RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C CUE4Q04201 117 aaPredicted RBP2.16□□□□□ -2.06
RRP42YDL111C YLR046CQ12253 270 aa2.16□□□□□ -2.06
RRP42YDL111C YOR214CQ12282 236 aa2.16□□□□□ -2.06
RRP42YDL111C MMS22Q06164 1454 aa2.15□□□□□ -2.06
RRP42YDL111C UBI4P0CG63 381 aaKnown RBP2.15□□□□□ -2.07
RRP42YDL111C PBI2P0CT04 75 aaKnown RBP2.15□□□□□ -2.07
RRP42YDL111C PHO85P17157 305 aa2.15□□□□□ -2.07
RRP42YDL111C IDP1P21954 428 aaKnown RBP2.15□□□□□ -2.07
RRP42YDL111C SLM6P38343 150 aa2.15□□□□□ -2.07
RRP42YDL111C GAA1P39012 614 aa2.15□□□□□ -2.07
RRP42YDL111C GLR1P41921 483 aaKnown RBP2.15□□□□□ -2.07
RRP42YDL111C SAY1P53324 424 aa2.15□□□□□ -2.07
RRP42YDL111C LSM3P57743 89 aaKnown RBP2.15□□□□□ -2.07
RRP42YDL111C BOL1Q3E793 110 aa2.15□□□□□ -2.07
RRP42YDL111C MDH2P22133 377 aa2.14□□□□□ -2.07
RRP42YDL111C NRG2P38082 220 aa2.14□□□□□ -2.07
RRP42YDL111C POP3P53833 195 aaPredicted RBP2.14□□□□□ -2.07
RRP42YDL111C BUD25P85052 153 aa2.14□□□□□ -2.07
RRP42YDL111C RRP17Q04031 235 aaPredicted RBP2.14□□□□□ -2.07
RRP42YDL111C YMR253CQ04835 414 aa2.14□□□□□ -2.07
RRP42YDL111C IRC23Q08416 157 aa2.14□□□□□ -2.07
RRP42YDL111C ATP20Q12233 115 aa2.14□□□□□ -2.07
RRP42YDL111C MET5P47169 1442 aa2.14□□□□□ -2.07
RRP42YDL111C SEC11P15367 167 aa2.13□□□□□ -2.07
RRP42YDL111C PAM17P36147 197 aa2.13□□□□□ -2.07
RRP42YDL111C FYV4P38783 130 aaPredicted RBP2.13□□□□□ -2.07
RRP42YDL111C TVP23P38962 199 aa2.13□□□□□ -2.07
RRP42YDL111C DLS1P40366 167 aa2.13□□□□□ -2.07
RRP42YDL111C APQ12P40532 138 aa2.13□□□□□ -2.07
RRP42YDL111C KNH1P50112 268 aa2.13□□□□□ -2.07
RRP42YDL111C VPS28Q02767 242 aa2.13□□□□□ -2.07
RRP42YDL111C GRX5Q02784 150 aa2.13□□□□□ -2.07
RRP42YDL111C YDC1Q02896 317 aa2.13□□□□□ -2.07
RRP42YDL111C GAL83Q04739 417 aa2.13□□□□□ -2.07
RRP42YDL111C SML1Q04964 104 aa2.13□□□□□ -2.07
RRP42YDL111C ANT1Q06497 328 aa2.13□□□□□ -2.07
RRP42YDL111C UFD4P33202 1483 aa2.13□□□□□ -2.07
RRP42YDL111C XRN1P22147 1528 aaKnown RBP2.12□□□□□ -2.07
RRP42YDL111C PET54P10834 293 aa2.12□□□□□ -2.07
RRP42YDL111C STP22P25604 385 aa2.12□□□□□ -2.07
RRP42YDL111C HSP30P25619 332 aa2.12□□□□□ -2.07
RRP42YDL111C TMA19P35691 167 aaKnown RBP2.12□□□□□ -2.07
RRP42YDL111C CSH1P38287 376 aa2.12□□□□□ -2.07
RRP42YDL111C PEP8P40335 379 aa2.12□□□□□ -2.07
RRP42YDL111C AYR1P40471 297 aa2.12□□□□□ -2.07
RRP42YDL111C SBH1P52870 82 aa2.12□□□□□ -2.07
RRP42YDL111C YNL033WP53964 284 aa2.12□□□□□ -2.07
RRP42YDL111C YKR005CQ02203 525 aa2.12□□□□□ -2.07
RRP42YDL111C DIG2Q03373 323 aaKnown RBP2.12□□□□□ -2.07
RRP42YDL111C PKR1Q03880 122 aaKnown RBP2.12□□□□□ -2.07
RRP42YDL111C YPR202WQ08993 238 aa2.12□□□□□ -2.07
RRP42YDL111C RAD28Q12021 506 aa2.12□□□□□ -2.07
RRP42YDL111C RPL2AP0CX45 254 aaKnown RBP2.11□□□□□ -2.07
RRP42YDL111C RPL2BP0CX46 254 aaKnown RBP2.11□□□□□ -2.07
RRP42YDL111C PEX34P25584 144 aa2.11□□□□□ -2.07
RRP42YDL111C UBC8P28263 218 aa2.11□□□□□ -2.07
RRP42YDL111C YBR220CP38318 560 aa2.11□□□□□ -2.07
RRP42YDL111C VMA22P38784 181 aa2.11□□□□□ -2.07
RRP42YDL111C ORM1P53224 222 aa2.11□□□□□ -2.07
RRP42YDL111C TOP2P06786 1428 aaKnown RBP2.1□□□□□ -2.07
RRP42YDL111C BUD4P47136 1447 aa2.1□□□□□ -2.07
RRP42YDL111C TRM732Q03496 1420 aa2.1□□□□□ -2.07
RRP42YDL111C RAD6P06104 172 aa2.1□□□□□ -2.07
RRP42YDL111C RPL30P14120 105 aaKnown RBP2.1□□□□□ -2.07
RRP42YDL111C CPR5P35176 225 aa2.1□□□□□ -2.07
RRP42YDL111C RRT1P38192 103 aa2.1□□□□□ -2.07
RRP42YDL111C HHT1P61830 136 aa2.1□□□□□ -2.07
RRP42YDL111C DAD4P69851 72 aa2.1□□□□□ -2.07
RRP42YDL111C RAV2Q03956 351 aa2.1□□□□□ -2.07
RRP42YDL111C YPR174CQ06616 221 aaPredicted RBP2.1□□□□□ -2.07
RRP42YDL111C YPD1Q07688 167 aa2.1□□□□□ -2.07
RRP42YDL111C FYV12Q08559 129 aa2.1□□□□□ -2.07
RRP42YDL111C SRB8P25648 1427 aa2.09□□□□□ -2.07
RRP42YDL111C SMC4Q12267 1418 aa2.09□□□□□ -2.07
RRP42YDL111C ATP5P09457 212 aa2.09□□□□□ -2.07
RRP42YDL111C SOK1P40317 901 aa2.09□□□□□ -2.07
RRP42YDL111C PRP11Q07350 266 aaPredicted RBP2.09□□□□□ -2.07
RRP42YDL111C YOR015WQ12169 119 aa2.09□□□□□ -2.07
RRP42YDL111C YLR419WQ06698 1435 aaKnown RBP2.08□□□□□ -2.08
RRP42YDL111C ACP1P32463 125 aa2.08□□□□□ -2.08
RRP42YDL111C SFK1P35735 353 aa2.08□□□□□ -2.08
RRP42YDL111C YAP3P38749 330 aa2.08□□□□□ -2.08
RRP42YDL111C IPI1P38803 334 aaPredicted RBP2.08□□□□□ -2.08
RRP42YDL111C RIO2P40160 425 aaKnown RBP2.08□□□□□ -2.08
RRP42YDL111C RNH202Q05635 350 aa2.08□□□□□ -2.08
RRP42YDL111C SYM1Q06563 197 aa2.08□□□□□ -2.08
RRP42YDL111C YPR013CQ12145 317 aa2.08□□□□□ -2.08
RRP42YDL111C YHR086W-AQ3E746 53 aa2.08□□□□□ -2.08
RRP42YDL111C MMS1Q06211 1407 aa2.08□□□□□ -2.08
RRP42YDL111C TRM3Q07527 1436 aa2.08□□□□□ -2.08
RRP42YDL111C YRA2P36036 203 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
RRP42YDL111C YEL073CP39974 107 aa2.07□□□□□ -2.08
RRP42YDL111C YPL073CP40323 161 aa2.07□□□□□ -2.08
RRP42YDL111C YOR381W-AQ3E804 55 aa2.07□□□□□ -2.08
RRP42YDL111C YOR1P53049 1477 aa2.07□□□□□ -2.08
RRP42YDL111C GSP2P32836 220 aaKnown RBP2.06□□□□□ -2.08
RRP42YDL111C UPS2P35200 230 aa2.06□□□□□ -2.08
RRP42YDL111C YER135CP40082 130 aa2.06□□□□□ -2.08
RRP42YDL111C FIP1P45976 327 aa2.06□□□□□ -2.08
RRP42YDL111C CCC1P47818 322 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms