RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UFD2	YDL190C	SKG1	P36169	355 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	SPO73	P40031	143 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	HMF1	P40037	129 aa	Known RBP	0.99	□□□□□ -2.25
UFD2	YDL190C	ICE2	P40499	491 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	COG5	P53951	403 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	YDC1	Q02896	317 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	ARO80	Q04052	950 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	TRM12	Q04235	462 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	RDS3	Q06835	107 aa	Predicted RBP	0.99	□□□□□ -2.25
UFD2	YDL190C	YLR031W	Q07978	186 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	NSL1	Q12143	216 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	PEX11	Q12462	236 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	YIL046W-A	Q3E7Z4	54 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	REP2	P03872	296 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	RPL26A	P05743	127 aa	Known RBP	0.99	□□□□□ -2.25
UFD2	YDL190C	GRX2	P17695	143 aa	Known RBP	0.99	□□□□□ -2.25
UFD2	YDL190C	YKR041W	P36134	250 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	YJL144W	P47009	104 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	SNX4	P47057	423 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	YJR146W	P47174	117 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	DSK2	P48510	373 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	RPL26B	P53221	127 aa	Known RBP	0.99	□□□□□ -2.25
UFD2	YDL190C	YNL184C	P53876	108 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	MAK3	Q03503	176 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	YLR053C	Q12026	108 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.99	□□□□□ -2.25
UFD2	YDL190C	YFR032C-B	Q8TGU2	87 aa		0.99	□□□□□ -2.25
UFD2	YDL190C	YPR096C	O13587	100 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	MSW1	P04803	379 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	CMD1	P06787	147 aa	Known RBP	0.98	□□□□□ -2.25
UFD2	YDL190C	SCO1	P23833	295 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	SCM4	P32564	187 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	CLG1	P35190	452 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	NVJ1	P38881	321 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	YGR042W	P53227	271 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	NQM1	P53228	333 aa	Predicted RBP	0.98	□□□□□ -2.25
UFD2	YDL190C	SLM2	P53955	656 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	YPR127W	Q06494	345 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	MCP1	Q12106	302 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	STT4	P37297	1900 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	PRP8	P33334	2413 aa	Known RBP	0.98	□□□□□ -2.25
UFD2	YDL190C	PET54	P10834	293 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	SNF4	P12904	322 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	SEC14	P24280	304 aa	Known RBP	0.98	□□□□□ -2.25
UFD2	YDL190C	ARO7	P32178	256 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
UFD2	YDL190C	NUF2	P33895	451 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	EDC3	P39998	551 aa	Known RBP	0.98	□□□□□ -2.25
UFD2	YDL190C	GLE2	P40066	365 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	LSM4	P40070	187 aa	Known RBP	0.98	□□□□□ -2.25
UFD2	YDL190C	YDR249C	Q03787	373 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	DYN3	Q04949	312 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	SUE1	Q06524	206 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	MHT1	Q12525	324 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	MBF1	O14467	151 aa	Known RBP	0.98	□□□□□ -2.25
UFD2	YDL190C	BET1	P22804	142 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	CNB1	P25296	175 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	BUB2	P26448	306 aa	Predicted RBP	0.98	□□□□□ -2.25
UFD2	YDL190C	MNN5	P46982	586 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	UBC12	P52491	188 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	AIF1	P52923	378 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	YGL204C	P53089	101 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	COS6	P53344	381 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	HNT1	Q04344	158 aa	Known RBP	0.98	□□□□□ -2.25
UFD2	YDL190C	RDI1	Q12434	202 aa		0.98	□□□□□ -2.25
UFD2	YDL190C	URA5	P13298	226 aa	Known RBP	0.97	□□□□□ -2.25
UFD2	YDL190C	RPB3	P16370	318 aa	Known RBP	0.97	□□□□□ -2.25
UFD2	YDL190C	MED6	P38782	295 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	YHR180W	P38868	163 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	FMP32	P43557	207 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	SWP1	Q02795	286 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	YDR476C	Q03362	224 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	MIX17	Q03667	156 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	AIM34	Q03673	198 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	PLP1	Q04004	230 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	SPG3	Q04398	127 aa	Predicted RBP	0.97	□□□□□ -2.25
UFD2	YDL190C	NEJ1	Q06148	342 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	SHH4	Q06236	168 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	HRT1	Q08273	121 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	VPS68	Q12016	184 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	TIM9	O74700	87 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	PET9	P18239	318 aa	Known RBP	0.97	□□□□□ -2.25
UFD2	YDL190C	CKS1	P20486	150 aa	Known RBP	0.97	□□□□□ -2.25
UFD2	YDL190C	YCR090C	P25654	182 aa	Known RBP	0.97	□□□□□ -2.25
UFD2	YDL190C	SLM6	P38343	150 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	AGE2	P40529	298 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	ARO8	P53090	500 aa	Known RBP	0.97	□□□□□ -2.25
UFD2	YDL190C	HPT1	Q04178	221 aa	Known RBP	0.97	□□□□□ -2.25
UFD2	YDL190C	ATO3	Q12359	275 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	TSC3	Q3E790	80 aa		0.97	□□□□□ -2.25
UFD2	YDL190C	MRPS28	P21771	286 aa		0.96	□□□□□ -2.26
UFD2	YDL190C	IDP1	P21954	428 aa	Known RBP	0.96	□□□□□ -2.26
UFD2	YDL190C	YCR023C	P25351	611 aa		0.96	□□□□□ -2.26
UFD2	YDL190C	CLB6	P32943	380 aa		0.96	□□□□□ -2.26
UFD2	YDL190C	MRPL17	P36528	281 aa		0.96	□□□□□ -2.26
UFD2	YDL190C	CYC2	P38909	366 aa		0.96	□□□□□ -2.26
UFD2	YDL190C	ARP3	P47117	449 aa	Known RBP	0.96	□□□□□ -2.26
UFD2	YDL190C	MOG1	P47123	218 aa		0.96	□□□□□ -2.26
UFD2	YDL190C	YGR219W	P53307	113 aa		0.96	□□□□□ -2.26
UFD2	YDL190C	MPA43	P53583	542 aa	Predicted RBP	0.96	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms