RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C SKG1P36169 355 aa0.99□□□□□ -2.25
UFD2YDL190C SPO73P40031 143 aa0.99□□□□□ -2.25
UFD2YDL190C HMF1P40037 129 aaKnown RBP0.99□□□□□ -2.25
UFD2YDL190C ICE2P40499 491 aa0.99□□□□□ -2.25
UFD2YDL190C COG5P53951 403 aa0.99□□□□□ -2.25
UFD2YDL190C YDC1Q02896 317 aa0.99□□□□□ -2.25
UFD2YDL190C ARO80Q04052 950 aa0.99□□□□□ -2.25
UFD2YDL190C TRM12Q04235 462 aa0.99□□□□□ -2.25
UFD2YDL190C RDS3Q06835 107 aaPredicted RBP0.99□□□□□ -2.25
UFD2YDL190C YLR031WQ07978 186 aa0.99□□□□□ -2.25
UFD2YDL190C NSL1Q12143 216 aa0.99□□□□□ -2.25
UFD2YDL190C PEX11Q12462 236 aa0.99□□□□□ -2.25
UFD2YDL190C YIL046W-AQ3E7Z4 54 aa0.99□□□□□ -2.25
UFD2YDL190C REP2P03872 296 aa0.99□□□□□ -2.25
UFD2YDL190C RPL26AP05743 127 aaKnown RBP0.99□□□□□ -2.25
UFD2YDL190C GRX2P17695 143 aaKnown RBP0.99□□□□□ -2.25
UFD2YDL190C YKR041WP36134 250 aa0.99□□□□□ -2.25
UFD2YDL190C YJL144WP47009 104 aa0.99□□□□□ -2.25
UFD2YDL190C SNX4P47057 423 aa0.99□□□□□ -2.25
UFD2YDL190C YJR146WP47174 117 aa0.99□□□□□ -2.25
UFD2YDL190C DSK2P48510 373 aa0.99□□□□□ -2.25
UFD2YDL190C RPL26BP53221 127 aaKnown RBP0.99□□□□□ -2.25
UFD2YDL190C YNL184CP53876 108 aa0.99□□□□□ -2.25
UFD2YDL190C MAK3Q03503 176 aa0.99□□□□□ -2.25
UFD2YDL190C YLR053CQ12026 108 aa0.99□□□□□ -2.25
UFD2YDL190C YDL085C-AQ3E7B7 68 aaKnown RBP0.99□□□□□ -2.25
UFD2YDL190C YFR032C-BQ8TGU2 87 aa0.99□□□□□ -2.25
UFD2YDL190C YPR096CO13587 100 aa0.98□□□□□ -2.25
UFD2YDL190C MSW1P04803 379 aa0.98□□□□□ -2.25
UFD2YDL190C CMD1P06787 147 aaKnown RBP0.98□□□□□ -2.25
UFD2YDL190C SCO1P23833 295 aa0.98□□□□□ -2.25
UFD2YDL190C SCM4P32564 187 aa0.98□□□□□ -2.25
UFD2YDL190C CLG1P35190 452 aa0.98□□□□□ -2.25
UFD2YDL190C NVJ1P38881 321 aa0.98□□□□□ -2.25
UFD2YDL190C YGR042WP53227 271 aa0.98□□□□□ -2.25
UFD2YDL190C NQM1P53228 333 aaPredicted RBP0.98□□□□□ -2.25
UFD2YDL190C SLM2P53955 656 aa0.98□□□□□ -2.25
UFD2YDL190C YPR127WQ06494 345 aa0.98□□□□□ -2.25
UFD2YDL190C MCP1Q12106 302 aa0.98□□□□□ -2.25
UFD2YDL190C STT4P37297 1900 aa0.98□□□□□ -2.25
UFD2YDL190C PRP8P33334 2413 aaKnown RBP0.98□□□□□ -2.25
UFD2YDL190C PET54P10834 293 aa0.98□□□□□ -2.25
UFD2YDL190C SNF4P12904 322 aa0.98□□□□□ -2.25
UFD2YDL190C SEC14P24280 304 aaKnown RBP0.98□□□□□ -2.25
UFD2YDL190C ARO7P32178 256 aa0.98□□□□□ -2.25
UFD2YDL190C MDH3P32419 343 aaKnown RBP RIP-Chip data0.98□□□□□ -2.25not detected
UFD2YDL190C NUF2P33895 451 aa0.98□□□□□ -2.25
UFD2YDL190C EDC3P39998 551 aaKnown RBP0.98□□□□□ -2.25
UFD2YDL190C GLE2P40066 365 aa0.98□□□□□ -2.25
UFD2YDL190C LSM4P40070 187 aaKnown RBP0.98□□□□□ -2.25
UFD2YDL190C YDR249CQ03787 373 aa0.98□□□□□ -2.25
UFD2YDL190C DYN3Q04949 312 aa0.98□□□□□ -2.25
UFD2YDL190C SUE1Q06524 206 aa0.98□□□□□ -2.25
UFD2YDL190C MHT1Q12525 324 aa0.98□□□□□ -2.25
UFD2YDL190C MBF1O14467 151 aaKnown RBP0.98□□□□□ -2.25
UFD2YDL190C BET1P22804 142 aa0.98□□□□□ -2.25
UFD2YDL190C CNB1P25296 175 aa0.98□□□□□ -2.25
UFD2YDL190C BUB2P26448 306 aaPredicted RBP0.98□□□□□ -2.25
UFD2YDL190C MNN5P46982 586 aa0.98□□□□□ -2.25
UFD2YDL190C UBC12P52491 188 aa0.98□□□□□ -2.25
UFD2YDL190C AIF1P52923 378 aa0.98□□□□□ -2.25
UFD2YDL190C YGL204CP53089 101 aa0.98□□□□□ -2.25
UFD2YDL190C COS6P53344 381 aa0.98□□□□□ -2.25
UFD2YDL190C HNT1Q04344 158 aaKnown RBP0.98□□□□□ -2.25
UFD2YDL190C RDI1Q12434 202 aa0.98□□□□□ -2.25
UFD2YDL190C URA5P13298 226 aaKnown RBP0.97□□□□□ -2.25
UFD2YDL190C RPB3P16370 318 aaKnown RBP0.97□□□□□ -2.25
UFD2YDL190C MED6P38782 295 aa0.97□□□□□ -2.25
UFD2YDL190C YHR180WP38868 163 aa0.97□□□□□ -2.25
UFD2YDL190C FMP32P43557 207 aa0.97□□□□□ -2.25
UFD2YDL190C SWP1Q02795 286 aa0.97□□□□□ -2.25
UFD2YDL190C YDR476CQ03362 224 aa0.97□□□□□ -2.25
UFD2YDL190C MIX17Q03667 156 aa0.97□□□□□ -2.25
UFD2YDL190C AIM34Q03673 198 aa0.97□□□□□ -2.25
UFD2YDL190C PLP1Q04004 230 aa0.97□□□□□ -2.25
UFD2YDL190C SPG3Q04398 127 aaPredicted RBP0.97□□□□□ -2.25
UFD2YDL190C NEJ1Q06148 342 aa0.97□□□□□ -2.25
UFD2YDL190C SHH4Q06236 168 aa0.97□□□□□ -2.25
UFD2YDL190C HRT1Q08273 121 aa0.97□□□□□ -2.25
UFD2YDL190C VPS68Q12016 184 aa0.97□□□□□ -2.25
UFD2YDL190C TIM9O74700 87 aa0.97□□□□□ -2.25
UFD2YDL190C PET9P18239 318 aaKnown RBP0.97□□□□□ -2.25
UFD2YDL190C CKS1P20486 150 aaKnown RBP0.97□□□□□ -2.25
UFD2YDL190C YCR090CP25654 182 aaKnown RBP0.97□□□□□ -2.25
UFD2YDL190C SLM6P38343 150 aa0.97□□□□□ -2.25
UFD2YDL190C AGE2P40529 298 aa0.97□□□□□ -2.25
UFD2YDL190C ARO8P53090 500 aaKnown RBP0.97□□□□□ -2.25
UFD2YDL190C HPT1Q04178 221 aaKnown RBP0.97□□□□□ -2.25
UFD2YDL190C ATO3Q12359 275 aa0.97□□□□□ -2.25
UFD2YDL190C TSC3Q3E790 80 aa0.97□□□□□ -2.25
UFD2YDL190C MRPS28P21771 286 aa0.96□□□□□ -2.26
UFD2YDL190C IDP1P21954 428 aaKnown RBP0.96□□□□□ -2.26
UFD2YDL190C YCR023CP25351 611 aa0.96□□□□□ -2.26
UFD2YDL190C CLB6P32943 380 aa0.96□□□□□ -2.26
UFD2YDL190C MRPL17P36528 281 aa0.96□□□□□ -2.26
UFD2YDL190C CYC2P38909 366 aa0.96□□□□□ -2.26
UFD2YDL190C ARP3P47117 449 aaKnown RBP0.96□□□□□ -2.26
UFD2YDL190C MOG1P47123 218 aa0.96□□□□□ -2.26
UFD2YDL190C YGR219WP53307 113 aa0.96□□□□□ -2.26
UFD2YDL190C MPA43P53583 542 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms