RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeast

Gene BER1, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BER1	YLR412W	GGA1	Q06336	557 aa		0.54	□□□□□ -2.32
BER1	YLR412W	YPR013C	Q12145	317 aa		0.54	□□□□□ -2.32
BER1	YLR412W	NCB2	Q92317	146 aa		0.54	□□□□□ -2.32
BER1	YLR412W	UBC12	P52491	188 aa		0.53	□□□□□ -2.32
BER1	YLR412W	AIM2	P39721	246 aa		0.52	□□□□□ -2.33
BER1	YLR412W	SER2	P42941	309 aa		0.52	□□□□□ -2.33
BER1	YLR412W	THG1	P53215	237 aa	Known RBP	0.52	□□□□□ -2.33
BER1	YLR412W	YMR295C	Q03559	197 aa		0.52	□□□□□ -2.33
BER1	YLR412W	YAR023C	D6VPM8	179 aa		0.51	□□□□□ -2.33
BER1	YLR412W	PHO85	P17157	305 aa		0.51	□□□□□ -2.33
BER1	YLR412W	CNB1	P25296	175 aa		0.51	□□□□□ -2.33
BER1	YLR412W	TAF14	P35189	244 aa		0.51	□□□□□ -2.33
BER1	YLR412W	MRPL15	P36523	253 aa		0.51	□□□□□ -2.33
BER1	YLR412W	IKI1	P38874	309 aa		0.51	□□□□□ -2.33
BER1	YLR412W	MSS2	P40990	351 aa		0.51	□□□□□ -2.33
BER1	YLR412W	MET31	Q03081	177 aa		0.51	□□□□□ -2.33
BER1	YLR412W	YDR391C	Q04170	232 aa		0.51	□□□□□ -2.33
BER1	YLR412W	DYN3	Q04949	312 aa		0.51	□□□□□ -2.33
BER1	YLR412W	YPK2	P18961	677 aa		0.5	□□□□□ -2.33
BER1	YLR412W	ARO7	P32178	256 aa		0.5	□□□□□ -2.33
BER1	YLR412W	UGX2	P32772	223 aa		0.5	□□□□□ -2.33
BER1	YLR412W	PAM17	P36147	197 aa		0.5	□□□□□ -2.33
BER1	YLR412W	YER134C	P40081	178 aa		0.5	□□□□□ -2.33
BER1	YLR412W	BNA7	Q04066	261 aa		0.5	□□□□□ -2.33
BER1	YLR412W	SHH3	Q04487	196 aa		0.5	□□□□□ -2.33
BER1	YLR412W	FUS2	Q05670	677 aa		0.5	□□□□□ -2.33
BER1	YLR412W	YOL014W	Q08110	124 aa		0.5	□□□□□ -2.33
BER1	YLR412W	MBF1	O14467	151 aa	Known RBP	0.49	□□□□□ -2.33
BER1	YLR412W	SKI6	P46948	246 aa	Predicted RBP	0.49	□□□□□ -2.33
BER1	YLR412W	ALB1	P47019	175 aa	Predicted RBP	0.49	□□□□□ -2.33
BER1	YLR412W	YMR226C	Q05016	267 aa	Known RBP	0.49	□□□□□ -2.33
BER1	YLR412W	YPR203W	Q08994	102 aa		0.49	□□□□□ -2.33
BER1	YLR412W	ARG80	P07249	177 aa		0.48	□□□□□ -2.33
BER1	YLR412W	RFA3	P26755	122 aa	Known RBP	0.48	□□□□□ -2.33
BER1	YLR412W	SFK1	P35735	353 aa		0.48	□□□□□ -2.33
BER1	YLR412W	ARP3	P47117	449 aa	Known RBP	0.48	□□□□□ -2.33
BER1	YLR412W	YNL033W	P53964	284 aa		0.48	□□□□□ -2.33
BER1	YLR412W	TIR1	P10863	254 aa		0.47	□□□□□ -2.33
BER1	YLR412W	SEN2	P16658	377 aa		0.47	□□□□□ -2.33
BER1	YLR412W	MGT1	P26188	188 aa		0.47	□□□□□ -2.33
BER1	YLR412W	AHT1	P29589	182 aa		0.47	□□□□□ -2.33
BER1	YLR412W	GSP2	P32836	220 aa	Known RBP	0.47	□□□□□ -2.33
BER1	YLR412W	YHL037C	P38733	133 aa		0.47	□□□□□ -2.33
BER1	YLR412W	MTW1	P39731	289 aa		0.47	□□□□□ -2.33
BER1	YLR412W	YML100W-A	Q8TGT0	57 aa		0.47	□□□□□ -2.33
BER1	YLR412W	UBC8	P28263	218 aa		0.46	□□□□□ -2.34
BER1	YLR412W	YBR242W	P38331	238 aa		0.46	□□□□□ -2.34
BER1	YLR412W	RFC4	P40339	323 aa	Known RBP	0.46	□□□□□ -2.34
BER1	YLR412W	CUP9	P41817	306 aa		0.46	□□□□□ -2.34
BER1	YLR412W	YFL051C	P43552	160 aa		0.46	□□□□□ -2.34
BER1	YLR412W	YJR111C	P47148	283 aa	Known RBP	0.46	□□□□□ -2.34
BER1	YLR412W	YMR253C	Q04835	414 aa		0.46	□□□□□ -2.34
BER1	YLR412W	MRS1	P07266	363 aa		0.45	□□□□□ -2.34
BER1	YLR412W	ASF2	P32448	525 aa	Predicted RBP	0.45	□□□□□ -2.34
BER1	YLR412W	NAT3	Q06504	195 aa		0.45	□□□□□ -2.34
BER1	YLR412W	GIS3	Q12418	502 aa		0.45	□□□□□ -2.34
BER1	YLR412W	TAR1	Q8TGM6	124 aa		0.45	□□□□□ -2.34
BER1	YLR412W	PRP8	P33334	2413 aa	Known RBP	0.45	□□□□□ -2.34
BER1	YLR412W	HTB1	P02293	131 aa	Known RBP	0.44	□□□□□ -2.34
BER1	YLR412W	HTB2	P02294	131 aa		0.44	□□□□□ -2.34
BER1	YLR412W	GCN20	P43535	752 aa	Known RBP	0.44	□□□□□ -2.34
BER1	YLR412W	NOP19	P53317	196 aa	Predicted RBP	0.44	□□□□□ -2.34
BER1	YLR412W	FMP49	A0A023PZB3	126 aa		0.43	□□□□□ -2.34
BER1	YLR412W	SNF4	P12904	322 aa		0.43	□□□□□ -2.34
BER1	YLR412W	SPC25	P40014	221 aa		0.43	□□□□□ -2.34
BER1	YLR412W	VPS71	Q03433	280 aa		0.43	□□□□□ -2.34
BER1	YLR412W	YLR036C	Q07986	203 aa		0.43	□□□□□ -2.34
BER1	YLR412W	PST2	Q12335	198 aa	Known RBP	0.43	□□□□□ -2.34
BER1	YLR412W	ADF1	Q2V2Q1	113 aa		0.43	□□□□□ -2.34
BER1	YLR412W	IDP1	P21954	428 aa	Known RBP	0.42	□□□□□ -2.34
BER1	YLR412W	YCR023C	P25351	611 aa		0.42	□□□□□ -2.34
BER1	YLR412W	MAK5	P38112	773 aa	Predicted RBP	0.42	□□□□□ -2.34
BER1	YLR412W	PGA2	P53903	129 aa		0.42	□□□□□ -2.34
BER1	YLR412W	RRP17	Q04031	235 aa	Predicted RBP	0.42	□□□□□ -2.34
BER1	YLR412W	FIT1	Q04433	528 aa		0.42	□□□□□ -2.34
BER1	YLR412W	YLR031W	Q07978	186 aa		0.42	□□□□□ -2.34
BER1	YLR412W	GET4	Q12125	312 aa		0.42	□□□□□ -2.34
BER1	YLR412W	STF2	P16965	84 aa		0.41	□□□□□ -2.34
BER1	YLR412W	PDS1	P40316	373 aa	Predicted RBP	0.41	□□□□□ -2.34
BER1	YLR412W	YIL102C	P40488	101 aa		0.41	□□□□□ -2.34
BER1	YLR412W	TDA4	P47153	279 aa		0.41	□□□□□ -2.34
BER1	YLR412W	YGL235W	P53071	178 aa		0.41	□□□□□ -2.34
BER1	YLR412W	MMS2	P53152	137 aa		0.41	□□□□□ -2.34
BER1	YLR412W	FYV12	Q08559	129 aa		0.41	□□□□□ -2.34
BER1	YLR412W	CCW12	Q12127	133 aa		0.41	□□□□□ -2.34
BER1	YLR412W	YAR064W	P39563	99 aa		0.4	□□□□□ -2.35
BER1	YLR412W	YFL019C	P43576	117 aa		0.4	□□□□□ -2.35
BER1	YLR412W	GPI14	P47088	403 aa	Known RBP	0.4	□□□□□ -2.35
BER1	YLR412W	YMR315W	Q04869	349 aa	Known RBP	0.4	□□□□□ -2.35
BER1	YLR412W	ABP140	Q08641	628 aa	Known RBP	0.4	□□□□□ -2.35
BER1	YLR412W	RUD3	Q12234	484 aa	Known RBP	0.4	□□□□□ -2.35
BER1	YLR412W	YCL012C	Q8J0M4	134 aa		0.4	□□□□□ -2.35
BER1	YLR412W	CBF1	P17106	351 aa		0.39	□□□□□ -2.35
BER1	YLR412W	MPM1	P40364	252 aa		0.39	□□□□□ -2.35
BER1	YLR412W	YNL184C	P53876	108 aa		0.39	□□□□□ -2.35
BER1	YLR412W	IGO2	Q9P305	131 aa		0.39	□□□□□ -2.35
BER1	YLR412W	ETR1	P38071	380 aa		0.38	□□□□□ -2.35
BER1	YLR412W	SBH2	P52871	88 aa		0.38	□□□□□ -2.35
BER1	YLR412W	PIR1	Q03178	341 aa		0.38	□□□□□ -2.35
BER1	YLR412W	YBL010C	P32788	280 aa		0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms