RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	ODC2	Q99297	307 aa		4.1	□□□□□ -1.75
RSC30	YHR056C	SOD1	P00445	154 aa	Known RBP	4.09	□□□□□ -1.75
RSC30	YHR056C	HIS3	P06633	220 aa		4.09	□□□□□ -1.75
RSC30	YHR056C	CWC25	P53854	179 aa	Known RBP	4.09	□□□□□ -1.75
RSC30	YHR056C	DCP1	Q12517	231 aa	Predicted RBP	4.09	□□□□□ -1.75
RSC30	YHR056C	LAG1	P38703	411 aa		4.09	□□□□□ -1.75
RSC30	YHR056C	GRX5	Q02784	150 aa		4.09	□□□□□ -1.75
RSC30	YHR056C	MCM21	Q06675	368 aa		4.09	□□□□□ -1.75
RSC30	YHR056C	SEN2	P16658	377 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	PHD1	P36093	366 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	IMD2	P38697	523 aa	Known RBP	4.08	□□□□□ -1.76
RSC30	YHR056C	SIM1	P40472	476 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	LSM1	P47017	172 aa	Known RBP	4.08	□□□□□ -1.76
RSC30	YHR056C	BUD25	P85052	153 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	FEX1	Q08913	375 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	FEX2	Q08991	375 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	FPR2	P32472	135 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	OCA2	P53949	197 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	YNL146C-A	Q3E7Z1	64 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	HUG1	Q6Q5K6	68 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	RTS2	P40962	232 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	TMA17	Q12513	150 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	YBR126W-A	Q8TGU7	68 aa		4.08	□□□□□ -1.76
RSC30	YHR056C	GDT1	P38301	280 aa	Predicted RBP	4.07	□□□□□ -1.76
RSC30	YHR056C	YAR068W	P39564	161 aa		4.07	□□□□□ -1.76
RSC30	YHR056C	IRC23	Q08416	157 aa		4.07	□□□□□ -1.76
RSC30	YHR056C	AGC1	Q12482	902 aa		4.07	□□□□□ -1.76
RSC30	YHR056C	RPS11A	P0CX47	156 aa	Known RBP	4.07	□□□□□ -1.76
RSC30	YHR056C	RPS11B	P0CX48	156 aa	Known RBP	4.07	□□□□□ -1.76
RSC30	YHR056C	PUP1	P25043	261 aa		4.07	□□□□□ -1.76
RSC30	YHR056C	TRR1	P29509	319 aa	Known RBP	4.06	□□□□□ -1.76
RSC30	YHR056C	AGA2	P32781	87 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	YBL071C	P38185	102 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	PAM16	P42949	149 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	VHT1	P53241	593 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	ZRC1	P20107	442 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	CPR4	P25334	318 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	MIG3	P39943	394 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	YIL060W	P40519	144 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	YIP3	P53633	176 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	PAM18	Q07914	168 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	YCR075W-A	Q3E830	75 aa		4.06	□□□□□ -1.76
RSC30	YHR056C	RPL2A	P0CX45	254 aa	Known RBP	4.05	□□□□□ -1.76
RSC30	YHR056C	RPL2B	P0CX46	254 aa	Known RBP	4.05	□□□□□ -1.76
RSC30	YHR056C	AFR1	P33304	620 aa		4.05	□□□□□ -1.76
RSC30	YHR056C	LSM12	P38828	187 aa	Known RBP	4.05	□□□□□ -1.76
RSC30	YHR056C	MDJ2	P42834	146 aa		4.05	□□□□□ -1.76
RSC30	YHR056C	GPI2	P46961	280 aa		4.05	□□□□□ -1.76
RSC30	YHR056C	MRPS8	Q03799	155 aa		4.05	□□□□□ -1.76
RSC30	YHR056C	YMR244W	Q04018	355 aa		4.05	□□□□□ -1.76
RSC30	YHR056C	LOA1	Q06508	300 aa		4.05	□□□□□ -1.76
RSC30	YHR056C	TIR4	Q12218	487 aa	Predicted RBP	4.05	□□□□□ -1.76
RSC30	YHR056C	YPS3	Q12303	508 aa		4.05	□□□□□ -1.76
RSC30	YHR056C	NPL6	P32832	435 aa		4.05	□□□□□ -1.76
RSC30	YHR056C	MRPL27	P36526	146 aa	Predicted RBP	4.05	□□□□□ -1.76
RSC30	YHR056C	ARP3	P47117	449 aa	Known RBP	4.05	□□□□□ -1.76
RSC30	YHR056C	RBD2	Q12270	262 aa		4.05	□□□□□ -1.76
RSC30	YHR056C	OTU1	P43558	301 aa		4.04	□□□□□ -1.76
RSC30	YHR056C	YML018C	Q03730	393 aa		4.04	□□□□□ -1.76
RSC30	YHR056C	SCP1	Q08873	200 aa		4.04	□□□□□ -1.76
RSC30	YHR056C	CUP2	P15315	225 aa		4.04	□□□□□ -1.76
RSC30	YHR056C	FMT1	P32785	401 aa		4.04	□□□□□ -1.76
RSC30	YHR056C	YGL015C	P33199	130 aa		4.04	□□□□□ -1.76
RSC30	YHR056C	MSO1	P53604	210 aa	Known RBP	4.04	□□□□□ -1.76
RSC30	YHR056C	SMX3	P54999	86 aa	Predicted RBP	4.04	□□□□□ -1.76
RSC30	YHR056C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
RSC30	YHR056C	YPL229W	Q99395	206 aa		4.04	□□□□□ -1.76
RSC30	YHR056C	EST3	Q03096	181 aa		4.03	□□□□□ -1.76
RSC30	YHR056C	THI74	Q04083	370 aa		4.03	□□□□□ -1.76
RSC30	YHR056C	SDH7	Q04401	133 aa		4.03	□□□□□ -1.76
RSC30	YHR056C	PET20	Q99373	253 aa		4.03	□□□□□ -1.76
RSC30	YHR056C	SIP1	P32578	815 aa		4.03	□□□□□ -1.76
RSC30	YHR056C	CMC1	P36064	111 aa		4.03	□□□□□ -1.76
RSC30	YHR056C	MSH5	Q12175	901 aa		4.03	□□□□□ -1.76
RSC30	YHR056C	YJL027C	P47063	138 aa	Predicted RBP	4.02	□□□□□ -1.77
RSC30	YHR056C	YJR015W	P47090	510 aa		4.02	□□□□□ -1.77
RSC30	YHR056C	MRPL35	Q06678	367 aa		4.02	□□□□□ -1.77
RSC30	YHR056C	VMA16	P23968	213 aa		4.02	□□□□□ -1.77
RSC30	YHR056C	MST28	P39552	234 aa		4.02	□□□□□ -1.77
RSC30	YHR056C	MST27	P53176	234 aa		4.02	□□□□□ -1.77
RSC30	YHR056C	SYM1	Q06563	197 aa		4.02	□□□□□ -1.77
RSC30	YHR056C	ISU1	Q03020	165 aa		4.01	□□□□□ -1.77
RSC30	YHR056C	SNO1	Q03144	224 aa		4.01	□□□□□ -1.77
RSC30	YHR056C	ATG41	Q12048	136 aa		4.01	□□□□□ -1.77
RSC30	YHR056C	CAP2	P13517	287 aa		4.01	□□□□□ -1.77
RSC30	YHR056C	PCL6	P40038	420 aa		4.01	□□□□□ -1.77
RSC30	YHR056C	NSA2	P40078	261 aa	Known RBP	4.01	□□□□□ -1.77
RSC30	YHR056C	SPC1	P46965	94 aa		4.01	□□□□□ -1.77
RSC30	YHR056C	MCM22	P47167	239 aa		4.01	□□□□□ -1.77
RSC30	YHR056C	DCS1	Q06151	350 aa		4.01	□□□□□ -1.77
RSC30	YHR056C	GOS1	P38736	223 aa		4	□□□□□ -1.77
RSC30	YHR056C	BDH1	P39714	382 aa		4	□□□□□ -1.77
RSC30	YHR056C	DFG10	P40526	253 aa		4	□□□□□ -1.77
RSC30	YHR056C	KEI1	Q06346	221 aa		4	□□□□□ -1.77
RSC30	YHR056C	POS5	Q06892	414 aa		4	□□□□□ -1.77
RSC30	YHR056C	YOR385W	Q08909	290 aa		4	□□□□□ -1.77
RSC30	YHR056C	SCM3	Q12334	223 aa		4	□□□□□ -1.77
RSC30	YHR056C	RPS18A	P0CX55	146 aa	Known RBP	4	□□□□□ -1.77
RSC30	YHR056C	RPS18B	P0CX56	146 aa	Predicted RBP	4	□□□□□ -1.77
RSC30	YHR056C	HOM6	P31116	359 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms