RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C MAG1P22134 296 aaKnown RBP1.58□□□□□ -2.16
PRP38YGR075C PTM1P32857 523 aa1.58□□□□□ -2.16
PRP38YGR075C SKG1P36169 355 aa1.58□□□□□ -2.16
PRP38YGR075C SVP26P38869 228 aa1.58□□□□□ -2.16
PRP38YGR075C ICE2P40499 491 aa1.58□□□□□ -2.16
PRP38YGR075C YRB2P40517 327 aa1.58□□□□□ -2.16
PRP38YGR075C NOP19P53317 196 aaPredicted RBP1.58□□□□□ -2.16
PRP38YGR075C YDR249CQ03787 373 aa1.58□□□□□ -2.16
PRP38YGR075C YNG1Q08465 219 aa1.58□□□□□ -2.16
PRP38YGR075C YPL162CQ12042 273 aa1.58□□□□□ -2.16
PRP38YGR075C TSC3Q3E790 80 aa1.58□□□□□ -2.16
PRP38YGR075C YHR214C-EQ8TGK0 99 aa1.58□□□□□ -2.16
PRP38YGR075C RPL25P04456 142 aaKnown RBP1.57□□□□□ -2.16
PRP38YGR075C DDI2P0CH63 225 aa1.57□□□□□ -2.16
PRP38YGR075C DDI3P0CH64 225 aa1.57□□□□□ -2.16
PRP38YGR075C KSS1P14681 368 aa1.57□□□□□ -2.16
PRP38YGR075C PET9P18239 318 aaKnown RBP1.57□□□□□ -2.16
PRP38YGR075C MRPL17P36528 281 aa1.57□□□□□ -2.16
PRP38YGR075C AST2P39945 430 aaKnown RBP1.57□□□□□ -2.16
PRP38YGR075C AYR1P40471 297 aa1.57□□□□□ -2.16
PRP38YGR075C EAF6P47128 113 aa1.57□□□□□ -2.16
PRP38YGR075C ERG25P53045 309 aa1.57□□□□□ -2.16
PRP38YGR075C DOC1P53068 250 aa1.57□□□□□ -2.16
PRP38YGR075C COG5P53951 403 aa1.57□□□□□ -2.16
PRP38YGR075C CYT2Q00873 224 aa1.57□□□□□ -2.16
PRP38YGR075C GGA1Q06336 557 aa1.57□□□□□ -2.16
PRP38YGR075C BOL1Q3E793 110 aa1.57□□□□□ -2.16
PRP38YGR075C YIL177CP40434 1758 aa1.57□□□□□ -2.16
PRP38YGR075C YJL225CP40889 1758 aa1.57□□□□□ -2.16
PRP38YGR075C TIM9O74700 87 aa1.56□□□□□ -2.16
PRP38YGR075C RPL27AP0C2H6 136 aaKnown RBP1.56□□□□□ -2.16
PRP38YGR075C RPL27BP0C2H7 136 aaKnown RBP1.56□□□□□ -2.16
PRP38YGR075C MRPS28P21771 286 aa1.56□□□□□ -2.16
PRP38YGR075C UMP1P38293 148 aa1.56□□□□□ -2.16
PRP38YGR075C YHR022CP38763 256 aa1.56□□□□□ -2.16
PRP38YGR075C HMF1P40037 129 aaKnown RBP1.56□□□□□ -2.16
PRP38YGR075C TIR3P40552 269 aa1.56□□□□□ -2.16
PRP38YGR075C BOL2P53082 120 aa1.56□□□□□ -2.16
PRP38YGR075C MDM32Q12171 622 aa1.56□□□□□ -2.16
PRP38YGR075C URA5P13298 226 aaKnown RBP1.55□□□□□ -2.16
PRP38YGR075C RPB3P16370 318 aaKnown RBP1.55□□□□□ -2.16
PRP38YGR075C BET1P22804 142 aa1.55□□□□□ -2.16
PRP38YGR075C ADE1P27616 306 aa1.55□□□□□ -2.16
PRP38YGR075C MMS2P53152 137 aa1.55□□□□□ -2.16
PRP38YGR075C YFR032C-BQ8TGU2 87 aa1.55□□□□□ -2.16
PRP38YGR075C ASF2P32448 525 aaPredicted RBP1.54□□□□□ -2.16
PRP38YGR075C SNC2P33328 115 aa1.54□□□□□ -2.16
PRP38YGR075C YET1P35723 206 aa1.54□□□□□ -2.16
PRP38YGR075C DSE2P38844 325 aa1.54□□□□□ -2.16
PRP38YGR075C PEP8P40335 379 aa1.54□□□□□ -2.16
PRP38YGR075C AGE2P40529 298 aa1.54□□□□□ -2.16
PRP38YGR075C GVP36P40531 326 aaKnown RBP1.54□□□□□ -2.16
PRP38YGR075C AIM25P47140 327 aa1.54□□□□□ -2.16
PRP38YGR075C YOL160WQ08321 113 aa1.54□□□□□ -2.16
PRP38YGR075C GPM2Q12008 311 aa1.54□□□□□ -2.16
PRP38YGR075C FSF1Q12029 327 aaKnown RBP1.54□□□□□ -2.16
PRP38YGR075C IKI3Q06706 1349 aaKnown RBP1.54□□□□□ -2.16
PRP38YGR075C MRS1P07266 363 aa1.53□□□□□ -2.16
PRP38YGR075C RAD9P14737 1309 aa1.53□□□□□ -2.16
PRP38YGR075C ATP15P21306 62 aa1.53□□□□□ -2.16
PRP38YGR075C MDH2P22133 377 aa1.53□□□□□ -2.16
PRP38YGR075C CNB1P25296 175 aa1.53□□□□□ -2.16
PRP38YGR075C AVT2P39981 480 aa1.53□□□□□ -2.16
PRP38YGR075C ERG10P41338 398 aaKnown RBP1.53□□□□□ -2.16
PRP38YGR075C GIM3P53900 129 aa1.53□□□□□ -2.16
PRP38YGR075C FMP27Q06179 2628 aa1.53□□□□□ -2.16
PRP38YGR075C UTP20P35194 2493 aaKnown RBP1.52□□□□□ -2.17
PRP38YGR075C SEN1Q00416 2231 aaKnown RBP1.52□□□□□ -2.17
PRP38YGR075C SNF2P22082 1703 aa1.52□□□□□ -2.17
PRP38YGR075C IRA1P18963 3092 aa1.52□□□□□ -2.17
PRP38YGR075C CAT8P39113 1433 aa1.52□□□□□ -2.17
PRP38YGR075C PDR18P53756 1333 aa1.52□□□□□ -2.17
PRP38YGR075C SIR2P06700 562 aa1.52□□□□□ -2.17
PRP38YGR075C APA2P22108 325 aa1.52□□□□□ -2.17
PRP38YGR075C VTC1P40046 129 aaRIP-Chip data1.52□□□□□ -2.17not detected
PRP38YGR075C YNL217WP40152 326 aa1.52□□□□□ -2.17
PRP38YGR075C YFR054CP43622 192 aa1.52□□□□□ -2.17
PRP38YGR075C YNR077CP53758 84 aa1.52□□□□□ -2.17
PRP38YGR075C SML1Q04964 104 aa1.52□□□□□ -2.17
PRP38YGR075C YDR034W-BQ6Q5X2 51 aa1.52□□□□□ -2.17
PRP38YGR075C URB1P34241 1764 aaKnown RBP1.52□□□□□ -2.17
PRP38YGR075C PRP8P33334 2413 aaKnown RBP1.51□□□□□ -2.17
PRP38YGR075C CKS1P20486 150 aaKnown RBP1.51□□□□□ -2.17
PRP38YGR075C OCH1P31755 480 aa1.51□□□□□ -2.17
PRP38YGR075C FZF1P32805 299 aa1.51□□□□□ -2.17
PRP38YGR075C SHE2P36068 246 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
PRP38YGR075C YBR285WP38354 144 aa1.51□□□□□ -2.17
PRP38YGR075C GLE2P40066 365 aa1.51□□□□□ -2.17
PRP38YGR075C YNL184CP53876 108 aa1.51□□□□□ -2.17
PRP38YGR075C ARO80Q04052 950 aa1.51□□□□□ -2.17
PRP38YGR075C HNT1Q04344 158 aaKnown RBP1.51□□□□□ -2.17
PRP38YGR075C RRP5Q05022 1729 aaKnown RBP1.51□□□□□ -2.17
PRP38YGR075C MBF1O14467 151 aaKnown RBP1.5□□□□□ -2.17
PRP38YGR075C SKI6P46948 246 aaPredicted RBP1.5□□□□□ -2.17
PRP38YGR075C UBC12P52491 188 aa1.5□□□□□ -2.17
PRP38YGR075C RTC4P53850 401 aa1.5□□□□□ -2.17
PRP38YGR075C BUD25P85052 153 aa1.5□□□□□ -2.17
PRP38YGR075C YDR274CP87283 123 aa1.5□□□□□ -2.17
PRP38YGR075C ATG38Q05789 226 aaKnown RBP1.5□□□□□ -2.17
PRP38YGR075C ATG40Q99325 256 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms