RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS116	YDR194C	FEX2	Q08991	375 aa		4.14	□□□□□ -1.75
MSS116	YDR194C	WIP1	Q2V2P8	89 aa		4.14	□□□□□ -1.75
MSS116	YDR194C	NSP1	P14907	823 aa	Known RBP	4.13	□□□□□ -1.75
MSS116	YDR194C	SCM4	P32564	187 aa		4.13	□□□□□ -1.75
MSS116	YDR194C	SNC2	P33328	115 aa		4.13	□□□□□ -1.75
MSS116	YDR194C	DIG2	Q03373	323 aa	Known RBP	4.13	□□□□□ -1.75
MSS116	YDR194C	SLO1	Q3E784	85 aa		4.13	□□□□□ -1.75
MSS116	YDR194C	YIR035C	P40579	254 aa		4.13	□□□□□ -1.75
MSS116	YDR194C	YDR366C	P87287	132 aa		4.13	□□□□□ -1.75
MSS116	YDR194C	YDR278C	Q05612	105 aa		4.13	□□□□□ -1.75
MSS116	YDR194C	SBH1	P52870	82 aa		4.12	□□□□□ -1.75
MSS116	YDR194C	MRPS8	Q03799	155 aa		4.12	□□□□□ -1.75
MSS116	YDR194C	YDR114C	Q04597	100 aa		4.12	□□□□□ -1.75
MSS116	YDR194C	SCW10	Q04951	389 aa		4.12	□□□□□ -1.75
MSS116	YDR194C	ATP20	Q12233	115 aa		4.12	□□□□□ -1.75
MSS116	YDR194C	Q0144	Q9ZZW2	109 aa		4.12	□□□□□ -1.75
MSS116	YDR194C	SPT14	P32363	452 aa		4.11	□□□□□ -1.75
MSS116	YDR194C	YBR220C	P38318	560 aa		4.11	□□□□□ -1.75
MSS116	YDR194C	NSA2	P40078	261 aa	Known RBP	4.11	□□□□□ -1.75
MSS116	YDR194C	FSF1	Q12029	327 aa	Known RBP	4.11	□□□□□ -1.75
MSS116	YDR194C	ATP14	Q12349	124 aa		4.11	□□□□□ -1.75
MSS116	YDR194C	SOD1	P00445	154 aa	Known RBP	4.11	□□□□□ -1.75
MSS116	YDR194C	RPC19	P28000	142 aa	Known RBP	4.11	□□□□□ -1.75
MSS116	YDR194C	SPC25	P40014	221 aa		4.11	□□□□□ -1.75
MSS116	YDR194C	YGR219W	P53307	113 aa		4.11	□□□□□ -1.75
MSS116	YDR194C	SDH7	Q04401	133 aa		4.11	□□□□□ -1.75
MSS116	YDR194C	RSA4	P25382	515 aa	Known RBP	4.1	□□□□□ -1.75
MSS116	YDR194C	YJL218W	P40892	196 aa	Known RBP	4.1	□□□□□ -1.75
MSS116	YDR194C	YGL193C	P53097	103 aa		4.1	□□□□□ -1.75
MSS116	YDR194C	YKR005C	Q02203	525 aa		4.1	□□□□□ -1.75
MSS116	YDR194C	AGA2	P32781	87 aa		4.09	□□□□□ -1.75
MSS116	YDR194C	PTC1	P35182	281 aa		4.09	□□□□□ -1.75
MSS116	YDR194C	YGR039W	P53225	103 aa		4.09	□□□□□ -1.75
MSS116	YDR194C	HHO1	P53551	258 aa		4.09	□□□□□ -1.75
MSS116	YDR194C	YNR077C	P53758	84 aa		4.09	□□□□□ -1.75
MSS116	YDR194C	FRQ1	Q06389	190 aa		4.09	□□□□□ -1.75
MSS116	YDR194C	TRS20	P38334	175 aa		4.09	□□□□□ -1.76
MSS116	YDR194C	CUP9	P41817	306 aa		4.09	□□□□□ -1.76
MSS116	YDR194C	VPS28	Q02767	242 aa		4.09	□□□□□ -1.76
MSS116	YDR194C	YMR295C	Q03559	197 aa		4.09	□□□□□ -1.76
MSS116	YDR194C	HTD2	P38790	280 aa	Known RBP	4.08	□□□□□ -1.76
MSS116	YDR194C	SHH3	Q04487	196 aa		4.08	□□□□□ -1.76
MSS116	YDR194C	YMR253C	Q04835	414 aa		4.08	□□□□□ -1.76
MSS116	YDR194C	KRE1	P17260	313 aa		4.07	□□□□□ -1.76
MSS116	YDR194C	RPS1A	P33442	255 aa	Known RBP	4.07	□□□□□ -1.76
MSS116	YDR194C	RPS20	P38701	121 aa	Known RBP	4.07	□□□□□ -1.76
MSS116	YDR194C	YEL028W	P39989	153 aa		4.07	□□□□□ -1.76
MSS116	YDR194C	SLM2	P53955	656 aa		4.07	□□□□□ -1.76
MSS116	YDR194C	RPL26A	P05743	127 aa	Known RBP	4.07	□□□□□ -1.76
MSS116	YDR194C	HSP30	P25619	332 aa		4.07	□□□□□ -1.76
MSS116	YDR194C	YET1	P35723	206 aa		4.07	□□□□□ -1.76
MSS116	YDR194C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
MSS116	YDR194C	RPL26B	P53221	127 aa	Known RBP	4.07	□□□□□ -1.76
MSS116	YDR194C	YNR062C	P53748	327 aa		4.07	□□□□□ -1.76
MSS116	YDR194C	CGI121	Q03705	181 aa	Known RBP	4.07	□□□□□ -1.76
MSS116	YDR194C	SYM1	Q06563	197 aa		4.07	□□□□□ -1.76
MSS116	YDR194C	MRPL24	P36525	258 aa	Predicted RBP	4.06	□□□□□ -1.76
MSS116	YDR194C	RPL33B	P41056	107 aa	Known RBP	4.06	□□□□□ -1.76
MSS116	YDR194C	GPI2	P46961	280 aa		4.06	□□□□□ -1.76
MSS116	YDR194C	CNL1	Q06333	122 aa		4.06	□□□□□ -1.76
MSS116	YDR194C	RAD6	P06104	172 aa		4.05	□□□□□ -1.76
MSS116	YDR194C	PHO13	P19881	312 aa		4.05	□□□□□ -1.76
MSS116	YDR194C	FZF1	P32805	299 aa		4.05	□□□□□ -1.76
MSS116	YDR194C	PAM17	P36147	197 aa		4.05	□□□□□ -1.76
MSS116	YDR194C	RRT1	P38192	103 aa		4.05	□□□□□ -1.76
MSS116	YDR194C	YJR146W	P47174	117 aa		4.05	□□□□□ -1.76
MSS116	YDR194C	PRP11	Q07350	266 aa	Predicted RBP	4.05	□□□□□ -1.76
MSS116	YDR194C	YDR102C	Q03864	110 aa		4.05	□□□□□ -1.76
MSS116	YDR194C	SRP21	P32342	167 aa		4.04	□□□□□ -1.76
MSS116	YDR194C	YJL027C	P47063	138 aa	Predicted RBP	4.04	□□□□□ -1.76
MSS116	YDR194C	APS3	P47064	194 aa		4.04	□□□□□ -1.76
MSS116	YDR194C	TRM3	Q07527	1436 aa		4.04	□□□□□ -1.76
MSS116	YDR194C	SHB17	P36136	271 aa	Known RBP	4.03	□□□□□ -1.76
MSS116	YDR194C	ARL3	Q02804	198 aa		4.03	□□□□□ -1.76
MSS116	YDR194C	NKP2	Q06162	153 aa		4.03	□□□□□ -1.76
MSS116	YDR194C	SPC3	Q12133	184 aa		4.03	□□□□□ -1.76
MSS116	YDR194C	BOL2	P53082	120 aa		4.03	□□□□□ -1.76
MSS116	YDR194C	YDR391C	Q04170	232 aa		4.03	□□□□□ -1.76
MSS116	YDR194C	DUR1,2	P32528	1835 aa	Known RBP	4.03	□□□□□ -1.76
MSS116	YDR194C	SKI3	P17883	1432 aa	Known RBP	4.03	□□□□□ -1.76
MSS116	YDR194C	PHO85	P17157	305 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	TFC1	P32367	649 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	MRP49	P32388	137 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	YHR140W	P38842	239 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	VMA7	P39111	118 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	IRC23	Q08416	157 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	YIR021W-A	Q3E739	70 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	ATG40	Q99325	256 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	YER137C	P40083	148 aa	Known RBP	4.02	□□□□□ -1.77
MSS116	YDR194C	TIR3	P40552	269 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	YNL033W	P53964	284 aa		4.02	□□□□□ -1.77
MSS116	YDR194C	KIN28	P06242	306 aa		4.01	□□□□□ -1.77
MSS116	YDR194C	CIS3	P47001	227 aa		4.01	□□□□□ -1.77
MSS116	YDR194C	EST3	Q03096	181 aa		4.01	□□□□□ -1.77
MSS116	YDR194C	FCY1	Q12178	158 aa		4.01	□□□□□ -1.77
MSS116	YDR194C	FMP49	A0A023PZB3	126 aa		4	□□□□□ -1.77
MSS116	YDR194C	HYM1	P32464	399 aa		4	□□□□□ -1.77
MSS116	YDR194C	UGX2	P32772	223 aa		4	□□□□□ -1.77
MSS116	YDR194C	UTP11	P34247	250 aa	Predicted RBP	4	□□□□□ -1.77
MSS116	YDR194C	TVP23	P38962	199 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms