RNA–Protein interactions for RNA: YJL097W

PHS1, Transcript of Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane, yeast

Gene PHS1, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHS1	YJL097W	TCD1	P38756	429 aa		0.77	□□□□□ -2.29
PHS1	YJL097W	YIR020C	P40575	100 aa		0.77	□□□□□ -2.29
PHS1	YJL097W	SPG3	Q04398	127 aa	Predicted RBP	0.77	□□□□□ -2.29
PHS1	YJL097W	RIM9	Q04734	239 aa		0.77	□□□□□ -2.29
PHS1	YJL097W	KAP95	Q06142	861 aa	Known RBP	0.77	□□□□□ -2.29
PHS1	YJL097W	YOR029W	Q12243	111 aa		0.77	□□□□□ -2.29
PHS1	YJL097W	YLR126C	Q12288	251 aa		0.77	□□□□□ -2.29
PHS1	YJL097W	VAR1	P02381	398 aa		0.76	□□□□□ -2.29
PHS1	YJL097W	FIG1	P38224	298 aa		0.76	□□□□□ -2.29
PHS1	YJL097W	URA8	P38627	578 aa	Predicted RBP	0.76	□□□□□ -2.29
PHS1	YJL097W	YNL217W	P40152	326 aa		0.76	□□□□□ -2.29
PHS1	YJL097W	PGD1	P40356	397 aa		0.76	□□□□□ -2.29
PHS1	YJL097W	BNA6	P43619	295 aa		0.76	□□□□□ -2.29
PHS1	YJL097W	GPI8	P49018	411 aa		0.76	□□□□□ -2.29
PHS1	YJL097W	YNL010W	P53981	241 aa	Known RBP	0.76	□□□□□ -2.29
PHS1	YJL097W	PEX11	Q12462	236 aa		0.76	□□□□□ -2.29
PHS1	YJL097W	PSF1	Q12488	208 aa		0.76	□□□□□ -2.29
PHS1	YJL097W	RPL27B	P0C2H7	136 aa	Known RBP	0.75	□□□□□ -2.29
PHS1	YJL097W	FZF1	P32805	299 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	RPS27A	P35997	82 aa	Known RBP	0.75	□□□□□ -2.29
PHS1	YJL097W	VPS21	P36017	210 aa	Known RBP	0.75	□□□□□ -2.29
PHS1	YJL097W	RIB1	P38066	345 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	RPS27B	P38711	82 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	NUP57	P48837	541 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	BOL2	P53082	120 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	MRPL50	P53724	139 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	PGA2	P53903	129 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	FMN1	Q03778	218 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	KRE28	Q04431	385 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	SMD2	Q06217	110 aa	Known RBP	0.75	□□□□□ -2.29
PHS1	YJL097W	YPL162C	Q12042	273 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	RRP36	Q12481	300 aa	Predicted RBP	0.75	□□□□□ -2.29
PHS1	YJL097W	YPL229W	Q99395	206 aa		0.75	□□□□□ -2.29
PHS1	YJL097W	YUH1	P35127	236 aa		0.74	□□□□□ -2.29
PHS1	YJL097W	HOC1	P47124	396 aa		0.74	□□□□□ -2.29
PHS1	YJL097W	DOC1	P53068	250 aa		0.74	□□□□□ -2.29
PHS1	YJL097W	MPA43	P53583	542 aa	Predicted RBP	0.74	□□□□□ -2.29
PHS1	YJL097W	CUS2	P53830	285 aa	Predicted RBP	0.74	□□□□□ -2.29
PHS1	YJL097W	YMD8	Q03697	442 aa		0.74	□□□□□ -2.29
PHS1	YJL097W	ANT1	Q06497	328 aa		0.74	□□□□□ -2.29
PHS1	YJL097W	PAM18	Q07914	168 aa		0.74	□□□□□ -2.29
PHS1	YJL097W	UIP4	Q08926	304 aa		0.74	□□□□□ -2.29
PHS1	YJL097W	RTR2	Q12378	196 aa		0.74	□□□□□ -2.29
PHS1	YJL097W	REP2	P03872	296 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	CDC36	P06100	191 aa	Predicted RBP	0.73	□□□□□ -2.29
PHS1	YJL097W	YPR170W-B	P0C5R9	85 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	TFC1	P32367	649 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	PRS3	P38689	320 aa	Known RBP	0.73	□□□□□ -2.29
PHS1	YJL097W	MCM22	P47167	239 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	AIF1	P52923	378 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	UBC7	Q02159	165 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	TRM12	Q04235	462 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	FUS2	Q05670	677 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	YPR114W	Q06107	315 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	YLR173W	Q06247	608 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	RRT8	Q08219	342 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	YPR202W	Q08993	238 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	ATG31	Q12421	196 aa		0.73	□□□□□ -2.29
PHS1	YJL097W	LSO2	Q3E772	92 aa	Known RBP	0.73	□□□□□ -2.29
PHS1	YJL097W	YHR139C-A	O13536	103 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	QCR8	P08525	94 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	STP22	P25604	385 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	RPT5	P33297	434 aa	Known RBP	0.72	□□□□□ -2.29
PHS1	YJL097W	UMP1	P38293	148 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	CUE1	P38428	203 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	YER076C	P40049	302 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	PEX17	P40155	199 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	YRB2	P40517	327 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	YJR149W	P47177	404 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	SAY1	P53324	424 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	Q0144	Q9ZZW2	109 aa		0.72	□□□□□ -2.29
PHS1	YJL097W	MRPS28	P21771	286 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	MRPL25	P23369	157 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	SRB4	P32569	687 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	YET1	P35723	206 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	YBR209W	P38311	105 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	DOG2	P38773	246 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	CYC2	P38909	366 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	YEL073C	P39974	107 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	IRC22	P40006	225 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	NSA1	P53136	463 aa	Predicted RBP	0.71	□□□□□ -2.3
PHS1	YJL097W	POP3	P53833	195 aa	Predicted RBP	0.71	□□□□□ -2.3
PHS1	YJL097W	YDL180W	Q12301	547 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	MED4	Q12343	284 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	YOR032W-A	Q8TGS1	66 aa		0.71	□□□□□ -2.3
PHS1	YJL097W	SPT3	P06844	337 aa		0.7	□□□□□ -2.3
PHS1	YJL097W	ATG22	P25568	528 aa		0.7	□□□□□ -2.3
PHS1	YJL097W	SNC2	P33328	115 aa		0.7	□□□□□ -2.3
PHS1	YJL097W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.7	□□□□□ -2.3	not detected
PHS1	YJL097W	RIO2	P40160	425 aa	Known RBP	0.7	□□□□□ -2.3
PHS1	YJL097W	RAD17	P48581	401 aa		0.7	□□□□□ -2.3
PHS1	YJL097W	SBH2	P52871	88 aa		0.7	□□□□□ -2.3
PHS1	YJL097W	SNZ1	Q03148	297 aa		0.7	□□□□□ -2.3
PHS1	YJL097W	YMR007W	Q03675	126 aa		0.7	□□□□□ -2.3
PHS1	YJL097W	LPP1	Q04396	274 aa		0.7	□□□□□ -2.3
PHS1	YJL097W	NCB2	Q92317	146 aa		0.7	□□□□□ -2.3
PHS1	YJL097W	RPO26	P20435	155 aa		0.69	□□□□□ -2.3
PHS1	YJL097W	CDC10	P25342	322 aa	Known RBP	0.69	□□□□□ -2.3
PHS1	YJL097W	MRPL28	P36527	147 aa		0.69	□□□□□ -2.3
PHS1	YJL097W	LDB7	P38210	180 aa		0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms