RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 DLATP10515 647 aaKnown RBP20.61■□□□□ 0.89
USP11-205ENST00000467378 NFKBIBQ15653 356 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 SKOR2Q2VWA4 1001 aaPredicted RBP20.61■□□□□ 0.89
USP11-205ENST00000467378 C9orf57Q5W0N0 161 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 SCARA3Q6AZY7 606 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 FAM186BQ8IYM0 893 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 C1orf127Q8N9H9 656 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 CXorf38Q8TB03 319 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 TMC2Q8TDI7 906 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 SYAP1Q96A49 352 aaPredicted RBP20.61■□□□□ 0.89
USP11-205ENST00000467378 STK39Q9UEW8 545 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 CACNA1IQ9P0X4 2223 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 ACACBO00763 2458 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 LRRIQ3A6PVS8 624 aaPredicted RBP20.6■□□□□ 0.89
USP11-205ENST00000467378 SOD2P04179 222 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 SP9P0CG40 484 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 CTSAP10619 480 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 TNNI1P19237 187 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 BRCC3P46736 316 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 DLG4P78352 724 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 ENPEPQ07075 957 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 DUOXA2Q1HG44 320 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 C1orf220Q5T0J3 134 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 SASS6Q6UVJ0 657 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 FILIP1Q7Z7B0 1213 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 PPFIBP1Q86W92 1011 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 ANKRD36BP1Q96IX9 119 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 CEP63Q96MT8 703 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 HERC2P3Q9BVR0 1158 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 MTMR12Q9C0I1 747 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 TBC1D17Q9HA65 648 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 IRAK3Q9Y616 596 aa20.6■□□□□ 0.89
USP11-205ENST00000467378 SPTBN2O15020 2390 aa20.59■□□□□ 0.89
USP11-205ENST00000467378 SLC16A3O15427 465 aaKnown RBP20.59■□□□□ 0.89
USP11-205ENST00000467378 DCNP07585 359 aaKnown RBP20.59■□□□□ 0.89
USP11-205ENST00000467378 TMEM191BP0C7N4 346 aa20.59■□□□□ 0.89
USP11-205ENST00000467378 VAMP7P51809 220 aa20.59■□□□□ 0.89
USP11-205ENST00000467378 CT47A1Q5JQC4 288 aaPredicted RBP20.59■□□□□ 0.89
USP11-205ENST00000467378 INTS8Q75QN2 995 aaKnown RBP20.59■□□□□ 0.89
USP11-205ENST00000467378 RSAD2Q8WXG1 361 aa20.59■□□□□ 0.89
USP11-205ENST00000467378 CHST7Q9NS84 486 aa20.59■□□□□ 0.89
USP11-205ENST00000467378 DACH1Q9UI36 760 aa20.59■□□□□ 0.89
USP11-205ENST00000467378 SIX4Q9UIU6 781 aa20.59■□□□□ 0.89
USP11-205ENST00000467378 ITGA11Q9UKX5 1188 aa20.59■□□□□ 0.89
USP11-205ENST00000467378 SF3B1O75533 1304 aaKnown RBP eCLIP20.58■□□□□ 0.894e-7■■■■■ 86.2
USP11-205ENST00000467378 TNNC2P02585 160 aa20.58■□□□□ 0.89
USP11-205ENST00000467378 C4BPAP04003 597 aaKnown RBP20.58■□□□□ 0.89
USP11-205ENST00000467378 ITGB3P05106 788 aa20.58■□□□□ 0.89
USP11-205ENST00000467378 EPB41P11171 864 aaKnown RBP20.58■□□□□ 0.89
USP11-205ENST00000467378 ERCC5P28715 1186 aaPredicted RBP20.58■□□□□ 0.89
USP11-205ENST00000467378 GBP2P32456 591 aaPredicted RBP20.58■□□□□ 0.89
USP11-205ENST00000467378 AARSP49588 968 aaKnown RBP eCLIP20.58■□□□□ 0.89
USP11-205ENST00000467378 ELAVL2Q12926 359 aaKnown RBP20.58■□□□□ 0.89
USP11-205ENST00000467378 BFSP1Q12934 665 aa20.58■□□□□ 0.89
USP11-205ENST00000467378 KIAA0319Q5VV43 1072 aa20.58■□□□□ 0.89
USP11-205ENST00000467378 TRAPPC11Q7Z392 1133 aa20.58■□□□□ 0.89
USP11-205ENST00000467378 CSGALNACT2Q8N6G5 542 aa20.58■□□□□ 0.89
USP11-205ENST00000467378 SRRTQ9BXP5 876 aaKnown RBP20.58■□□□□ 0.89
USP11-205ENST00000467378 AGAP1Q9UPQ3 857 aa20.58■□□□□ 0.89
USP11-205ENST00000467378 DOCK8Q8NF50 2099 aa20.58■□□□□ 0.88
USP11-205ENST00000467378 I3L4J1 428 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 IKBKBO14920 756 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 SPTLC1O15269 473 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 LILRB3O75022 631 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 CST3P01034 146 aaPredicted RBP20.57■□□□□ 0.88
USP11-205ENST00000467378 KRT13P13646 458 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 FGFR3P22607 806 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 KLRC2P26717 231 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 AP3M2P53677 418 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 LILRA4P59901 499 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 USP41Q3LFD5 358 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 FAM171A1Q5VUB5 890 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 SUSD3Q96L08 255 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 B3GALT6Q96L58 329 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 ANO10Q9NW15 660 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 NUB1Q9Y5A7 615 aa20.57■□□□□ 0.88
USP11-205ENST00000467378 M0QZQ0 153 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 TRAPPC3O43617 180 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 LETM1O95202 739 aaPredicted RBP20.56■□□□□ 0.88
USP11-205ENST00000467378 PAX3P23760 479 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 POLR2BP30876 1174 aaKnown RBP20.56■□□□□ 0.88
USP11-205ENST00000467378 RBP5P82980 135 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 DSG1Q02413 1049 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 PTPN14Q15678 1187 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 STX1AQ16623 288 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 USP37Q86T82 979 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 C1orf210Q8IVY1 113 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 NCDNQ9UBB6 729 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 SIT1Q9Y3P8 196 aa20.56■□□□□ 0.88
USP11-205ENST00000467378 TSC2P49815 1807 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 CACNA1GO43497 2377 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 KRT19P08727 400 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 TRIM49P0CI25 452 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 TRIM49CP0CI26 452 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 GLUD2P49448 558 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 TAF6P49848 677 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 TYRO3Q06418 890 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 PPP3CAQ08209 521 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 RTP2Q5QGT7 225 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms