RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W YNL184CP53876 108 aa1.65□□□□□ -2.15
SSF1YHR066W COG5P53951 403 aa1.65□□□□□ -2.15
SSF1YHR066W ABF2Q02486 183 aa1.65□□□□□ -2.15
SSF1YHR066W GRH1Q04410 372 aaKnown RBP1.65□□□□□ -2.15
SSF1YHR066W FCF1Q05498 189 aaPredicted RBP1.65□□□□□ -2.15
SSF1YHR066W YLR036CQ07986 203 aa1.65□□□□□ -2.15
SSF1YHR066W YOL024WQ08172 172 aa1.65□□□□□ -2.15
SSF1YHR066W YOL160WQ08321 113 aa1.65□□□□□ -2.15
SSF1YHR066W YPL257WQ08974 193 aa1.65□□□□□ -2.15
SSF1YHR066W YLR050CQ12155 161 aaKnown RBP1.65□□□□□ -2.15
SSF1YHR066W TDA8Q6B2U8 126 aa1.65□□□□□ -2.15
SSF1YHR066W YHR214C-EQ8TGK0 99 aa1.65□□□□□ -2.15
SSF1YHR066W IGO2Q9P305 131 aa1.65□□□□□ -2.15
SSF1YHR066W GCN1P33892 2672 aaKnown RBP1.64□□□□□ -2.15
SSF1YHR066W IRA2P19158 3079 aa1.64□□□□□ -2.15
SSF1YHR066W RPL25P04456 142 aaKnown RBP1.64□□□□□ -2.15
SSF1YHR066W SGA1P08019 549 aa1.64□□□□□ -2.15
SSF1YHR066W DSF1P0CX08 502 aa1.64□□□□□ -2.15
SSF1YHR066W YNR073CP0CX09 502 aa1.64□□□□□ -2.15
SSF1YHR066W TRX3P25372 127 aa1.64□□□□□ -2.15
SSF1YHR066W YCR090CP25654 182 aaKnown RBP1.64□□□□□ -2.15
SSF1YHR066W ARO7P32178 256 aa1.64□□□□□ -2.15
SSF1YHR066W RCN1P36054 211 aa1.64□□□□□ -2.15
SSF1YHR066W FIG1P38224 298 aa1.64□□□□□ -2.15
SSF1YHR066W IRC22P40006 225 aa1.64□□□□□ -2.15
SSF1YHR066W RSM10Q03201 203 aa1.64□□□□□ -2.15
SSF1YHR066W LPP1Q04396 274 aa1.64□□□□□ -2.15
SSF1YHR066W YOR283WQ12040 230 aaKnown RBP1.64□□□□□ -2.15
SSF1YHR066W GEP5Q12393 293 aa1.64□□□□□ -2.15
SSF1YHR066W YDL085C-AQ3E7B7 68 aaKnown RBP1.64□□□□□ -2.15
SSF1YHR066W YOR020W-AQ3E824 90 aa1.64□□□□□ -2.15
SSF1YHR066W LAA1P39526 2014 aa1.64□□□□□ -2.15
SSF1YHR066W SIR2P06700 562 aa1.63□□□□□ -2.15
SSF1YHR066W DPM1P14020 267 aaKnown RBP1.63□□□□□ -2.15
SSF1YHR066W FCY2P17064 533 aa1.63□□□□□ -2.15
SSF1YHR066W MAG1P22134 296 aaKnown RBP1.63□□□□□ -2.15
SSF1YHR066W CNB1P25296 175 aa1.63□□□□□ -2.15
SSF1YHR066W SEC17P32602 292 aa1.63□□□□□ -2.15
SSF1YHR066W YBR063CP38083 404 aa1.63□□□□□ -2.15
SSF1YHR066W DER1P38307 211 aa1.63□□□□□ -2.15
SSF1YHR066W COS8P38723 381 aa1.63□□□□□ -2.15
SSF1YHR066W RMD6P39975 231 aa1.63□□□□□ -2.15
SSF1YHR066W HMF1P40037 129 aaKnown RBP1.63□□□□□ -2.15
SSF1YHR066W YNL010WP53981 241 aaKnown RBP1.63□□□□□ -2.15
SSF1YHR066W NUP49Q02199 472 aa1.63□□□□□ -2.15
SSF1YHR066W GAS3Q03655 524 aa1.63□□□□□ -2.15
SSF1YHR066W YMD8Q03697 442 aa1.63□□□□□ -2.15
SSF1YHR066W BRX1Q08235 291 aaKnown RBP1.63□□□□□ -2.15
SSF1YHR066W NSL1Q12143 216 aa1.63□□□□□ -2.15
SSF1YHR066W BBP1Q12365 385 aa1.63□□□□□ -2.15
SSF1YHR066W FLO1P32768 1537 aa1.63□□□□□ -2.15
SSF1YHR066W LYS2P07702 1392 aa1.63□□□□□ -2.15
SSF1YHR066W MBF1O14467 151 aaKnown RBP1.62□□□□□ -2.15
SSF1YHR066W CUP1-1P0CX80 61 aa1.62□□□□□ -2.15
SSF1YHR066W CUP1-2P0CX81 61 aa1.62□□□□□ -2.15
SSF1YHR066W AHC2P25649 128 aa1.62□□□□□ -2.15
SSF1YHR066W NVJ1P38881 321 aa1.62□□□□□ -2.15
SSF1YHR066W EDC3P39998 551 aaKnown RBP1.62□□□□□ -2.15
SSF1YHR066W LSM4P40070 187 aaKnown RBP1.62□□□□□ -2.15
SSF1YHR066W FIS1P40515 155 aa1.62□□□□□ -2.15
SSF1YHR066W YGL235WP53071 178 aa1.62□□□□□ -2.15
SSF1YHR066W RRP17Q04031 235 aaPredicted RBP1.62□□□□□ -2.15
SSF1YHR066W PEX12Q04370 399 aa1.62□□□□□ -2.15
SSF1YHR066W RDS3Q06835 107 aaPredicted RBP1.62□□□□□ -2.15
SSF1YHR066W YLR053CQ12026 108 aa1.62□□□□□ -2.15
SSF1YHR066W RIO1Q12196 484 aaKnown RBP1.62□□□□□ -2.15
SSF1YHR066W FMP27Q06179 2628 aa1.62□□□□□ -2.15
SSF1YHR066W PRP8P33334 2413 aaKnown RBP1.61□□□□□ -2.15
SSF1YHR066W YPR170W-BP0C5R9 85 aa1.61□□□□□ -2.15
SSF1YHR066W RPS24AP0CX31 135 aaKnown RBP1.61□□□□□ -2.15
SSF1YHR066W RPS24BP0CX32 135 aaKnown RBP1.61□□□□□ -2.15
SSF1YHR066W SNF4P12904 322 aa1.61□□□□□ -2.15
SSF1YHR066W UTP30P36144 274 aaKnown RBP1.61□□□□□ -2.15
SSF1YHR066W POP4P38336 279 aa1.61□□□□□ -2.15
SSF1YHR066W YAR068WP39564 161 aa1.61□□□□□ -2.15
SSF1YHR066W RSM25P40496 264 aa1.61□□□□□ -2.15
SSF1YHR066W FMP32P43557 207 aa1.61□□□□□ -2.15
SSF1YHR066W OST2P46964 130 aa1.61□□□□□ -2.15
SSF1YHR066W LSM1P47017 172 aaKnown RBP1.61□□□□□ -2.15
SSF1YHR066W YJR146WP47174 117 aa1.61□□□□□ -2.15
SSF1YHR066W YDC1Q02896 317 aa1.61□□□□□ -2.15
SSF1YHR066W YOR268CQ08734 132 aa1.61□□□□□ -2.15
SSF1YHR066W VPS68Q12016 184 aa1.61□□□□□ -2.15
SSF1YHR066W YPL162CQ12042 273 aa1.61□□□□□ -2.15
SSF1YHR066W RDI1Q12434 202 aa1.61□□□□□ -2.15
SSF1YHR066W YFR032C-BQ8TGU2 87 aa1.61□□□□□ -2.15
SSF1YHR066W PET20Q99373 253 aa1.61□□□□□ -2.15
SSF1YHR066W IRA1P18963 3092 aa1.61□□□□□ -2.15
SSF1YHR066W CMD1P06787 147 aaKnown RBP1.6□□□□□ -2.15
SSF1YHR066W RAD10P06838 210 aa1.6□□□□□ -2.15
SSF1YHR066W RPS28BP0C0X0 67 aaKnown RBP1.6□□□□□ -2.15
SSF1YHR066W YLR156WP0CE96 114 aa1.6□□□□□ -2.15
SSF1YHR066W YLR159WP0CE97 114 aa1.6□□□□□ -2.15
SSF1YHR066W YLR161WP0CE98 114 aa1.6□□□□□ -2.15
SSF1YHR066W PET9P18239 318 aaKnown RBP1.6□□□□□ -2.15
SSF1YHR066W ATG22P25568 528 aa1.6□□□□□ -2.15
SSF1YHR066W FMP23P38231 175 aa1.6□□□□□ -2.15
SSF1YHR066W YGP1P38616 354 aaKnown RBP1.6□□□□□ -2.15
SSF1YHR066W YHR125WP38831 101 aa1.6□□□□□ -2.15
SSF1YHR066W AST2P39945 430 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms