RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	CTF19	Q02732	369 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	MRPL1	Q04599	285 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	YPR114W	Q06107	315 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	TGS1	Q12052	315 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	USV1	Q12132	391 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	FOL3	Q12676	427 aa	Predicted RBP	3.47	□□□□□ -1.85
PIM1	YBL022C	URA5	P13298	226 aa	Known RBP	3.47	□□□□□ -1.85
PIM1	YBL022C	URK1	P27515	501 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
PIM1	YBL022C	NIT1	P40447	199 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	YAR1	P46683	200 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	COQ5	P49017	307 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	YNR040W	P53736	256 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	SUR7	P54003	302 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	ATG33	Q06485	197 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	MSA1	Q08471	629 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	RPS22B	Q3E7Y3	130 aa	Known RBP	3.47	□□□□□ -1.85
PIM1	YBL022C	SEC4	P07560	215 aa	Known RBP	3.47	□□□□□ -1.85
PIM1	YBL022C	ERG8	P24521	451 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	SHB17	P36136	271 aa	Known RBP	3.47	□□□□□ -1.85
PIM1	YBL022C	YHL026C	P38740	315 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	YNL200C	P40165	246 aa	Known RBP	3.47	□□□□□ -1.85
PIM1	YBL022C	MRPL51	Q06090	140 aa	Predicted RBP	3.47	□□□□□ -1.85
PIM1	YBL022C	MCP1	Q12106	302 aa		3.47	□□□□□ -1.85
PIM1	YBL022C	ANB1	P19211	157 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	MSN1	P22148	382 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	ECM34	P38728	170 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	YLR152C	P54072	576 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	APS2	Q00381	147 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	VPS71	Q03433	280 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	HPF1	Q05164	967 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	YBR090C	P38253	122 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	TUB4	P53378	473 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	SUN4	P53616	420 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	PDR16	P53860	351 aa	Known RBP	3.46	□□□□□ -1.86
PIM1	YBL022C	YOR378W	Q08902	515 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	YLR363W-A	Q3E747	85 aa		3.46	□□□□□ -1.86
PIM1	YBL022C	YGL010W	P25338	174 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	YCR023C	P25351	611 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	SPG5	P42933	373 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	DUO1	P53168	247 aa	Known RBP	3.45	□□□□□ -1.86
PIM1	YBL022C	YLR050C	Q12155	161 aa	Known RBP	3.45	□□□□□ -1.86
PIM1	YBL022C	SOD1	P00445	154 aa	Known RBP	3.45	□□□□□ -1.86
PIM1	YBL022C	PCL5	P38794	229 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	PDR17	P53844	350 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	ERF2	Q06551	359 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	AYT1	Q12226	474 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	YLR365W	Q7LIF2	110 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	UBA3	Q99344	299 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	YOR304C-A	O14468	76 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	RPL12A	P0CX53	165 aa	Known RBP	3.45	□□□□□ -1.86
PIM1	YBL022C	RPL12B	P0CX54	165 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	YBL059W	P34224	193 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	CMC1	P36064	111 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	PAM17	P36147	197 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	YEL067C	P39978	195 aa		3.45	□□□□□ -1.86
PIM1	YBL022C	PRP11	Q07350	266 aa	Predicted RBP	3.45	□□□□□ -1.86
PIM1	YBL022C	ADH1	P00330	348 aa	Known RBP	3.44	□□□□□ -1.86
PIM1	YBL022C	POX1	P13711	748 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	CTA1	P15202	515 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	TRM7	P38238	310 aa	Known RBP	3.44	□□□□□ -1.86
PIM1	YBL022C	YIL161W	P40449	235 aa	Known RBP	3.44	□□□□□ -1.86
PIM1	YBL022C	YMR074C	Q04773	145 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	YFH1	Q07540	174 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	YOL024W	Q08172	172 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	ADK2	P26364	225 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	SGE1	P33335	543 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	YAF9	P53930	226 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	BNA1	P47096	177 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	CAB4	P53332	305 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	YPR064W	Q12492	139 aa		3.44	□□□□□ -1.86
PIM1	YBL022C	UGX2	P32772	223 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	VBA2	P38358	474 aa	Known RBP	3.43	□□□□□ -1.86
PIM1	YBL022C	YER121W	P40076	114 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	YNL208W	P40159	199 aa	Known RBP	3.43	□□□□□ -1.86
PIM1	YBL022C	APQ12	P40532	138 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	MSL1	P40567	111 aa	Predicted RBP	3.43	□□□□□ -1.86
PIM1	YBL022C	YFL065C	P43539	102 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	YIP3	P53633	176 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	DYN2	Q02647	92 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	YPR098C	Q06089	161 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	MCH4	Q08268	501 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	YPR203W	Q08994	102 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	YDR215C	Q12240	137 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	YPR108W-A	Q3E7B3	70 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	MRS1	P07266	363 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	LSM2	P38203	95 aa	Known RBP	3.43	□□□□□ -1.86
PIM1	YBL022C	YHR138C	P38841	114 aa	Predicted RBP	3.43	□□□□□ -1.86
PIM1	YBL022C	RPB11	P38902	120 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	UPS1	Q05776	175 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	FIT3	Q08907	204 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	SME1	Q12330	94 aa	Predicted RBP	3.43	□□□□□ -1.86
PIM1	YBL022C	YDR119W-A	Q2V2P9	66 aa		3.43	□□□□□ -1.86
PIM1	YBL022C	RPS28B	P0C0X0	67 aa	Known RBP	3.42	□□□□□ -1.86
PIM1	YBL022C	HYP2	P23301	157 aa	Known RBP	3.42	□□□□□ -1.86
PIM1	YBL022C	ERV1	P27882	189 aa		3.42	□□□□□ -1.86
PIM1	YBL022C	YGL015C	P33199	130 aa		3.42	□□□□□ -1.86
PIM1	YBL022C	DOG2	P38773	246 aa		3.42	□□□□□ -1.86
PIM1	YBL022C	SAS2	P40963	338 aa		3.42	□□□□□ -1.86
PIM1	YBL022C	OST2	P46964	130 aa		3.42	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms