RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C SHE2P36068 246 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
WHI3YNL197C PAN3P36102 679 aaPredicted RBP2.09□□□□□ -2.08
WHI3YNL197C VPS51P36116 164 aa2.09□□□□□ -2.08
WHI3YNL197C NRG2P38082 220 aa2.09□□□□□ -2.08
WHI3YNL197C VTC1P40046 129 aaRIP-Chip data2.09□□□□□ -2.08not detected
WHI3YNL197C SHH4Q06236 168 aa2.09□□□□□ -2.08
WHI3YNL197C YHR086W-AQ3E746 53 aa2.09□□□□□ -2.08
WHI3YNL197C YAR023CD6VPM8 179 aa2.08□□□□□ -2.08
WHI3YNL197C YFR054CP43622 192 aa2.08□□□□□ -2.08
WHI3YNL197C GPI17Q04080 534 aa2.08□□□□□ -2.08
WHI3YNL197C YOL014WQ08110 124 aa2.08□□□□□ -2.08
WHI3YNL197C MPD1Q12404 318 aaKnown RBP2.08□□□□□ -2.08
WHI3YNL197C YKL102CP34249 101 aa2.07□□□□□ -2.08
WHI3YNL197C YNL217WP40152 326 aa2.07□□□□□ -2.08
WHI3YNL197C YFL019CP43576 117 aa2.07□□□□□ -2.08
WHI3YNL197C NUP49Q02199 472 aa2.07□□□□□ -2.08
WHI3YNL197C DYN3Q04949 312 aa2.07□□□□□ -2.08
WHI3YNL197C YML100W-AQ8TGT0 57 aa2.07□□□□□ -2.08
WHI3YNL197C POR1P04840 283 aaKnown RBP2.07□□□□□ -2.08
WHI3YNL197C FES1P38260 290 aa2.07□□□□□ -2.08
WHI3YNL197C YER134CP40081 178 aa2.07□□□□□ -2.08
WHI3YNL197C AGE2P40529 298 aa2.07□□□□□ -2.08
WHI3YNL197C YLR050CQ12155 161 aaKnown RBP2.07□□□□□ -2.08
WHI3YNL197C ATG40Q99325 256 aa2.07□□□□□ -2.08
WHI3YNL197C SOL1P50278 321 aa2.06□□□□□ -2.08
WHI3YNL197C SPO13P23624 291 aa2.05□□□□□ -2.08
WHI3YNL197C VMA22P38784 181 aa2.05□□□□□ -2.08
WHI3YNL197C GAA1P39012 614 aa2.05□□□□□ -2.08
WHI3YNL197C ERG25P53045 309 aa2.05□□□□□ -2.08
WHI3YNL197C HPT1Q04178 221 aaKnown RBP2.05□□□□□ -2.08
WHI3YNL197C FZF1P32805 299 aa2.05□□□□□ -2.08
WHI3YNL197C TVP38P36164 337 aa2.05□□□□□ -2.08
WHI3YNL197C DSE2P38844 325 aa2.05□□□□□ -2.08
WHI3YNL197C AIM2P39721 246 aa2.05□□□□□ -2.08
WHI3YNL197C GPI14P47088 403 aaKnown RBP2.05□□□□□ -2.08
WHI3YNL197C HSK3P69852 69 aa2.05□□□□□ -2.08
WHI3YNL197C YLR236CA0A023PZG4 107 aa2.04□□□□□ -2.08
WHI3YNL197C AME1P38313 324 aa2.04□□□□□ -2.08
WHI3YNL197C MTW1P39731 289 aa2.04□□□□□ -2.08
WHI3YNL197C AYR1P40471 297 aa2.04□□□□□ -2.08
WHI3YNL197C POP3P53833 195 aaPredicted RBP2.04□□□□□ -2.08
WHI3YNL197C YMR099CQ03161 297 aaKnown RBP2.04□□□□□ -2.08
WHI3YNL197C SML1Q04964 104 aa2.04□□□□□ -2.08
WHI3YNL197C DGK1Q12382 290 aa2.04□□□□□ -2.08
WHI3YNL197C PHO85P17157 305 aa2.03□□□□□ -2.08
WHI3YNL197C PEX11Q12462 236 aa2.03□□□□□ -2.08
WHI3YNL197C TIR1P10863 254 aa2.03□□□□□ -2.08
WHI3YNL197C SEC14P24280 304 aaKnown RBP2.03□□□□□ -2.08
WHI3YNL197C UBC6P33296 250 aaPredicted RBP2.03□□□□□ -2.08
WHI3YNL197C NSG1P38837 291 aa2.03□□□□□ -2.08
WHI3YNL197C YPR014CQ6B0W2 109 aa2.03□□□□□ -2.08
WHI3YNL197C FAS1P07149 2051 aaKnown RBP2.02□□□□□ -2.09
WHI3YNL197C YNL200CP40165 246 aaKnown RBP2.02□□□□□ -2.09
WHI3YNL197C RFC2P40348 353 aa2.02□□□□□ -2.09
WHI3YNL197C YLR412C-AQ3E742 68 aa2.02□□□□□ -2.09
WHI3YNL197C AVT2P39981 480 aa2.01□□□□□ -2.09
WHI3YNL197C ERJ5P43613 295 aaPredicted RBP2.01□□□□□ -2.09
WHI3YNL197C TMA22P47089 198 aaPredicted RBP2.01□□□□□ -2.09
WHI3YNL197C KNH1P50112 268 aa2.01□□□□□ -2.09
WHI3YNL197C YOR342CQ12182 319 aa2.01□□□□□ -2.09
WHI3YNL197C YDL180WQ12301 547 aa2.01□□□□□ -2.09
WHI3YNL197C BOL1Q3E793 110 aa2.01□□□□□ -2.09
WHI3YNL197C CPR5P35176 225 aa2.01□□□□□ -2.09
WHI3YNL197C YKR045CP36138 183 aa2.01□□□□□ -2.09
WHI3YNL197C YBR209WP38311 105 aa2.01□□□□□ -2.09
WHI3YNL197C TTI2P47168 421 aa2.01□□□□□ -2.09
WHI3YNL197C RDI1Q12434 202 aa2.01□□□□□ -2.09
WHI3YNL197C MDH2P22133 377 aa2□□□□□ -2.09
WHI3YNL197C FYV4P38783 130 aaPredicted RBP2□□□□□ -2.09
WHI3YNL197C PEP8P40335 379 aa2□□□□□ -2.09
WHI3YNL197C VPS71Q03433 280 aa2□□□□□ -2.09
WHI3YNL197C FYV12Q08559 129 aa2□□□□□ -2.09
WHI3YNL197C QCR2P07257 368 aa1.99□□□□□ -2.09
WHI3YNL197C SEC11P15367 167 aa1.99□□□□□ -2.09
WHI3YNL197C IDP1P21954 428 aaKnown RBP1.99□□□□□ -2.09
WHI3YNL197C CSH1P38287 376 aa1.99□□□□□ -2.09
WHI3YNL197C RNH202Q05635 350 aa1.99□□□□□ -2.09
WHI3YNL197C IRC23Q08416 157 aa1.99□□□□□ -2.09
WHI3YNL197C EFM5P53200 248 aaKnown RBP1.99□□□□□ -2.09
WHI3YNL197C ANT1Q06497 328 aa1.99□□□□□ -2.09
WHI3YNL197C DAS2Q12084 232 aa1.99□□□□□ -2.09
WHI3YNL197C ATP20Q12233 115 aa1.99□□□□□ -2.09
WHI3YNL197C CMD1P06787 147 aaKnown RBP1.98□□□□□ -2.09
WHI3YNL197C PAM17P36147 197 aa1.98□□□□□ -2.09
WHI3YNL197C SPC25P40014 221 aa1.98□□□□□ -2.09
WHI3YNL197C BUD25P85052 153 aa1.98□□□□□ -2.09
WHI3YNL197C DIG2Q03373 323 aaKnown RBP1.98□□□□□ -2.09
WHI3YNL197C YMR295CQ03559 197 aa1.98□□□□□ -2.09
WHI3YNL197C CUE4Q04201 117 aaPredicted RBP1.98□□□□□ -2.09
WHI3YNL197C SHH3Q04487 196 aa1.98□□□□□ -2.09
WHI3YNL197C RAD28Q12021 506 aa1.98□□□□□ -2.09
WHI3YNL197C TFC1P32367 649 aa1.98□□□□□ -2.09
WHI3YNL197C EDC3P39998 551 aaKnown RBP1.98□□□□□ -2.09
WHI3YNL197C YMR253CQ04835 414 aa1.98□□□□□ -2.09
WHI3YNL197C YLR053CQ12026 108 aa1.98□□□□□ -2.09
WHI3YNL197C YCR023CP25351 611 aa1.97□□□□□ -2.09
WHI3YNL197C YGL235WP53071 178 aa1.97□□□□□ -2.09
WHI3YNL197C YNL033WP53964 284 aa1.97□□□□□ -2.09
WHI3YNL197C PLP1Q04004 230 aa1.97□□□□□ -2.09
WHI3YNL197C NSL1Q12143 216 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms