RNA–Protein interactions for RNA: YKL017C

HCS1, Transcript of Hexameric DNA polymerase alpha-associated DNA helicase A, yeastyeast

Gene HCS1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCS1YKL017C ZRT3P34240 503 aa1.47□□□□□ -2.17
HCS1YKL017C SHE2P36068 246 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
HCS1YKL017C PAN3P36102 679 aaPredicted RBP1.47□□□□□ -2.17
HCS1YKL017C YBR242WP38331 238 aa1.47□□□□□ -2.17
HCS1YKL017C RPF1P38805 295 aaKnown RBP1.47□□□□□ -2.17
HCS1YKL017C AVT6P40074 448 aa1.47□□□□□ -2.17
HCS1YKL017C UFD1P53044 361 aa1.47□□□□□ -2.17
HCS1YKL017C YDR366CP87287 132 aa1.47□□□□□ -2.17
HCS1YKL017C RPL21AQ02753 160 aaKnown RBP1.47□□□□□ -2.17
HCS1YKL017C DIG2Q03373 323 aaKnown RBP1.47□□□□□ -2.17
HCS1YKL017C CNL1Q06333 122 aa1.47□□□□□ -2.17
HCS1YKL017C DGK1Q12382 290 aa1.47□□□□□ -2.17
HCS1YKL017C YPR014CQ6B0W2 109 aa1.47□□□□□ -2.17
HCS1YKL017C PEP1P32319 1579 aa1.47□□□□□ -2.17
HCS1YKL017C YLR462WO13556 202 aa1.46□□□□□ -2.18
HCS1YKL017C YPR170W-BP0C5R9 85 aa1.46□□□□□ -2.18
HCS1YKL017C SPT14P32363 452 aa1.46□□□□□ -2.18
HCS1YKL017C HYM1P32464 399 aa1.46□□□□□ -2.18
HCS1YKL017C SFC1P33303 322 aa1.46□□□□□ -2.18
HCS1YKL017C YBR063CP38083 404 aa1.46□□□□□ -2.18
HCS1YKL017C YEL075CP39972 122 aa1.46□□□□□ -2.18
HCS1YKL017C TSC11P40061 1430 aa1.46□□□□□ -2.18
HCS1YKL017C AYR1P40471 297 aa1.46□□□□□ -2.18
HCS1YKL017C GLR1P41921 483 aaKnown RBP1.46□□□□□ -2.18
HCS1YKL017C APS2Q00381 147 aa1.46□□□□□ -2.18
HCS1YKL017C CWC27Q02770 301 aa1.46□□□□□ -2.18
HCS1YKL017C ECM19Q06011 112 aa1.46□□□□□ -2.18
HCS1YKL017C TRM3Q07527 1436 aa1.46□□□□□ -2.18
HCS1YKL017C SMC4Q12267 1418 aa1.46□□□□□ -2.18
HCS1YKL017C YPL247CQ12523 523 aa1.46□□□□□ -2.18
HCS1YKL017C NUP157P40064 1391 aaKnown RBP1.46□□□□□ -2.18
HCS1YKL017C BUD4P47136 1447 aa1.46□□□□□ -2.18
HCS1YKL017C RPB3P16370 318 aaKnown RBP1.46□□□□□ -2.18
HCS1YKL017C RPC19P28000 142 aaKnown RBP1.46□□□□□ -2.18
HCS1YKL017C SNC2P33328 115 aa1.46□□□□□ -2.18
HCS1YKL017C YKR070WP36151 352 aaKnown RBP1.46□□□□□ -2.18
HCS1YKL017C MRPL17P36528 281 aa1.46□□□□□ -2.18
HCS1YKL017C TDA4P47153 279 aa1.46□□□□□ -2.18
HCS1YKL017C HHO1P53551 258 aa1.46□□□□□ -2.18
HCS1YKL017C ALG9P53868 555 aaKnown RBP1.46□□□□□ -2.18
HCS1YKL017C VPS71Q03433 280 aa1.46□□□□□ -2.18
HCS1YKL017C API2Q04413 109 aa1.46□□□□□ -2.18
HCS1YKL017C YDR115WQ04598 105 aa1.46□□□□□ -2.18
HCS1YKL017C MCP1Q12106 302 aa1.46□□□□□ -2.18
HCS1YKL017C SMT3Q12306 101 aaKnown RBP1.46□□□□□ -2.18
HCS1YKL017C PSF1Q12488 208 aa1.46□□□□□ -2.18
HCS1YKL017C YOR020W-AQ3E824 90 aa1.46□□□□□ -2.18
HCS1YKL017C YML100W-AQ8TGT0 57 aa1.46□□□□□ -2.18
HCS1YKL017C UFD4P33202 1483 aa1.46□□□□□ -2.18
HCS1YKL017C ATP5P09457 212 aa1.45□□□□□ -2.18
HCS1YKL017C DDI2P0CH63 225 aa1.45□□□□□ -2.18
HCS1YKL017C DDI3P0CH64 225 aa1.45□□□□□ -2.18
HCS1YKL017C TIR1P10863 254 aa1.45□□□□□ -2.18
HCS1YKL017C PHO85P17157 305 aa1.45□□□□□ -2.18
HCS1YKL017C ATP15P21306 62 aa1.45□□□□□ -2.18
HCS1YKL017C RPB9P27999 122 aa1.45□□□□□ -2.18
HCS1YKL017C SDH3P33421 198 aa1.45□□□□□ -2.18
HCS1YKL017C PTC1P35182 281 aa1.45□□□□□ -2.18
HCS1YKL017C OM14P38325 134 aa1.45□□□□□ -2.18
HCS1YKL017C YHL026CP38740 315 aa1.45□□□□□ -2.18
HCS1YKL017C NSG1P38837 291 aa1.45□□□□□ -2.18
HCS1YKL017C TEM1P38987 245 aa1.45□□□□□ -2.18
HCS1YKL017C YNL200CP40165 246 aaKnown RBP1.45□□□□□ -2.18
HCS1YKL017C YJL218WP40892 196 aaKnown RBP1.45□□□□□ -2.18
HCS1YKL017C SYS1P41544 203 aa1.45□□□□□ -2.18
HCS1YKL017C YFL019CP43576 117 aa1.45□□□□□ -2.18
HCS1YKL017C SFT1P43682 97 aa1.45□□□□□ -2.18
HCS1YKL017C RPE1P46969 238 aa1.45□□□□□ -2.18
HCS1YKL017C YGR039WP53225 103 aa1.45□□□□□ -2.18
HCS1YKL017C TMA23Q03525 211 aa1.45□□□□□ -2.18
HCS1YKL017C CGI121Q03705 181 aaKnown RBP1.45□□□□□ -2.18
HCS1YKL017C MCH1Q07376 486 aa1.45□□□□□ -2.18
HCS1YKL017C YPL264CQ08980 353 aa1.45□□□□□ -2.18
HCS1YKL017C YDL211CQ12121 372 aa1.45□□□□□ -2.18
HCS1YKL017C SPC3Q12133 184 aa1.45□□□□□ -2.18
HCS1YKL017C IES3Q12345 250 aa1.45□□□□□ -2.18
HCS1YKL017C YLR118CQ12354 227 aa1.45□□□□□ -2.18
HCS1YKL017C ATO3Q12359 275 aa1.45□□□□□ -2.18
HCS1YKL017C YCL001W-BQ96VH2 84 aa1.45□□□□□ -2.18
HCS1YKL017C YLR419WQ06698 1435 aaKnown RBP1.45□□□□□ -2.18
HCS1YKL017C SPT6P23615 1451 aaKnown RBP1.44□□□□□ -2.18
HCS1YKL017C MMS22Q06164 1454 aa1.44□□□□□ -2.18
HCS1YKL017C FMP49A0A023PZB3 126 aa1.44□□□□□ -2.18
HCS1YKL017C REP2P03872 296 aa1.44□□□□□ -2.18
HCS1YKL017C YLR156WP0CE96 114 aa1.44□□□□□ -2.18
HCS1YKL017C YLR159WP0CE97 114 aa1.44□□□□□ -2.18
HCS1YKL017C YLR161WP0CE98 114 aa1.44□□□□□ -2.18
HCS1YKL017C BET1P22804 142 aa1.44□□□□□ -2.18
HCS1YKL017C SRP21P32342 167 aa1.44□□□□□ -2.18
HCS1YKL017C YBL010CP32788 280 aa1.44□□□□□ -2.18
HCS1YKL017C FYV4P38783 130 aaPredicted RBP1.44□□□□□ -2.18
HCS1YKL017C YHR140WP38842 239 aa1.44□□□□□ -2.18
HCS1YKL017C MIG3P39943 394 aa1.44□□□□□ -2.18
HCS1YKL017C YER181CP40097 107 aa1.44□□□□□ -2.18
HCS1YKL017C SER2P42941 309 aa1.44□□□□□ -2.18
HCS1YKL017C GPI2P46961 280 aa1.44□□□□□ -2.18
HCS1YKL017C XPT1P47165 209 aa1.44□□□□□ -2.18
HCS1YKL017C YGL118CP53132 145 aa1.44□□□□□ -2.18
HCS1YKL017C TIM13P53299 105 aa1.44□□□□□ -2.18
HCS1YKL017C IGO1P53897 168 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms