RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A YMR253CQ04835 414 aa2.49□□□□□ -2.01
RIM1YCR028C-A PIN3Q06449 215 aa2.49□□□□□ -2.01
RIM1YCR028C-A HEM25Q07534 307 aa2.49□□□□□ -2.01
RIM1YCR028C-A IRC19Q07843 230 aa2.49□□□□□ -2.01
RIM1YCR028C-A YOR376WQ08900 122 aa2.49□□□□□ -2.01
RIM1YCR028C-A RAD28Q12021 506 aa2.49□□□□□ -2.01
RIM1YCR028C-A REX3Q12090 404 aa2.49□□□□□ -2.01
RIM1YCR028C-A MCP1Q12106 302 aa2.49□□□□□ -2.01
RIM1YCR028C-A AGC1Q12482 902 aa2.49□□□□□ -2.01
RIM1YCR028C-A UBA3Q99344 299 aa2.49□□□□□ -2.01
RIM1YCR028C-A STF1P01098 86 aa2.48□□□□□ -2.01
RIM1YCR028C-A MIR1P23641 311 aaKnown RBP2.48□□□□□ -2.01
RIM1YCR028C-A FAA1P30624 700 aaKnown RBP2.48□□□□□ -2.01
RIM1YCR028C-A SCM4P32564 187 aa2.48□□□□□ -2.01
RIM1YCR028C-A NTF2P33331 125 aaKnown RBP2.48□□□□□ -2.01
RIM1YCR028C-A ADH5P38113 351 aaKnown RBP2.48□□□□□ -2.01
RIM1YCR028C-A SLM6P38343 150 aa2.48□□□□□ -2.01
RIM1YCR028C-A HSP10P38910 106 aa2.48□□□□□ -2.01
RIM1YCR028C-A SMD3P43321 101 aaKnown RBP2.48□□□□□ -2.01
RIM1YCR028C-A BRR6P53062 197 aa2.48□□□□□ -2.01
RIM1YCR028C-A RNH201P53942 307 aa2.48□□□□□ -2.01
RIM1YCR028C-A YLR460CP54007 376 aa2.48□□□□□ -2.01
RIM1YCR028C-A PET191Q02772 108 aa2.48□□□□□ -2.01
RIM1YCR028C-A DIG2Q03373 323 aaKnown RBP2.48□□□□□ -2.01
RIM1YCR028C-A THI74Q04083 370 aa2.48□□□□□ -2.01
RIM1YCR028C-A CUE4Q04201 117 aaPredicted RBP2.48□□□□□ -2.01
RIM1YCR028C-A YMR090WQ04304 227 aaKnown RBP2.48□□□□□ -2.01
RIM1YCR028C-A AVO2Q04749 426 aa2.48□□□□□ -2.01
RIM1YCR028C-A YPR174CQ06616 221 aaPredicted RBP2.48□□□□□ -2.01
RIM1YCR028C-A MIM1Q08176 113 aa2.48□□□□□ -2.01
RIM1YCR028C-A YOL029CQ08187 201 aa2.48□□□□□ -2.01
RIM1YCR028C-A YOR015WQ12169 119 aa2.48□□□□□ -2.01
RIM1YCR028C-A FYV7Q12247 151 aa2.48□□□□□ -2.01
RIM1YCR028C-A YLR118CQ12354 227 aa2.48□□□□□ -2.01
RIM1YCR028C-A TDH3P00359 332 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
RIM1YCR028C-A SGA1P08019 549 aa2.47□□□□□ -2.01
RIM1YCR028C-A YSF3P0C074 85 aaPredicted RBP2.47□□□□□ -2.01
RIM1YCR028C-A PAU19P0CE85 124 aa2.47□□□□□ -2.01
RIM1YCR028C-A PAU21P0CE86 164 aa2.47□□□□□ -2.01
RIM1YCR028C-A PAU22P0CE87 164 aa2.47□□□□□ -2.01
RIM1YCR028C-A FUN14P18411 198 aa2.47□□□□□ -2.01
RIM1YCR028C-A YCR101CP25607 182 aa2.47□□□□□ -2.01
RIM1YCR028C-A PAU3P25610 124 aa2.47□□□□□ -2.01
RIM1YCR028C-A PPA2P28239 310 aa2.47□□□□□ -2.01
RIM1YCR028C-A ARO4P32449 370 aaKnown RBP2.47□□□□□ -2.01
RIM1YCR028C-A ALK2P32789 676 aaPredicted RBP2.47□□□□□ -2.01
RIM1YCR028C-A YKL075CP36083 450 aa2.47□□□□□ -2.01
RIM1YCR028C-A MRPL11P36521 249 aaPredicted RBP2.47□□□□□ -2.01
RIM1YCR028C-A MRPL15P36523 253 aa2.47□□□□□ -2.01
RIM1YCR028C-A MRPL28P36527 147 aa2.47□□□□□ -2.01
RIM1YCR028C-A YBR013CP38215 129 aa2.47□□□□□ -2.01
RIM1YCR028C-A NAS2P40555 220 aa2.47□□□□□ -2.01
RIM1YCR028C-A PHS1P40857 217 aa2.47□□□□□ -2.01
RIM1YCR028C-A MOB2P43563 287 aa2.47□□□□□ -2.01
RIM1YCR028C-A RPA34P47006 233 aaPredicted RBP2.47□□□□□ -2.01
RIM1YCR028C-A YGL185CP53100 379 aa2.47□□□□□ -2.01
RIM1YCR028C-A NSA1P53136 463 aaPredicted RBP2.47□□□□□ -2.01
RIM1YCR028C-A PAU4P53427 120 aa2.47□□□□□ -2.01
RIM1YCR028C-A HCH1P53834 153 aa2.47□□□□□ -2.01
RIM1YCR028C-A EOS1P53938 366 aa2.47□□□□□ -2.01
RIM1YCR028C-A YLR179CQ06252 201 aaKnown RBP2.47□□□□□ -2.01
RIM1YCR028C-A CTR3Q06686 241 aa2.47□□□□□ -2.01
RIM1YCR028C-A SME1Q12330 94 aaPredicted RBP2.47□□□□□ -2.01
RIM1YCR028C-A RAX2Q12465 1220 aa2.47□□□□□ -2.01
RIM1YCR028C-A YOR343CQ12484 108 aa2.47□□□□□ -2.01
RIM1YCR028C-A CDC28P00546 298 aaKnown RBP2.46□□□□□ -2.02
RIM1YCR028C-A RPL25P04456 142 aaKnown RBP2.46□□□□□ -2.02
RIM1YCR028C-A CDC36P06100 191 aaPredicted RBP2.46□□□□□ -2.02
RIM1YCR028C-A RPS14AP06367 137 aaKnown RBP2.46□□□□□ -2.02
RIM1YCR028C-A PAU1P0CE88 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU14P0CE89 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU6P0CE90 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU18P0CE91 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU8P0CE92 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU11P0CE93 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A NHP6AP11632 93 aaKnown RBP2.46□□□□□ -2.02
RIM1YCR028C-A ATG15P25641 520 aa2.46□□□□□ -2.02
RIM1YCR028C-A EHD3P28817 500 aa2.46□□□□□ -2.02
RIM1YCR028C-A DAD2P36162 133 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU13P38725 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A RPS14BP39516 138 aaKnown RBP2.46□□□□□ -2.02
RIM1YCR028C-A GLC8P41818 229 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU5P43575 122 aa2.46□□□□□ -2.02
RIM1YCR028C-A YJR012CP47087 207 aa2.46□□□□□ -2.02
RIM1YCR028C-A APS2Q00381 147 aa2.46□□□□□ -2.02
RIM1YCR028C-A CYT2Q00873 224 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU10Q03050 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A MRX11Q03079 207 aa2.46□□□□□ -2.02
RIM1YCR028C-A YMR082CQ04276 118 aa2.46□□□□□ -2.02
RIM1YCR028C-A YPR147CQ06522 304 aaKnown RBP2.46□□□□□ -2.02
RIM1YCR028C-A PAM18Q07914 168 aa2.46□□□□□ -2.02
RIM1YCR028C-A YLR030WQ07967 263 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU20Q08322 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A PAU9Q3E770 120 aa2.46□□□□□ -2.02
RIM1YCR028C-A YCL001W-BQ96VH2 84 aa2.46□□□□□ -2.02
RIM1YCR028C-A YDR157WA0A023PZE8 133 aa2.45□□□□□ -2.02
RIM1YCR028C-A ATP5P09457 212 aa2.45□□□□□ -2.02
RIM1YCR028C-A MDH2P22133 377 aa2.45□□□□□ -2.02
RIM1YCR028C-A UPS2P35200 230 aa2.45□□□□□ -2.02
RIM1YCR028C-A RPL14AP36105 138 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms