RNA–Protein interactions for RNA: YPL153C

RAD53, Transcript of DNA damage response protein kinase, yeast

Gene RAD53, Length 2,466 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD53	YPL153C	SDT1	P53078	280 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	YGR039W	P53225	103 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	VPS71	Q03433	280 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	YDR209C	Q03480	137 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	YDR344C	Q05510	147 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	YDL218W	Q07629	317 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	YPQ1	Q12010	308 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
RAD53	YPL153C	MXR2	P25566	168 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	COX13	P32799	129 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	SOR1	P35497	357 aa	Known RBP	4.56	□□□□□ -1.68
RAD53	YPL153C	FMP46	P36141	133 aa	Known RBP	4.56	□□□□□ -1.68
RAD53	YPL153C	HMF1	P40037	129 aa	Known RBP	4.56	□□□□□ -1.68
RAD53	YPL153C	VMA21	P41806	77 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	HEM25	Q07534	307 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	SOR2	Q07786	357 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	HUT1	Q12520	339 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	IGO2	Q9P305	131 aa		4.56	□□□□□ -1.68
RAD53	YPL153C	ADH1	P00330	348 aa	Known RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	SIR2	P06700	562 aa		4.55	□□□□□ -1.68
RAD53	YPL153C	SEC4	P07560	215 aa	Known RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	RPS25B	P0C0T4	108 aa	Known RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	PBI2	P0CT04	75 aa	Known RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	MRPL20	P22354	195 aa	Predicted RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	ECM15	P35195	104 aa		4.55	□□□□□ -1.68
RAD53	YPL153C	PAM16	P42949	149 aa		4.55	□□□□□ -1.68
RAD53	YPL153C	HST4	P53688	370 aa		4.55	□□□□□ -1.68
RAD53	YPL153C	RSM10	Q03201	203 aa		4.55	□□□□□ -1.68
RAD53	YPL153C	PBP4	Q07362	185 aa	Known RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	SNX3	Q08826	162 aa	Known RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	RPS25A	Q3E792	108 aa	Predicted RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	GAR1	P28007	205 aa	Known RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	YBL081W	P38180	368 aa	Known RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	PRM5	P40476	318 aa		4.55	□□□□□ -1.68
RAD53	YPL153C	SCW11	P53189	542 aa		4.55	□□□□□ -1.68
RAD53	YPL153C	YLR049C	Q12110	428 aa		4.55	□□□□□ -1.68
RAD53	YPL153C	YNL277W-A	Q3E7Z0	62 aa		4.55	□□□□□ -1.68
RAD53	YPL153C	PDR15	Q04182	1529 aa	Known RBP	4.55	□□□□□ -1.68
RAD53	YPL153C	MBF1	O14467	151 aa	Known RBP	4.54	□□□□□ -1.68
RAD53	YPL153C	CPA1	P07258	411 aa	Known RBP	4.54	□□□□□ -1.68
RAD53	YPL153C	QRI5	P32344	111 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	UTR5	P32630	166 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	CLB6	P32943	380 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	SMD3	P43321	101 aa	Known RBP	4.54	□□□□□ -1.68
RAD53	YPL153C	UTP15	Q04305	513 aa	Known RBP	4.54	□□□□□ -1.68
RAD53	YPL153C	YMR317W	Q04893	1140 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	PRM3	Q08931	133 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	ACM1	Q08981	209 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	FCY1	Q12178	158 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	YGK3	Q12222	375 aa	Predicted RBP	4.54	□□□□□ -1.68
RAD53	YPL153C	YPS3	Q12303	508 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	DIF1	O13577	133 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	OPI3	P05375	206 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	TOM40	P23644	387 aa	Known RBP	4.54	□□□□□ -1.68
RAD53	YPL153C	NUD1	P32336	851 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	YSC84	P32793	468 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	YPL073C	P40323	161 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	MOB2	P43563	287 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	RRT5	P43607	289 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	MSY1	P48527	492 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	TOS8	P53147	276 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	SMM1	P53720	384 aa	Known RBP	4.54	□□□□□ -1.68
RAD53	YPL153C	DUG3	P53871	357 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	YDR029W	Q12111	104 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	RNH203	Q12338	110 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	IZH2	Q12442	317 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	KTI11	Q3E840	82 aa		4.54	□□□□□ -1.68
RAD53	YPL153C	CKS1	P20486	150 aa	Known RBP	4.53	□□□□□ -1.68
RAD53	YPL153C	KAR4	P25583	335 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	HNT2	P49775	206 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	NMA2	P53204	395 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	SLG1	P54867	378 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	YMR103C	Q04436	120 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	UPS1	Q05776	175 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	LOA1	Q06508	300 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	BOL1	Q3E793	110 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	VMR1	P38735	1592 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	ATS1	P31386	333 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	VFA1	P40080	203 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	CAT5	P41735	233 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	PET191	Q02772	108 aa		4.53	□□□□□ -1.68
RAD53	YPL153C	YPR174C	Q06616	221 aa	Predicted RBP	4.53	□□□□□ -1.68
RAD53	YPL153C	NUP188	P52593	1655 aa	Known RBP	4.53	□□□□□ -1.69
RAD53	YPL153C	COX1	P00401	534 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	COX5A	P00424	153 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	RIP1	P08067	215 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	ERG24	P32462	438 aa	Known RBP	4.52	□□□□□ -1.69
RAD53	YPL153C	RPB11	P38902	120 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	SWM2	P40342	146 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	FLX1	P40464	311 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	CWP2	P43497	92 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	YFR045W	P43617	309 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	ARP3	P47117	449 aa	Known RBP	4.52	□□□□□ -1.69
RAD53	YPL153C	YMR082C	Q04276	118 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	IES4	Q08561	116 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	RPL7A	P05737	244 aa	Known RBP	4.52	□□□□□ -1.69
RAD53	YPL153C	MDM10	P18409	493 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	VMA11	P32842	164 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	ZRT3	P34240	503 aa		4.52	□□□□□ -1.69
RAD53	YPL153C	NNK1	P36003	928 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms