□□□□□ -1.04
VPS60YDR486C RRT1P38192 103 aa8.55□□□□□ -1.04
VPS60YDR486C YIL024CP40543 189 aa8.55□□□□□ -1.04
VPS60YDR486C DFR1P07807 211 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
VPS60YDR486C SAS2P40963 338 aa8.54□□□□□ -1.04
VPS60YDR486C ATG27P46989 271 aa8.54□□□□□ -1.04
VPS60YDR486C SWT21P53873 357 aaPredicted RBP8.54□□□□□ -1.04
VPS60YDR486C SPG4Q04438 115 aa8.54□□□□□ -1.04
VPS60YDR486C CDC7P06243 507 aa8.53□□□□□ -1.04
VPS60YDR486C PAU1P0CE88 120 aa8.53□□□□□ -1.04
VPS60YDR486C PAU14P0CE89 120 aa8.53□□□□□ -1.04
VPS60YDR486C PAU6P0CE90 120 aa8.53□□□□□ -1.04
VPS60YDR486C PAU18P0CE91 120 aa8.53□□□□□ -1.04
VPS60YDR486C PAU8P0CE92 120 aa8.53□□□□□ -1.04
VPS60YDR486C PAU11P0CE93 120 aa8.53□□□□□ -1.04
VPS60YDR486C PAU13P38725 120 aa8.53□□□□□ -1.04
VPS60YDR486C RTS2P40962 232 aa8.53□□□□□ -1.04
VPS60YDR486C DUG3P53871 357 aa8.53□□□□□ -1.04
VPS60YDR486C PAU10Q03050 120 aa8.53□□□□□ -1.04
VPS60YDR486C ATC1Q04005 294 aa8.53□□□□□ -1.04
VPS60YDR486C YMR253CQ04835 414 aa8.53□□□□□ -1.04
VPS60YDR486C PAU20Q08322 120 aa8.53□□□□□ -1.04
VPS60YDR486C PAU9Q3E770 120 aa8.53□□□□□ -1.04
VPS60YDR486C PCC1Q3E833 88 aa8.53□□□□□ -1.04
VPS60YDR486C TY1A-DR4O74302 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-AP0CX57 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-PR1P0CX58 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-ORP0CX59 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-PR2P0CX60 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-DR5P0CX65 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-ER2P0CX66 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-GR3P0CX67 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-LR1P0CX68 440 aa8.52□□□□□ -1.05
VPS60YDR486C TY1A-MR2P0CX69 440 aa8.52□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 97.6 ms