RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUR2	YDR297W	HMS2	P47175	358 aa		4.09	□□□□□ -1.75
SUR2	YDR297W	UBC12	P52491	188 aa		4.09	□□□□□ -1.75
SUR2	YDR297W	YGL230C	P53074	147 aa		4.09	□□□□□ -1.75
SUR2	YDR297W	PRM8	P53174	237 aa		4.09	□□□□□ -1.75
SUR2	YDR297W	MTM1	P53320	366 aa		4.09	□□□□□ -1.75
SUR2	YDR297W	SDC1	Q03323	175 aa		4.09	□□□□□ -1.75
SUR2	YDR297W	GRH1	Q04410	372 aa	Known RBP	4.09	□□□□□ -1.75
SUR2	YDR297W	PBP4	Q07362	185 aa	Known RBP	4.09	□□□□□ -1.75
SUR2	YDR297W	RDL2	Q08742	149 aa	Known RBP	4.09	□□□□□ -1.75
SUR2	YDR297W	YPL119C-A	Q3E751	87 aa		4.09	□□□□□ -1.75
SUR2	YDR297W	IGO2	Q9P305	131 aa		4.09	□□□□□ -1.75
SUR2	YDR297W	MRS1	P07266	363 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	BGL2	P15703	313 aa	Known RBP	4.08	□□□□□ -1.76
SUR2	YDR297W	CDC43	P18898	376 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	YCR007C	P25354	239 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	MXR2	P25566	168 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	MRPS5	P33759	307 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	TRR2	P38816	342 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	PRE5	P40302	234 aa	Known RBP	4.08	□□□□□ -1.76
SUR2	YDR297W	DLS1	P40366	167 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	YIL012W	P40551	113 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	TIR3	P40552	269 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	DAN1	P47178	298 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	BUL1	P48524	976 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	SBH1	P52870	82 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	MRH4	P53166	561 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	CPD1	P53314	239 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	YML018C	Q03730	393 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	HRI1	Q05905	244 aa	Known RBP	4.08	□□□□□ -1.76
SUR2	YDR297W	NAT3	Q06504	195 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	MMT2	Q08970	484 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	MCP1	Q12106	302 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	YLR126C	Q12288	251 aa		4.08	□□□□□ -1.76
SUR2	YDR297W	SME1	Q12330	94 aa	Predicted RBP	4.08	□□□□□ -1.76
SUR2	YDR297W	RPL13A	Q12690	199 aa	Predicted RBP	4.08	□□□□□ -1.76
SUR2	YDR297W	SGA1	P08019	549 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	RPL2A	P0CX45	254 aa	Known RBP	4.07	□□□□□ -1.76
SUR2	YDR297W	RPL2B	P0CX46	254 aa	Known RBP	4.07	□□□□□ -1.76
SUR2	YDR297W	TOA2	P32774	122 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	ECM15	P35195	104 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	LSM2	P38203	95 aa	Known RBP	4.07	□□□□□ -1.76
SUR2	YDR297W	MBA1	P38300	278 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	SPC25	P40014	221 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	RPL13B	P40212	199 aa	Known RBP	4.07	□□□□□ -1.76
SUR2	YDR297W	YIL152W	P40455	235 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	YIA6	P40556	373 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	EGT2	P42835	1041 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	SYF2	P53277	215 aa	Predicted RBP	4.07	□□□□□ -1.76
SUR2	YDR297W	SWS2	P53937	143 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	APJ1	P53940	528 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	GAL83	Q04739	417 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	FCY1	Q12178	158 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	YGK3	Q12222	375 aa	Predicted RBP	4.07	□□□□□ -1.76
SUR2	YDR297W	KTI11	Q3E840	82 aa		4.07	□□□□□ -1.76
SUR2	YDR297W	BEM2	P39960	2167 aa	Known RBP	4.06	□□□□□ -1.76
SUR2	YDR297W	BAR1	P12630	587 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	RPS2	P25443	254 aa	Known RBP	4.06	□□□□□ -1.76
SUR2	YDR297W	EMP24	P32803	203 aa	Known RBP	4.06	□□□□□ -1.76
SUR2	YDR297W	PMU1	P36069	295 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	YKR073C	P36153	106 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	IPT1	P38954	527 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	ISC1	P40015	477 aa	Known RBP	4.06	□□□□□ -1.76
SUR2	YDR297W	SNO3	P43544	222 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	MNN5	P46982	586 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	BET5	Q03630	159 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	INP1	Q03694	420 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	YMR166C	Q03829	368 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	THI74	Q04083	370 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	BSC1	Q12140	328 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	PRR2	Q12310	699 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	UTP23	Q12339	254 aa	Known RBP	4.06	□□□□□ -1.76
SUR2	YDR297W	COA6	Q3E846	104 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	ISD11	Q6Q560	94 aa		4.06	□□□□□ -1.76
SUR2	YDR297W	YEL009C-A	A0A023PZF2	135 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	OPI3	P05375	206 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	TFS1	P14306	219 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	QRI5	P32344	111 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	FMP46	P36141	133 aa	Known RBP	4.05	□□□□□ -1.76
SUR2	YDR297W	ARC40	P38328	384 aa	Known RBP	4.05	□□□□□ -1.76
SUR2	YDR297W	MDM31	P38880	579 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	YPL073C	P40323	161 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	YIL059C	P40520	121 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	SNM1	P40993	198 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	CIS3	P47001	227 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	LCB3	P47013	409 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	PCP1	P53259	346 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	GRX5	Q02784	150 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	VPS71	Q03433	280 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	UPS3	Q04006	179 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	YPR098C	Q06089	161 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	YLR042C	Q07990	161 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	YOR376W	Q08900	122 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	ORT1	Q12375	292 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	YLR412C-A	Q3E742	68 aa		4.05	□□□□□ -1.76
SUR2	YDR297W	CAP2	P13517	287 aa		4.04	□□□□□ -1.76
SUR2	YDR297W	UBC5	P15732	148 aa		4.04	□□□□□ -1.76
SUR2	YDR297W	MAK32	P23060	363 aa		4.04	□□□□□ -1.76
SUR2	YDR297W	RNQ1	P25367	405 aa		4.04	□□□□□ -1.76
SUR2	YDR297W	TIP1	P27654	210 aa	Predicted RBP	4.04	□□□□□ -1.76
SUR2	YDR297W	ZRT1	P32804	376 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 399.6 ms