RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	NSP1	P14907	823 aa	Known RBP	3.52	□□□□□ -1.85
SMP1	YBR182C	SCM4	P32564	187 aa		3.52	□□□□□ -1.85
SMP1	YBR182C	RPS20	P38701	121 aa	Known RBP	3.52	□□□□□ -1.85
SMP1	YBR182C	YHL026C	P38740	315 aa		3.52	□□□□□ -1.85
SMP1	YBR182C	PIR5	P46999	287 aa		3.52	□□□□□ -1.85
SMP1	YBR182C	CAB4	P53332	305 aa		3.52	□□□□□ -1.85
SMP1	YBR182C	PRP11	Q07350	266 aa	Predicted RBP	3.52	□□□□□ -1.85
SMP1	YBR182C	POR1	P04840	283 aa	Known RBP	3.51	□□□□□ -1.85
SMP1	YBR182C	RPS23A	P0CX29	145 aa	Known RBP	3.51	□□□□□ -1.85
SMP1	YBR182C	RPS23B	P0CX30	145 aa		3.51	□□□□□ -1.85
SMP1	YBR182C	NSA2	P40078	261 aa	Known RBP	3.51	□□□□□ -1.85
SMP1	YBR182C	EAF6	P47128	113 aa		3.51	□□□□□ -1.85
SMP1	YBR182C	YMR295C	Q03559	197 aa		3.51	□□□□□ -1.85
SMP1	YBR182C	MRPL24	P36525	258 aa	Predicted RBP	3.51	□□□□□ -1.85
SMP1	YBR182C	YNL200C	P40165	246 aa	Known RBP	3.51	□□□□□ -1.85
SMP1	YBR182C	HPM1	P40481	377 aa		3.51	□□□□□ -1.85
SMP1	YBR182C	ERJ5	P43613	295 aa	Predicted RBP	3.51	□□□□□ -1.85
SMP1	YBR182C	YGR039W	P53225	103 aa		3.51	□□□□□ -1.85
SMP1	YBR182C	VPS28	Q02767	242 aa		3.51	□□□□□ -1.85
SMP1	YBR182C	ARL3	Q02804	198 aa		3.51	□□□□□ -1.85
SMP1	YBR182C	CNL1	Q06333	122 aa		3.51	□□□□□ -1.85
SMP1	YBR182C	YIR021W-A	Q3E739	70 aa		3.51	□□□□□ -1.85
SMP1	YBR182C	KIN28	P06242	306 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	TIR1	P10863	254 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	RSA4	P25382	515 aa	Known RBP	3.5	□□□□□ -1.85
SMP1	YBR182C	YET1	P35723	206 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	VMA7	P39111	118 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	CUP9	P41817	306 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	FIP1	P45976	327 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	SBH1	P52870	82 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	SHH3	Q04487	196 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	NKP2	Q06162	153 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	FCY1	Q12178	158 aa		3.5	□□□□□ -1.85
SMP1	YBR182C	TFC1	P32367	649 aa		3.49	□□□□□ -1.85
SMP1	YBR182C	YGR219W	P53307	113 aa		3.49	□□□□□ -1.85
SMP1	YBR182C	DIG2	Q03373	323 aa	Known RBP	3.49	□□□□□ -1.85
SMP1	YBR182C	YDR391C	Q04170	232 aa		3.49	□□□□□ -1.85
SMP1	YBR182C	FEX1	Q08913	375 aa		3.49	□□□□□ -1.85
SMP1	YBR182C	FEX2	Q08991	375 aa		3.49	□□□□□ -1.85
SMP1	YBR182C	FSF1	Q12029	327 aa	Known RBP	3.49	□□□□□ -1.85
SMP1	YBR182C	SNT2	P53127	1403 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	YOR304C-A	O14468	76 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	YBR220C	P38318	560 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	FYV4	P38783	130 aa	Predicted RBP	3.48	□□□□□ -1.85
SMP1	YBR182C	YHR180W	P38868	163 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	YER181C	P40097	107 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	GPI2	P46961	280 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	ALB1	P47019	175 aa	Predicted RBP	3.48	□□□□□ -1.85
SMP1	YBR182C	DOC1	P53068	250 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	YGL193C	P53097	103 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	SLM2	P53955	656 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	YKR005C	Q02203	525 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	CGI121	Q03705	181 aa	Known RBP	3.48	□□□□□ -1.85
SMP1	YBR182C	GAL83	Q04739	417 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	FYV12	Q08559	129 aa		3.48	□□□□□ -1.85
SMP1	YBR182C	RAD6	P06104	172 aa		3.47	□□□□□ -1.85
SMP1	YBR182C	SKI3	P17883	1432 aa	Known RBP	3.47	□□□□□ -1.85
SMP1	YBR182C	RPS1B	P23248	255 aa	Known RBP	3.47	□□□□□ -1.85
SMP1	YBR182C	MRP49	P32388	137 aa		3.47	□□□□□ -1.85
SMP1	YBR182C	UTP11	P34247	250 aa	Predicted RBP	3.47	□□□□□ -1.85
SMP1	YBR182C	SPC25	P40014	221 aa		3.47	□□□□□ -1.85
SMP1	YBR182C	YER084W	P40057	128 aa		3.47	□□□□□ -1.85
SMP1	YBR182C	AYR1	P40471	297 aa		3.47	□□□□□ -1.85
SMP1	YBR182C	ATO3	Q12359	275 aa		3.47	□□□□□ -1.85
SMP1	YBR182C	RPL26A	P05743	127 aa	Known RBP	3.46	□□□□□ -1.86
SMP1	YBR182C	SRP21	P32342	167 aa		3.46	□□□□□ -1.86
SMP1	YBR182C	HTD2	P38790	280 aa	Known RBP	3.46	□□□□□ -1.86
SMP1	YBR182C	RPL33B	P41056	107 aa	Known RBP	3.46	□□□□□ -1.86
SMP1	YBR182C	RPL26B	P53221	127 aa	Known RBP	3.46	□□□□□ -1.86
SMP1	YBR182C	YOR289W	Q12012	251 aa	Predicted RBP	3.46	□□□□□ -1.86
SMP1	YBR182C	SPC3	Q12133	184 aa		3.46	□□□□□ -1.86
SMP1	YBR182C	TRM3	Q07527	1436 aa		3.45	□□□□□ -1.86
SMP1	YBR182C	PHO85	P17157	305 aa		3.45	□□□□□ -1.86
SMP1	YBR182C	UGX2	P32772	223 aa		3.45	□□□□□ -1.86
SMP1	YBR182C	GSP1	P32835	219 aa	Known RBP	3.45	□□□□□ -1.86
SMP1	YBR182C	GSP2	P32836	220 aa	Known RBP	3.45	□□□□□ -1.86
SMP1	YBR182C	PTC1	P35182	281 aa		3.45	□□□□□ -1.86
SMP1	YBR182C	MPC3	P53311	146 aa		3.45	□□□□□ -1.86
SMP1	YBR182C	APS2	Q00381	147 aa		3.45	□□□□□ -1.86
SMP1	YBR182C	GRX5	Q02784	150 aa		3.45	□□□□□ -1.86
SMP1	YBR182C	YMR253C	Q04835	414 aa		3.45	□□□□□ -1.86
SMP1	YBR182C	ATP20	Q12233	115 aa		3.45	□□□□□ -1.86
SMP1	YBR182C	TOP2	P06786	1428 aa	Known RBP	3.44	□□□□□ -1.86
SMP1	YBR182C	FMP49	A0A023PZB3	126 aa		3.44	□□□□□ -1.86
SMP1	YBR182C	SOD1	P00445	154 aa	Known RBP	3.44	□□□□□ -1.86
SMP1	YBR182C	KRE1	P17260	313 aa		3.44	□□□□□ -1.86
SMP1	YBR182C	SPT14	P32363	452 aa		3.44	□□□□□ -1.86
SMP1	YBR182C	CIS3	P47001	227 aa		3.44	□□□□□ -1.86
SMP1	YBR182C	RUB1	Q03919	77 aa		3.44	□□□□□ -1.86
SMP1	YBR182C	BOL1	Q3E793	110 aa		3.44	□□□□□ -1.86
SMP1	YBR182C	YNL277W-A	Q3E7Z0	62 aa		3.44	□□□□□ -1.86
SMP1	YBR182C	RGI1	P40043	161 aa	Predicted RBP	3.43	□□□□□ -1.86
SMP1	YBR182C	YER135C	P40082	130 aa		3.43	□□□□□ -1.86
SMP1	YBR182C	YNR062C	P53748	327 aa		3.43	□□□□□ -1.86
SMP1	YBR182C	SYM1	Q06563	197 aa		3.43	□□□□□ -1.86
SMP1	YBR182C	LDB18	Q07887	179 aa		3.43	□□□□□ -1.86
SMP1	YBR182C	SUI1	P32911	108 aa	Known RBP	3.42	□□□□□ -1.86
SMP1	YBR182C	TVP23	P38962	199 aa		3.42	□□□□□ -1.86
SMP1	YBR182C	YEL028W	P39989	153 aa		3.42	□□□□□ -1.86
SMP1	YBR182C	RIO2	P40160	425 aa	Known RBP	3.42	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 74 ms