RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C ANT1Q06497 328 aa2.55□□□□□ -2
RTN1YDR233C YLR236CA0A023PZG4 107 aa2.54□□□□□ -2
RTN1YDR233C KDX1P36005 433 aa2.54□□□□□ -2
RTN1YDR233C VMA22P38784 181 aa2.54□□□□□ -2
RTN1YDR233C SKI6P46948 246 aaPredicted RBP2.54□□□□□ -2
RTN1YDR233C UBC12P52491 188 aa2.54□□□□□ -2
RTN1YDR233C YOL162WP0CF19 215 aa2.53□□□□□ -2
RTN1YDR233C YGL010WP25338 174 aa2.53□□□□□ -2
RTN1YDR233C YBR209WP38311 105 aa2.53□□□□□ -2
RTN1YDR233C YBR220CP38318 560 aa2.53□□□□□ -2
RTN1YDR233C KNH1P50112 268 aa2.53□□□□□ -2
RTN1YDR233C ODC2Q99297 307 aa2.53□□□□□ -2
RTN1YDR233C ERJ5P43613 295 aaPredicted RBP2.52□□□□□ -2.01
RTN1YDR233C SAY1P53324 424 aa2.52□□□□□ -2.01
RTN1YDR233C YRF1-2P40105 1681 aa2.52□□□□□ -2.01
RTN1YDR233C TFC1P32367 649 aa2.51□□□□□ -2.01
RTN1YDR233C TMA19P35691 167 aaKnown RBP2.51□□□□□ -2.01
RTN1YDR233C PAN3P36102 679 aaPredicted RBP2.51□□□□□ -2.01
RTN1YDR233C FMP23P38231 175 aa2.51□□□□□ -2.01
RTN1YDR233C IGO2Q9P305 131 aa2.51□□□□□ -2.01
RTN1YDR233C RRP5Q05022 1729 aaKnown RBP2.51□□□□□ -2.01
RTN1YDR233C RPL2AP0CX45 254 aaKnown RBP2.5□□□□□ -2.01
RTN1YDR233C RPL2BP0CX46 254 aaKnown RBP2.5□□□□□ -2.01
RTN1YDR233C SPO13P23624 291 aa2.5□□□□□ -2.01
RTN1YDR233C YCR090CP25654 182 aaKnown RBP2.5□□□□□ -2.01
RTN1YDR233C UPS2P35200 230 aa2.5□□□□□ -2.01
RTN1YDR233C YEA4P40004 342 aa2.5□□□□□ -2.01
RTN1YDR233C SER2P42941 309 aa2.5□□□□□ -2.01
RTN1YDR233C YJR111CP47148 283 aaKnown RBP2.5□□□□□ -2.01
RTN1YDR233C FUS2Q05670 677 aa2.5□□□□□ -2.01
RTN1YDR233C RIO1Q12196 484 aaKnown RBP2.5□□□□□ -2.01
RTN1YDR233C POR1P04840 283 aaKnown RBP2.49□□□□□ -2.01
RTN1YDR233C RPL13BP40212 199 aaKnown RBP2.49□□□□□ -2.01
RTN1YDR233C ARO8P53090 500 aaKnown RBP2.49□□□□□ -2.01
RTN1YDR233C RPL13AQ12690 199 aaPredicted RBP2.49□□□□□ -2.01
RTN1YDR233C LYS2P07702 1392 aa2.49□□□□□ -2.01
RTN1YDR233C NUP49Q02199 472 aa2.48□□□□□ -2.01
RTN1YDR233C SEC11P15367 167 aa2.47□□□□□ -2.01
RTN1YDR233C CUE4Q04201 117 aaPredicted RBP2.47□□□□□ -2.01
RTN1YDR233C NOC4Q06512 552 aaPredicted RBP2.47□□□□□ -2.01
RTN1YDR233C DGA1Q08650 418 aa2.47□□□□□ -2.01
RTN1YDR233C RAD28Q12021 506 aa2.47□□□□□ -2.01
RTN1YDR233C APC1P53886 1748 aa2.47□□□□□ -2.01
RTN1YDR233C YER034WP40022 185 aaKnown RBP2.46□□□□□ -2.02
RTN1YDR233C PDS1P40316 373 aaPredicted RBP2.46□□□□□ -2.02
RTN1YDR233C RTC4P53850 401 aa2.46□□□□□ -2.02
RTN1YDR233C YOL024WQ08172 172 aa2.46□□□□□ -2.02
RTN1YDR233C TY4B-HP0C2J7 1802 aa2.46□□□□□ -2.02
RTN1YDR233C TY4B-JP47024 1803 aa2.46□□□□□ -2.02
RTN1YDR233C YAR023CD6VPM8 179 aa2.45□□□□□ -2.02
RTN1YDR233C SNF4P12904 322 aa2.45□□□□□ -2.02
RTN1YDR233C GIM3P53900 129 aa2.45□□□□□ -2.02
RTN1YDR233C NAT3Q06504 195 aa2.45□□□□□ -2.02
RTN1YDR233C YOL014WQ08110 124 aa2.45□□□□□ -2.02
RTN1YDR233C SNF2P22082 1703 aa2.45□□□□□ -2.02
RTN1YDR233C GPA2P10823 449 aa2.44□□□□□ -2.02
RTN1YDR233C FPR1P20081 114 aaKnown RBP2.44□□□□□ -2.02
RTN1YDR233C TAH1P25638 111 aaPredicted RBP2.44□□□□□ -2.02
RTN1YDR233C AIM2P39721 246 aa2.44□□□□□ -2.02
RTN1YDR233C YER134CP40081 178 aa2.44□□□□□ -2.02
RTN1YDR233C YMR099CQ03161 297 aaKnown RBP2.44□□□□□ -2.02
RTN1YDR233C DYN3Q04949 312 aa2.44□□□□□ -2.02
RTN1YDR233C NRK1P53915 240 aa2.43□□□□□ -2.02
RTN1YDR233C GRX8Q05926 109 aa2.43□□□□□ -2.02
RTN1YDR233C YLR031WQ07978 186 aa2.43□□□□□ -2.02
RTN1YDR233C GRE1Q08969 168 aa2.43□□□□□ -2.02
RTN1YDR233C URB1P34241 1764 aaKnown RBP2.43□□□□□ -2.02
RTN1YDR233C FKS3Q04952 1785 aa2.43□□□□□ -2.02
RTN1YDR233C MLP1Q02455 1875 aaKnown RBP2.42□□□□□ -2.02
RTN1YDR233C QCR8P08525 94 aa2.42□□□□□ -2.02
RTN1YDR233C TVP23P38962 199 aa2.42□□□□□ -2.02
RTN1YDR233C TDA4P47153 279 aa2.42□□□□□ -2.02
RTN1YDR233C HOP2P53187 214 aa2.42□□□□□ -2.02
RTN1YDR233C YML100W-AQ8TGT0 57 aa2.42□□□□□ -2.02
RTN1YDR233C CAF4P36130 643 aa2.41□□□□□ -2.02
RTN1YDR233C SNO1Q03144 224 aa2.41□□□□□ -2.02
RTN1YDR233C MZM1Q03429 123 aaPredicted RBP2.41□□□□□ -2.02
RTN1YDR233C YMR315WQ04869 349 aaKnown RBP2.41□□□□□ -2.02
RTN1YDR233C YDL180WQ12301 547 aa2.41□□□□□ -2.02
RTN1YDR233C SAC3P46674 1301 aa2.41□□□□□ -2.02
RTN1YDR233C PHO85P17157 305 aa2.4□□□□□ -2.03
RTN1YDR233C TVP38P36164 337 aa2.4□□□□□ -2.03
RTN1YDR233C MTW1P39731 289 aa2.4□□□□□ -2.03
RTN1YDR233C IRC23Q08416 157 aa2.4□□□□□ -2.03
RTN1YDR233C TRX3P25372 127 aa2.39□□□□□ -2.03
RTN1YDR233C ATP7P30902 174 aa2.39□□□□□ -2.03
RTN1YDR233C YKR041WP36134 250 aa2.39□□□□□ -2.03
RTN1YDR233C SHG1P38337 142 aa2.39□□□□□ -2.03
RTN1YDR233C YPL073CP40323 161 aa2.39□□□□□ -2.03
RTN1YDR233C YFL019CP43576 117 aa2.39□□□□□ -2.03
RTN1YDR233C MPA43P53583 542 aaPredicted RBP2.39□□□□□ -2.03
RTN1YDR233C ATG38Q05789 226 aaKnown RBP2.39□□□□□ -2.03
RTN1YDR233C YLR036CQ07986 203 aa2.39□□□□□ -2.03
RTN1YDR233C GCY1P14065 312 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
RTN1YDR233C YER076CP40049 302 aa2.38□□□□□ -2.03
RTN1YDR233C RNH202Q05635 350 aa2.38□□□□□ -2.03
RTN1YDR233C YDL085C-AQ3E7B7 68 aaKnown RBP2.38□□□□□ -2.03
RTN1YDR233C MGT1P26188 188 aa2.37□□□□□ -2.03
RTN1YDR233C PGA1P53896 198 aa2.37□□□□□ -2.03
RTN1YDR233C YMR295CQ03559 197 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms