RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C YER134CP40081 178 aa3.87□□□□□ -1.79
PRP28YDR243C OST2P46964 130 aa3.87□□□□□ -1.79
PRP28YDR243C UBC11P52492 156 aa3.87□□□□□ -1.79
PRP28YDR243C CDH1P53197 566 aa3.87□□□□□ -1.79
PRP28YDR243C YGR039WP53225 103 aa3.87□□□□□ -1.79
PRP28YDR243C TAM41P53230 385 aa3.87□□□□□ -1.79
PRP28YDR243C PAU12P53343 120 aa3.87□□□□□ -1.79
PRP28YDR243C AIM11P87275 137 aa3.87□□□□□ -1.79
PRP28YDR243C IZH1Q03419 316 aa3.87□□□□□ -1.79
PRP28YDR243C YMR082CQ04276 118 aa3.87□□□□□ -1.79
PRP28YDR243C YMR252CQ04814 134 aa3.87□□□□□ -1.79
PRP28YDR243C YPR098CQ06089 161 aa3.87□□□□□ -1.79
PRP28YDR243C NMA1Q06178 401 aaKnown RBP3.87□□□□□ -1.79
PRP28YDR243C HSP33Q08914 237 aaKnown RBP3.87□□□□□ -1.79
PRP28YDR243C YOR015WQ12169 119 aa3.87□□□□□ -1.79
PRP28YDR243C POC4Q12245 148 aaPredicted RBP3.87□□□□□ -1.79
PRP28YDR243C ATO3Q12359 275 aa3.87□□□□□ -1.79
PRP28YDR243C YPL229WQ99395 206 aa3.87□□□□□ -1.79
PRP28YDR243C URA5P13298 226 aaKnown RBP3.86□□□□□ -1.79
PRP28YDR243C GLN3P18494 730 aa3.86□□□□□ -1.79
PRP28YDR243C BET2P20133 325 aa3.86□□□□□ -1.79
PRP28YDR243C SRP21P32342 167 aa3.86□□□□□ -1.79
PRP28YDR243C RPL14AP36105 138 aaKnown RBP3.86□□□□□ -1.79
PRP28YDR243C EMC4P53073 190 aa3.86□□□□□ -1.79
PRP28YDR243C YIP5P53108 310 aa3.86□□□□□ -1.79
PRP28YDR243C CAB4P53332 305 aa3.86□□□□□ -1.79
PRP28YDR243C RAV2Q03956 351 aa3.86□□□□□ -1.79
PRP28YDR243C ENB1Q08299 606 aa3.86□□□□□ -1.79
PRP28YDR243C SOD2P00447 233 aa3.86□□□□□ -1.79
PRP28YDR243C RPS13P05756 151 aaKnown RBP3.86□□□□□ -1.79
PRP28YDR243C RPS16AP0CX51 143 aaKnown RBP3.86□□□□□ -1.79
PRP28YDR243C RPS16BP0CX52 143 aaKnown RBP3.86□□□□□ -1.79
PRP28YDR243C YMR31P19955 123 aa3.86□□□□□ -1.79
PRP28YDR243C TRX3P25372 127 aa3.86□□□□□ -1.79
PRP28YDR243C ERV1P27882 189 aa3.86□□□□□ -1.79
PRP28YDR243C PAU2P32612 120 aa3.86□□□□□ -1.79
PRP28YDR243C RPB11P38902 120 aa3.86□□□□□ -1.79
PRP28YDR243C TEM1P38987 245 aa3.86□□□□□ -1.79
PRP28YDR243C EFM6P53970 246 aa3.86□□□□□ -1.79
PRP28YDR243C YML079WQ03629 201 aa3.86□□□□□ -1.79
PRP28YDR243C FCF1Q05498 189 aaPredicted RBP3.86□□□□□ -1.79
PRP28YDR243C UTP23Q12339 254 aaKnown RBP3.86□□□□□ -1.79
PRP28YDR243C PCL9Q12477 304 aa3.86□□□□□ -1.79
PRP28YDR243C ATG40Q99325 256 aa3.86□□□□□ -1.79
PRP28YDR243C OPI3P05375 206 aa3.85□□□□□ -1.79
PRP28YDR243C CDC21P06785 304 aa3.85□□□□□ -1.79
PRP28YDR243C CHO1P08456 276 aa3.85□□□□□ -1.79
PRP28YDR243C PHO85P17157 305 aa3.85□□□□□ -1.79
PRP28YDR243C FUB1P25659 250 aa3.85□□□□□ -1.79
PRP28YDR243C ERG24P32462 438 aaKnown RBP3.85□□□□□ -1.79
PRP28YDR243C PRS4P38063 326 aaPredicted RBP3.85□□□□□ -1.79
PRP28YDR243C FLO5P38894 1075 aa3.85□□□□□ -1.79
PRP28YDR243C GZF3P42944 551 aaKnown RBP3.85□□□□□ -1.79
PRP28YDR243C YFR020WP43600 232 aa3.85□□□□□ -1.79
PRP28YDR243C LCB3P47013 409 aa3.85□□□□□ -1.79
PRP28YDR243C TOS2P50078 622 aa3.85□□□□□ -1.79
PRP28YDR243C SCW4P53334 386 aaKnown RBP3.85□□□□□ -1.79
PRP28YDR243C PGA1P53896 198 aa3.85□□□□□ -1.79
PRP28YDR243C ELP6Q04868 273 aa3.85□□□□□ -1.79
PRP28YDR243C UPS1Q05776 175 aa3.85□□□□□ -1.79
PRP28YDR243C HRT1Q08273 121 aa3.85□□□□□ -1.79
PRP28YDR243C UBA3Q99344 299 aa3.85□□□□□ -1.79
PRP28YDR243C Q0010Q9ZZX9 128 aa3.85□□□□□ -1.79
PRP28YDR243C ECM29P38737 1868 aa3.85□□□□□ -1.79
PRP28YDR243C YRF1-3P0CX14 1859 aa3.84□□□□□ -1.79
PRP28YDR243C YRF1-7P0CX15 1859 aa3.84□□□□□ -1.79
PRP28YDR243C YRF1-6P53819 1859 aa3.84□□□□□ -1.79
PRP28YDR243C HIP1P06775 603 aa3.84□□□□□ -1.79
PRP28YDR243C KRE1P17260 313 aa3.84□□□□□ -1.79
PRP28YDR243C RNQ1P25367 405 aa3.84□□□□□ -1.79
PRP28YDR243C PRE2P30656 287 aaKnown RBP3.84□□□□□ -1.79
PRP28YDR243C AIM26P32858 118 aa3.84□□□□□ -1.79
PRP28YDR243C IML3P38265 245 aa3.84□□□□□ -1.79
PRP28YDR243C YBR292CP38357 123 aa3.84□□□□□ -1.79
PRP28YDR243C YEA4P40004 342 aa3.84□□□□□ -1.79
PRP28YDR243C CWP2P43497 92 aa3.84□□□□□ -1.79
PRP28YDR243C RHO5P53879 331 aaKnown RBP3.84□□□□□ -1.79
PRP28YDR243C YMR320WQ04897 101 aa3.84□□□□□ -1.79
PRP28YDR243C STP4Q07351 490 aa3.84□□□□□ -1.79
PRP28YDR243C KTI11Q3E840 82 aa3.84□□□□□ -1.79
PRP28YDR243C PAU1P0CE88 120 aa3.84□□□□□ -1.8
PRP28YDR243C PAU14P0CE89 120 aa3.84□□□□□ -1.8
PRP28YDR243C PAU6P0CE90 120 aa3.84□□□□□ -1.8
PRP28YDR243C PAU18P0CE91 120 aa3.84□□□□□ -1.8
PRP28YDR243C PAU8P0CE92 120 aa3.84□□□□□ -1.8
PRP28YDR243C PAU11P0CE93 120 aa3.84□□□□□ -1.8
PRP28YDR243C YMC1P32331 307 aa3.84□□□□□ -1.8
PRP28YDR243C YGP1P38616 354 aaKnown RBP3.84□□□□□ -1.8
PRP28YDR243C PAU13P38725 120 aa3.84□□□□□ -1.8
PRP28YDR243C ECM14P38836 430 aa3.84□□□□□ -1.8
PRP28YDR243C XBP1P40489 647 aa3.84□□□□□ -1.8
PRP28YDR243C YFR045WP43617 309 aa3.84□□□□□ -1.8
PRP28YDR243C PAU4P53427 120 aa3.84□□□□□ -1.8
PRP28YDR243C PAU10Q03050 120 aa3.84□□□□□ -1.8
PRP28YDR243C FSH2Q05015 223 aa3.84□□□□□ -1.8
PRP28YDR243C YOL073CQ08232 322 aa3.84□□□□□ -1.8
PRP28YDR243C PAU20Q08322 120 aa3.84□□□□□ -1.8
PRP28YDR243C HNT3Q08702 217 aa3.84□□□□□ -1.8
PRP28YDR243C PEX11Q12462 236 aa3.84□□□□□ -1.8
PRP28YDR243C ZPS1Q12512 249 aa3.84□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms