RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W NRK1P53915 240 aa0.79□□□□□ -2.28
VPS52YDR484W DIG2Q03373 323 aaKnown RBP0.79□□□□□ -2.28
VPS52YDR484W AIM34Q03673 198 aa0.79□□□□□ -2.28
VPS52YDR484W YER188C-AP0C0V2 99 aa0.78□□□□□ -2.28
VPS52YDR484W SHG1P38337 142 aa0.78□□□□□ -2.28
VPS52YDR484W GPI14P47088 403 aaKnown RBP0.78□□□□□ -2.28
VPS52YDR484W MET31Q03081 177 aa0.78□□□□□ -2.28
VPS52YDR484W PIR1Q03178 341 aa0.78□□□□□ -2.28
VPS52YDR484W RRP17Q04031 235 aaPredicted RBP0.78□□□□□ -2.28
VPS52YDR484W YDR391CQ04170 232 aa0.78□□□□□ -2.28
VPS52YDR484W MPD1Q12404 318 aaKnown RBP0.78□□□□□ -2.28
VPS52YDR484W MRPL15P36523 253 aa0.77□□□□□ -2.29
VPS52YDR484W FMP32P43557 207 aa0.77□□□□□ -2.29
VPS52YDR484W DAS2Q12084 232 aa0.77□□□□□ -2.29
VPS52YDR484W UBC8P28263 218 aa0.77□□□□□ -2.29
VPS52YDR484W AIM36Q03798 255 aa0.77□□□□□ -2.29
VPS52YDR484W ATP20Q12233 115 aa0.77□□□□□ -2.29
VPS52YDR484W DGK1Q12382 290 aa0.77□□□□□ -2.29
VPS52YDR484W STF2P16965 84 aa0.76□□□□□ -2.29
VPS52YDR484W AHC2P25649 128 aa0.76□□□□□ -2.29
VPS52YDR484W YBR242WP38331 238 aa0.76□□□□□ -2.29
VPS52YDR484W SBH1P52870 82 aa0.76□□□□□ -2.29
VPS52YDR484W GRX8Q05926 109 aa0.76□□□□□ -2.29
VPS52YDR484W SHH4Q06236 168 aa0.76□□□□□ -2.29
VPS52YDR484W YET3Q07451 203 aa0.76□□□□□ -2.29
VPS52YDR484W LCL2Q08045 131 aa0.76□□□□□ -2.29
VPS52YDR484W SEN2P16658 377 aa0.76□□□□□ -2.29
VPS52YDR484W AHT1P29589 182 aa0.76□□□□□ -2.29
VPS52YDR484W YBL010CP32788 280 aa0.76□□□□□ -2.29
VPS52YDR484W SBH2P52871 88 aa0.76□□□□□ -2.29
VPS52YDR484W HOP2P53187 214 aa0.76□□□□□ -2.29
VPS52YDR484W YLR422WQ06409 1932 aa0.75□□□□□ -2.29
VPS52YDR484W MAK5P38112 773 aaPredicted RBP0.75□□□□□ -2.29
VPS52YDR484W RRT1P38192 103 aa0.75□□□□□ -2.29
VPS52YDR484W YGL235WP53071 178 aa0.75□□□□□ -2.29
VPS52YDR484W YHP1Q04116 353 aa0.75□□□□□ -2.29
VPS52YDR484W YPR203WQ08994 102 aa0.75□□□□□ -2.29
VPS52YDR484W PST2Q12335 198 aaKnown RBP0.75□□□□□ -2.29
VPS52YDR484W YMR030W-AQ3E760 96 aa0.75□□□□□ -2.29
VPS52YDR484W MAK31P23059 88 aa0.74□□□□□ -2.29
VPS52YDR484W MPM1P40364 252 aa0.74□□□□□ -2.29
VPS52YDR484W NSE4P43124 402 aa0.74□□□□□ -2.29
VPS52YDR484W DML1Q03652 475 aa0.74□□□□□ -2.29
VPS52YDR484W FYV12Q08559 129 aa0.74□□□□□ -2.29
VPS52YDR484W SEC14P24280 304 aaKnown RBP0.74□□□□□ -2.29
VPS52YDR484W HSP30P25619 332 aa0.74□□□□□ -2.29
VPS52YDR484W YKL102CP34249 101 aa0.74□□□□□ -2.29
VPS52YDR484W VPS28Q02767 242 aa0.74□□□□□ -2.29
VPS52YDR484W GPI17Q04080 534 aa0.74□□□□□ -2.29
VPS52YDR484W GAL83Q04739 417 aa0.74□□□□□ -2.29
VPS52YDR484W UPS1Q05776 175 aa0.74□□□□□ -2.29
VPS52YDR484W TAR1Q8TGM6 124 aa0.74□□□□□ -2.29
VPS52YDR484W APA2P22108 325 aa0.73□□□□□ -2.29
VPS52YDR484W RFC2P40348 353 aa0.73□□□□□ -2.29
VPS52YDR484W SNO1Q03144 224 aa0.73□□□□□ -2.29
VPS52YDR484W HPT1Q04178 221 aaKnown RBP0.73□□□□□ -2.29
VPS52YDR484W BRX1Q08235 291 aaKnown RBP0.73□□□□□ -2.29
VPS52YDR484W ATG41Q12048 136 aa0.73□□□□□ -2.29
VPS52YDR484W GCY1P14065 312 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
VPS52YDR484W ATP7P30902 174 aa0.72□□□□□ -2.29
VPS52YDR484W YRA2P36036 203 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
VPS52YDR484W ETR1P38071 380 aa0.72□□□□□ -2.29
VPS52YDR484W YHL037CP38733 133 aa0.72□□□□□ -2.29
VPS52YDR484W NVJ1P38881 321 aa0.72□□□□□ -2.29
VPS52YDR484W HHT1P61830 136 aa0.72□□□□□ -2.29
VPS52YDR484W FIT1Q04433 528 aa0.72□□□□□ -2.29
VPS52YDR484W YOR214CQ12282 236 aa0.72□□□□□ -2.29
VPS52YDR484W CCS1P40202 249 aaKnown RBP0.72□□□□□ -2.29
VPS52YDR484W TIM13P53299 105 aa0.72□□□□□ -2.29
VPS52YDR484W GIM3P53900 129 aa0.72□□□□□ -2.29
VPS52YDR484W YKR005CQ02203 525 aa0.72□□□□□ -2.29
VPS52YDR484W GRX3Q03835 250 aa0.72□□□□□ -2.29
VPS52YDR484W YPR127WQ06494 345 aa0.72□□□□□ -2.29
VPS52YDR484W YKR041WP36134 250 aa0.71□□□□□ -2.3
VPS52YDR484W YFL051CP43552 160 aa0.71□□□□□ -2.3
VPS52YDR484W JAC1P53193 184 aa0.71□□□□□ -2.3
VPS52YDR484W ELP6Q04868 273 aa0.71□□□□□ -2.3
VPS52YDR484W YOR381W-AQ3E804 55 aa0.71□□□□□ -2.3
VPS52YDR484W UGX2P32772 223 aa0.7□□□□□ -2.3
VPS52YDR484W FYV4P38783 130 aaPredicted RBP0.7□□□□□ -2.3
VPS52YDR484W YIL102CP40488 101 aa0.7□□□□□ -2.3
VPS52YDR484W TRR1P29509 319 aaKnown RBP0.7□□□□□ -2.3
VPS52YDR484W CLG1P35190 452 aa0.7□□□□□ -2.3
VPS52YDR484W YNL200CP40165 246 aaKnown RBP0.7□□□□□ -2.3
VPS52YDR484W DCV1P43595 202 aa0.7□□□□□ -2.3
VPS52YDR484W XPT1P47165 209 aa0.7□□□□□ -2.3
VPS52YDR484W TTI2P47168 421 aa0.7□□□□□ -2.3
VPS52YDR484W RIM9Q04734 239 aa0.7□□□□□ -2.3
VPS52YDR484W DUR1,2P32528 1835 aaKnown RBP0.69□□□□□ -2.3
VPS52YDR484W RAD6P06104 172 aa0.69□□□□□ -2.3
VPS52YDR484W YAR064WP39563 99 aa0.69□□□□□ -2.3
VPS52YDR484W SEC72P39742 193 aaKnown RBP0.69□□□□□ -2.3
VPS52YDR484W POG1P40473 351 aa0.69□□□□□ -2.3
VPS52YDR484W MOB1P40484 314 aa0.69□□□□□ -2.3
VPS52YDR484W PLP1Q04004 230 aa0.69□□□□□ -2.3
VPS52YDR484W FMP49A0A023PZB3 126 aa0.68□□□□□ -2.3
VPS52YDR484W GLR1P41921 483 aaKnown RBP0.68□□□□□ -2.3
VPS52YDR484W CCW12Q12127 133 aa0.68□□□□□ -2.3
VPS52YDR484W PEX11Q12462 236 aa0.68□□□□□ -2.3
VPS52YDR484W PRE1P22141 198 aaKnown RBP0.68□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 122 ms