RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C TRR2P38816 342 aa2.8□□□□□ -1.96
VPS33YLR396C SPC25P40014 221 aa2.8□□□□□ -1.96
VPS33YLR396C NSA2P40078 261 aaKnown RBP2.8□□□□□ -1.96
VPS33YLR396C DLS1P40366 167 aa2.8□□□□□ -1.96
VPS33YLR396C YIL029CP40538 142 aa2.8□□□□□ -1.96
VPS33YLR396C OTU1P43558 301 aa2.8□□□□□ -1.96
VPS33YLR396C CIN2P46670 268 aa2.8□□□□□ -1.96
VPS33YLR396C TRM9P49957 279 aa2.8□□□□□ -1.96
VPS33YLR396C NAT4Q04751 285 aa2.8□□□□□ -1.96
VPS33YLR396C YPR170W-BP0C5R9 85 aa2.79□□□□□ -1.96
VPS33YLR396C BGL2P15703 313 aaKnown RBP2.79□□□□□ -1.96
VPS33YLR396C SLM5P25345 492 aaKnown RBP2.79□□□□□ -1.96
VPS33YLR396C STP22P25604 385 aa2.79□□□□□ -1.96
VPS33YLR396C MRPS9P38120 278 aa2.79□□□□□ -1.96
VPS33YLR396C SDS24P38314 527 aa2.79□□□□□ -1.96
VPS33YLR396C TRS20P38334 175 aa2.79□□□□□ -1.96
VPS33YLR396C YEL073CP39974 107 aa2.79□□□□□ -1.96
VPS33YLR396C LYS12P40495 371 aaKnown RBP2.79□□□□□ -1.96
VPS33YLR396C YGL262WP53054 175 aa2.79□□□□□ -1.96
VPS33YLR396C NIF3P53081 288 aa2.79□□□□□ -1.96
VPS33YLR396C YGR015CP53208 328 aa2.79□□□□□ -1.96
VPS33YLR396C YGR017WP53210 297 aa2.79□□□□□ -1.96
VPS33YLR396C YGR117CP53270 476 aa2.79□□□□□ -1.96
VPS33YLR396C TRM44Q02648 567 aaKnown RBP2.79□□□□□ -1.96
VPS33YLR396C DIG2Q03373 323 aaKnown RBP2.79□□□□□ -1.96
VPS33YLR396C ATG39Q06159 398 aa2.79□□□□□ -1.96
VPS33YLR396C CSM4Q08955 156 aa2.79□□□□□ -1.96
VPS33YLR396C ALK2P32789 676 aaPredicted RBP2.78□□□□□ -1.96
VPS33YLR396C CSE2P33308 149 aa2.78□□□□□ -1.96
VPS33YLR396C UPS2P35200 230 aa2.78□□□□□ -1.96
VPS33YLR396C PRY2P36110 329 aa2.78□□□□□ -1.96
VPS33YLR396C YBR220CP38318 560 aa2.78□□□□□ -1.96
VPS33YLR396C CUE1P38428 203 aa2.78□□□□□ -1.96
VPS33YLR396C MNL1P38888 796 aa2.78□□□□□ -1.96
VPS33YLR396C IRC22P40006 225 aa2.78□□□□□ -1.96
VPS33YLR396C PRE5P40302 234 aaKnown RBP2.78□□□□□ -1.96
VPS33YLR396C PHS1P40857 217 aa2.78□□□□□ -1.96
VPS33YLR396C PAU5P43575 122 aa2.78□□□□□ -1.96
VPS33YLR396C LOC1P43586 204 aaPredicted RBP2.78□□□□□ -1.96
VPS33YLR396C YMR321CQ04898 105 aa2.78□□□□□ -1.96
VPS33YLR396C RTN1Q04947 295 aaKnown RBP2.78□□□□□ -1.96
VPS33YLR396C IRC25Q07951 179 aa2.78□□□□□ -1.96
VPS33YLR396C YOR015WQ12169 119 aa2.78□□□□□ -1.96
VPS33YLR396C TPO4Q12256 659 aa2.78□□□□□ -1.96
VPS33YLR396C AHC1Q12433 566 aa2.78□□□□□ -1.96
VPS33YLR396C YOR338WQ99326 363 aa2.78□□□□□ -1.96
VPS33YLR396C PET20Q99373 253 aa2.78□□□□□ -1.96
VPS33YLR396C Q0144Q9ZZW2 109 aa2.78□□□□□ -1.96
VPS33YLR396C COX9P07255 59 aa2.78□□□□□ -1.96
VPS33YLR396C YOL162WP0CF19 215 aa2.78□□□□□ -1.96
VPS33YLR396C LDB16P25587 256 aa2.78□□□□□ -1.96
VPS33YLR396C UTR5P32630 166 aa2.78□□□□□ -1.96
VPS33YLR396C TOA2P32774 122 aa2.78□□□□□ -1.96
VPS33YLR396C MGM101P32787 269 aaKnown RBP2.78□□□□□ -1.96
VPS33YLR396C MRPL27P36526 146 aaPredicted RBP2.78□□□□□ -1.96
VPS33YLR396C AVT7P40501 490 aa2.78□□□□□ -1.96
VPS33YLR396C BAT2P47176 376 aaKnown RBP2.78□□□□□ -1.96
VPS33YLR396C YIP5P53108 310 aa2.78□□□□□ -1.96
VPS33YLR396C YNL134CP53912 376 aaKnown RBP2.78□□□□□ -1.96
VPS33YLR396C YPR147CQ06522 304 aaKnown RBP2.78□□□□□ -1.96
VPS33YLR396C ATG10Q07879 167 aa2.78□□□□□ -1.96
VPS33YLR396C YPR011CQ12251 326 aa2.78□□□□□ -1.96
VPS33YLR396C IZH2Q12442 317 aa2.78□□□□□ -1.96
VPS33YLR396C RAX2Q12465 1220 aa2.78□□□□□ -1.96
VPS33YLR396C ODC2Q99297 307 aa2.78□□□□□ -1.96
VPS33YLR396C SAL1D6W196 494 aa2.77□□□□□ -1.97
VPS33YLR396C TDH3P00359 332 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
VPS33YLR396C MSW1P04803 379 aa2.77□□□□□ -1.97
VPS33YLR396C ARF1P11076 181 aaKnown RBP2.77□□□□□ -1.97
VPS33YLR396C SCH9P11792 824 aaKnown RBP2.77□□□□□ -1.97
VPS33YLR396C MRS4P23500 304 aa2.77□□□□□ -1.97
VPS33YLR396C PRP18P33411 251 aaPredicted RBP2.77□□□□□ -1.97
VPS33YLR396C WSS1P38838 269 aa2.77□□□□□ -1.97
VPS33YLR396C CDC40P40968 455 aaPredicted RBP2.77□□□□□ -1.97
VPS33YLR396C LCB3P47013 409 aa2.77□□□□□ -1.97
VPS33YLR396C FLC3P53121 802 aa2.77□□□□□ -1.97
VPS33YLR396C THG1P53215 237 aaKnown RBP2.77□□□□□ -1.97
VPS33YLR396C YNL260CP53846 198 aa2.77□□□□□ -1.97
VPS33YLR396C YNL143CP53908 130 aa2.77□□□□□ -1.97
VPS33YLR396C INP1Q03694 420 aa2.77□□□□□ -1.97
VPS33YLR396C YML096WQ04489 525 aa2.77□□□□□ -1.97
VPS33YLR396C MCH1Q07376 486 aa2.77□□□□□ -1.97
VPS33YLR396C PAU23Q07987 124 aa2.77□□□□□ -1.97
VPS33YLR396C HRD1Q08109 551 aa2.77□□□□□ -1.97
VPS33YLR396C PAU17Q12370 124 aa2.77□□□□□ -1.97
VPS33YLR396C SLO1Q3E784 85 aa2.77□□□□□ -1.97
VPS33YLR396C MSI1P13712 422 aa2.77□□□□□ -1.97
VPS33YLR396C DPM1P14020 267 aaKnown RBP2.77□□□□□ -1.97
VPS33YLR396C TRX3P25372 127 aa2.77□□□□□ -1.97
VPS33YLR396C CWP1P28319 239 aa2.77□□□□□ -1.97
VPS33YLR396C TRR1P29509 319 aaKnown RBP2.77□□□□□ -1.97
VPS33YLR396C FMT1P32785 401 aa2.77□□□□□ -1.97
VPS33YLR396C RPL14AP36105 138 aaKnown RBP2.77□□□□□ -1.97
VPS33YLR396C AME1P38313 324 aa2.77□□□□□ -1.97
VPS33YLR396C RPL14BP38754 138 aaKnown RBP2.77□□□□□ -1.97
VPS33YLR396C RPF1P38805 295 aaKnown RBP2.77□□□□□ -1.97
VPS33YLR396C PFS1P38872 237 aa2.77□□□□□ -1.97
VPS33YLR396C YEA6P39953 335 aa2.77□□□□□ -1.97
VPS33YLR396C SMB1P40018 196 aaKnown RBP2.77□□□□□ -1.97
VPS33YLR396C MIC26P50087 233 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms