RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C HOC1P47124 396 aa0.62□□□□□ -2.31
RKR1YMR247C DAD4P69851 72 aa0.62□□□□□ -2.31
RKR1YMR247C YHR007C-AQ07074 71 aa0.62□□□□□ -2.31
RKR1YMR247C MED11Q99278 115 aa0.62□□□□□ -2.31
RKR1YMR247C FAB1P34756 2278 aa0.61□□□□□ -2.31
RKR1YMR247C SIR2P06700 562 aa0.61□□□□□ -2.31
RKR1YMR247C SNF4P12904 322 aa0.61□□□□□ -2.31
RKR1YMR247C RPS5P26783 225 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C UBC8P28263 218 aa0.61□□□□□ -2.31
RKR1YMR247C ERG24P32462 438 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C RIB1P38066 345 aa0.61□□□□□ -2.31
RKR1YMR247C CTR2P38865 189 aa0.61□□□□□ -2.31
RKR1YMR247C OSW5P40219 148 aa0.61□□□□□ -2.31
RKR1YMR247C OTU1P43558 301 aa0.61□□□□□ -2.31
RKR1YMR247C SKI6P46948 246 aaPredicted RBP0.61□□□□□ -2.31
RKR1YMR247C TDA4P47153 279 aa0.61□□□□□ -2.31
RKR1YMR247C GPI17Q04080 534 aa0.61□□□□□ -2.31
RKR1YMR247C HPT1Q04178 221 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C ATG38Q05789 226 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C COQ10Q08058 207 aa0.61□□□□□ -2.31
RKR1YMR247C YPL119C-AQ3E751 87 aa0.61□□□□□ -2.31
RKR1YMR247C CDC8P00572 216 aa0.61□□□□□ -2.31
RKR1YMR247C MGT1P26188 188 aa0.61□□□□□ -2.31
RKR1YMR247C RPC19P28000 142 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C YBL081WP38180 368 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C ECM33P38248 429 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C YBR220CP38318 560 aa0.61□□□□□ -2.31
RKR1YMR247C GOS1P38736 223 aa0.61□□□□□ -2.31
RKR1YMR247C GVP36P40531 326 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C YGL034CP53186 121 aa0.61□□□□□ -2.31
RKR1YMR247C YNL046WP53956 172 aa0.61□□□□□ -2.31
RKR1YMR247C MRPS8Q03799 155 aa0.61□□□□□ -2.31
RKR1YMR247C KRE5P22023 1365 aa0.61□□□□□ -2.31
RKR1YMR247C YHR139C-AO13536 103 aa0.61□□□□□ -2.31
RKR1YMR247C PHO85P17157 305 aa0.61□□□□□ -2.31
RKR1YMR247C SEC22P22214 214 aa0.61□□□□□ -2.31
RKR1YMR247C BET1P22804 142 aa0.61□□□□□ -2.31
RKR1YMR247C VMA11P32842 164 aa0.61□□□□□ -2.31
RKR1YMR247C PTM1P32857 523 aa0.61□□□□□ -2.31
RKR1YMR247C SFK1P35735 353 aa0.61□□□□□ -2.31
RKR1YMR247C COA1P40452 197 aa0.61□□□□□ -2.31
RKR1YMR247C YIL012WP40551 113 aa0.61□□□□□ -2.31
RKR1YMR247C APS3P47064 194 aa0.61□□□□□ -2.31
RKR1YMR247C CCC1P47818 322 aa0.61□□□□□ -2.31
RKR1YMR247C YGL185CP53100 379 aa0.61□□□□□ -2.31
RKR1YMR247C RSM10Q03201 203 aa0.61□□□□□ -2.31
RKR1YMR247C BNA7Q04066 261 aa0.61□□□□□ -2.31
RKR1YMR247C DGK1Q12382 290 aa0.61□□□□□ -2.31
RKR1YMR247C RPS14AP06367 137 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C PET8P38921 284 aa0.61□□□□□ -2.31
RKR1YMR247C RPS14BP39516 138 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C HPA3P39979 161 aa0.61□□□□□ -2.31
RKR1YMR247C HMF1P40037 129 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C YER085CP40058 173 aa0.61□□□□□ -2.31
RKR1YMR247C BNA6P43619 295 aa0.61□□□□□ -2.31
RKR1YMR247C GLG2P47011 380 aa0.61□□□□□ -2.31
RKR1YMR247C YJR149WP47177 404 aa0.61□□□□□ -2.31
RKR1YMR247C YGL159WP53110 370 aa0.61□□□□□ -2.31
RKR1YMR247C HOP2P53187 214 aa0.61□□□□□ -2.31
RKR1YMR247C FMP41P53889 259 aaKnown RBP0.61□□□□□ -2.31
RKR1YMR247C YPL039WQ03080 316 aa0.61□□□□□ -2.31
RKR1YMR247C ATG31Q12421 196 aa0.61□□□□□ -2.31
RKR1YMR247C YPR014CQ6B0W2 109 aa0.61□□□□□ -2.31
RKR1YMR247C REP2P03872 296 aa0.6□□□□□ -2.31
RKR1YMR247C SEC4P07560 215 aaKnown RBP0.6□□□□□ -2.31
RKR1YMR247C NHP6BP11633 99 aaKnown RBP0.6□□□□□ -2.31
RKR1YMR247C URA6P15700 204 aa0.6□□□□□ -2.31
RKR1YMR247C PET9P18239 318 aaKnown RBP0.6□□□□□ -2.31
RKR1YMR247C TRX3P25372 127 aa0.6□□□□□ -2.31
RKR1YMR247C TCA17P32613 152 aa0.6□□□□□ -2.31
RKR1YMR247C FZF1P32805 299 aa0.6□□□□□ -2.31
RKR1YMR247C UBC6P33296 250 aaPredicted RBP0.6□□□□□ -2.31
RKR1YMR247C SHG1P38337 142 aa0.6□□□□□ -2.31
RKR1YMR247C RTC3P38804 111 aaPredicted RBP0.6□□□□□ -2.31
RKR1YMR247C RIO2P40160 425 aaKnown RBP0.6□□□□□ -2.31
RKR1YMR247C PNC1P53184 216 aaKnown RBP0.6□□□□□ -2.31
RKR1YMR247C GET1P53192 235 aa0.6□□□□□ -2.31
RKR1YMR247C MSH5Q12175 901 aa0.6□□□□□ -2.31
RKR1YMR247C YOR029WQ12243 111 aa0.6□□□□□ -2.31
RKR1YMR247C KTI11Q3E840 82 aa0.6□□□□□ -2.31
RKR1YMR247C PRP18P33411 251 aaPredicted RBP0.6□□□□□ -2.31
RKR1YMR247C SIP3P38717 1229 aa0.6□□□□□ -2.31
RKR1YMR247C SER33P40510 469 aa0.6□□□□□ -2.31
RKR1YMR247C RPA43P46669 326 aa0.6□□□□□ -2.31
RKR1YMR247C NUP57P48837 541 aa0.6□□□□□ -2.31
RKR1YMR247C PDR17P53844 350 aa0.6□□□□□ -2.31
RKR1YMR247C LSM7P53905 115 aaKnown RBP0.6□□□□□ -2.31
RKR1YMR247C NRK1P53915 240 aa0.6□□□□□ -2.31
RKR1YMR247C PET117Q02771 107 aa0.6□□□□□ -2.31
RKR1YMR247C COX20Q04935 205 aa0.6□□□□□ -2.31
RKR1YMR247C YMR030W-AQ3E760 96 aa0.6□□□□□ -2.31
RKR1YMR247C VAR1P02381 398 aa0.6□□□□□ -2.31
RKR1YMR247C RPL28P02406 149 aaKnown RBP0.6□□□□□ -2.31
RKR1YMR247C STE18P18852 110 aa0.6□□□□□ -2.31
RKR1YMR247C QRI5P32344 111 aa0.6□□□□□ -2.31
RKR1YMR247C ASF2P32448 525 aaPredicted RBP0.6□□□□□ -2.31
RKR1YMR247C CBT1P36038 271 aaPredicted RBP0.6□□□□□ -2.31
RKR1YMR247C SRP102P36057 244 aaPredicted RBP0.6□□□□□ -2.31
RKR1YMR247C RMD6P39975 231 aa0.6□□□□□ -2.31
RKR1YMR247C ERJ5P43613 295 aaPredicted RBP0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 118 ms