RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C NVJ1P38881 321 aa2.71□□□□□ -1.98
RPA43YOR340C YER121WP40076 114 aa2.71□□□□□ -1.98
RPA43YOR340C YJL218WP40892 196 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C GDS1P41913 522 aa2.71□□□□□ -1.98
RPA43YOR340C YJL016WP47072 561 aa2.71□□□□□ -1.98
RPA43YOR340C YGL204CP53089 101 aa2.71□□□□□ -1.98
RPA43YOR340C VHT1P53241 593 aa2.71□□□□□ -1.98
RPA43YOR340C AAH1P53909 347 aa2.71□□□□□ -1.98
RPA43YOR340C YLR152CP54072 576 aa2.71□□□□□ -1.98
RPA43YOR340C BER1Q06688 274 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C TIR4Q12218 487 aaPredicted RBP2.71□□□□□ -1.98
RPA43YOR340C UTP23Q12339 254 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C RPL21BQ12672 160 aaKnown RBP2.71□□□□□ -1.98
RPA43YOR340C YCL048W-AQ2V2Q2 79 aa2.71□□□□□ -1.98
RPA43YOR340C YLR099W-AQ3E798 87 aa2.71□□□□□ -1.98
RPA43YOR340C TDH1P00360 332 aaKnown RBP2.7□□□□□ -1.98
RPA43YOR340C COX9P07255 59 aa2.7□□□□□ -1.98
RPA43YOR340C RPL30P14120 105 aaKnown RBP2.7□□□□□ -1.98
RPA43YOR340C RPL16BP26785 198 aaKnown RBP2.7□□□□□ -1.98
RPA43YOR340C VMA6P32366 345 aaKnown RBP2.7□□□□□ -1.98
RPA43YOR340C DOA4P32571 926 aa2.7□□□□□ -1.98
RPA43YOR340C PAU2P32612 120 aa2.7□□□□□ -1.98
RPA43YOR340C VMA11P32842 164 aa2.7□□□□□ -1.98
RPA43YOR340C YUH1P35127 236 aa2.7□□□□□ -1.98
RPA43YOR340C YPC1P38298 316 aa2.7□□□□□ -1.98
RPA43YOR340C SSH1P38353 490 aaKnown RBP2.7□□□□□ -1.98
RPA43YOR340C RMD6P39975 231 aa2.7□□□□□ -1.98
RPA43YOR340C DLS1P40366 167 aa2.7□□□□□ -1.98
RPA43YOR340C ERJ5P43613 295 aaPredicted RBP2.7□□□□□ -1.98
RPA43YOR340C GON7P46984 123 aa2.7□□□□□ -1.98
RPA43YOR340C YAE1P47118 141 aaPredicted RBP2.7□□□□□ -1.98
RPA43YOR340C SBH2P52871 88 aa2.7□□□□□ -1.98
RPA43YOR340C DOC1P53068 250 aa2.7□□□□□ -1.98
RPA43YOR340C NSA1P53136 463 aaPredicted RBP2.7□□□□□ -1.98
RPA43YOR340C YNL046WP53956 172 aa2.7□□□□□ -1.98
RPA43YOR340C TIM11P81449 96 aaPredicted RBP2.7□□□□□ -1.98
RPA43YOR340C YDC1Q02896 317 aa2.7□□□□□ -1.98
RPA43YOR340C DIG2Q03373 323 aaKnown RBP2.7□□□□□ -1.98
RPA43YOR340C GEP5Q12393 293 aa2.7□□□□□ -1.98
RPA43YOR340C MPD1Q12404 318 aaKnown RBP2.7□□□□□ -1.98
RPA43YOR340C PRM4Q12498 284 aa2.7□□□□□ -1.98
RPA43YOR340C HUT1Q12520 339 aa2.7□□□□□ -1.98
RPA43YOR340C DYN1P36022 4092 aa2.69□□□□□ -1.98
RPA43YOR340C REP2P03872 296 aa2.69□□□□□ -1.98
RPA43YOR340C RPL31AP0C2H8 113 aaKnown RBP2.69□□□□□ -1.98
RPA43YOR340C YGL041W-AP0C5N3 154 aa2.69□□□□□ -1.98
RPA43YOR340C BGL2P15703 313 aaKnown RBP2.69□□□□□ -1.98
RPA43YOR340C INO2P26798 304 aa2.69□□□□□ -1.98
RPA43YOR340C ARO4P32449 370 aaKnown RBP2.69□□□□□ -1.98
RPA43YOR340C GPI18P38211 433 aa2.69□□□□□ -1.98
RPA43YOR340C PET8P38921 284 aa2.69□□□□□ -1.98
RPA43YOR340C RIO2P40160 425 aaKnown RBP2.69□□□□□ -1.98
RPA43YOR340C YIA6P40556 373 aa2.69□□□□□ -1.98
RPA43YOR340C FMP48P53233 369 aa2.69□□□□□ -1.98
RPA43YOR340C MRX11Q03079 207 aa2.69□□□□□ -1.98
RPA43YOR340C GPI17Q04080 534 aa2.69□□□□□ -1.98
RPA43YOR340C UTP15Q04305 513 aaKnown RBP2.69□□□□□ -1.98
RPA43YOR340C YPR098CQ06089 161 aa2.69□□□□□ -1.98
RPA43YOR340C NEJ1Q06148 342 aa2.69□□□□□ -1.98
RPA43YOR340C RFU1Q08003 200 aa2.69□□□□□ -1.98
RPA43YOR340C CSI2Q08054 341 aa2.69□□□□□ -1.98
RPA43YOR340C POM33Q12164 279 aa2.69□□□□□ -1.98
RPA43YOR340C YMR105W-AQ8TGS8 64 aa2.69□□□□□ -1.98
RPA43YOR340C CDC28P00546 298 aaKnown RBP2.68□□□□□ -1.98
RPA43YOR340C HIS3P06633 220 aa2.68□□□□□ -1.98
RPA43YOR340C MATALPHA1P0CY06 175 aa2.68□□□□□ -1.98
RPA43YOR340C HMLALPHA1P0CY07 175 aa2.68□□□□□ -1.98
RPA43YOR340C MRPL20P22354 195 aaPredicted RBP2.68□□□□□ -1.98
RPA43YOR340C RPL24BP24000 155 aaKnown RBP2.68□□□□□ -1.98
RPA43YOR340C SNC2P33328 115 aa2.68□□□□□ -1.98
RPA43YOR340C SFK1P35735 353 aa2.68□□□□□ -1.98
RPA43YOR340C RCN1P36054 211 aa2.68□□□□□ -1.98
RPA43YOR340C PET100P38958 111 aa2.68□□□□□ -1.98
RPA43YOR340C MRX5P47007 382 aa2.68□□□□□ -1.98
RPA43YOR340C NRK1P53915 240 aa2.68□□□□□ -1.98
RPA43YOR340C YKR005CQ02203 525 aa2.68□□□□□ -1.98
RPA43YOR340C MRPS16Q02608 121 aa2.68□□□□□ -1.98
RPA43YOR340C YDR248CQ03786 193 aa2.68□□□□□ -1.98
RPA43YOR340C GMC1Q04399 608 aa2.68□□□□□ -1.98
RPA43YOR340C ATG41Q12048 136 aa2.68□□□□□ -1.98
RPA43YOR340C USB1Q12208 290 aaKnown RBP2.68□□□□□ -1.98
RPA43YOR340C IES3Q12345 250 aa2.68□□□□□ -1.98
RPA43YOR340C APA2P22108 325 aa2.67□□□□□ -1.98
RPA43YOR340C AHC2P25649 128 aa2.67□□□□□ -1.98
RPA43YOR340C IMP1P28627 190 aa2.67□□□□□ -1.98
RPA43YOR340C PEX4P29340 183 aa2.67□□□□□ -1.98
RPA43YOR340C YKL063CP35725 167 aa2.67□□□□□ -1.98
RPA43YOR340C MRPL27P36526 146 aaPredicted RBP2.67□□□□□ -1.98
RPA43YOR340C FIG1P38224 298 aa2.67□□□□□ -1.98
RPA43YOR340C UMP1P38293 148 aa2.67□□□□□ -1.98
RPA43YOR340C BFR1P38934 470 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
RPA43YOR340C DDI1P40087 428 aa2.67□□□□□ -1.98
RPA43YOR340C HIT1P46973 164 aa2.67□□□□□ -1.98
RPA43YOR340C UFD1P53044 361 aa2.67□□□□□ -1.98
RPA43YOR340C YPS5P53057 165 aa2.67□□□□□ -1.98
RPA43YOR340C GEP7P53171 287 aa2.67□□□□□ -1.98
RPA43YOR340C TMA20P89886 181 aaPredicted RBP2.67□□□□□ -1.98
RPA43YOR340C HAL1Q01766 294 aa2.67□□□□□ -1.98
RPA43YOR340C ATC1Q04005 294 aa2.67□□□□□ -1.98
RPA43YOR340C YLR283WQ05867 314 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms