RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W AYR1P40471 297 aa1.27□□□□□ -2.21
SMD1YGR074W SKI6P46948 246 aaPredicted RBP1.27□□□□□ -2.21
SMD1YGR074W YJR111CP47148 283 aaKnown RBP1.27□□□□□ -2.21
SMD1YGR074W YNR077CP53758 84 aa1.27□□□□□ -2.21
SMD1YGR074W CUE4Q04201 117 aaPredicted RBP1.27□□□□□ -2.21
SMD1YGR074W SML1Q04964 104 aa1.27□□□□□ -2.21
SMD1YGR074W YOL014WQ08110 124 aa1.27□□□□□ -2.21
SMD1YGR074W PEX11Q12462 236 aa1.27□□□□□ -2.21
SMD1YGR074W FLO9P39712 1322 aa1.26□□□□□ -2.21
SMD1YGR074W YAR023CD6VPM8 179 aa1.26□□□□□ -2.21
SMD1YGR074W RAS2P01120 322 aaKnown RBP1.26□□□□□ -2.21
SMD1YGR074W AHC2P25649 128 aa1.26□□□□□ -2.21
SMD1YGR074W MTW1P39731 289 aa1.26□□□□□ -2.21
SMD1YGR074W FCY21P40039 528 aa1.26□□□□□ -2.21
SMD1YGR074W ERJ5P43613 295 aaPredicted RBP1.26□□□□□ -2.21
SMD1YGR074W TDA4P47153 279 aa1.26□□□□□ -2.21
SMD1YGR074W UBC12P52491 188 aa1.26□□□□□ -2.21
SMD1YGR074W YIP3P53633 176 aa1.26□□□□□ -2.21
SMD1YGR074W IGO1P53897 168 aa1.26□□□□□ -2.21
SMD1YGR074W GRX5Q02784 150 aa1.26□□□□□ -2.21
SMD1YGR074W YMR099CQ03161 297 aaKnown RBP1.26□□□□□ -2.21
SMD1YGR074W SHH3Q04487 196 aa1.26□□□□□ -2.21
SMD1YGR074W YMR315WQ04869 349 aaKnown RBP1.26□□□□□ -2.21
SMD1YGR074W BRX1Q08235 291 aaKnown RBP1.26□□□□□ -2.21
SMD1YGR074W YOR342CQ12182 319 aa1.26□□□□□ -2.21
SMD1YGR074W MPD1Q12404 318 aaKnown RBP1.26□□□□□ -2.21
SMD1YGR074W FAS1P07149 2051 aaKnown RBP1.25□□□□□ -2.21
SMD1YGR074W YLR236CA0A023PZG4 107 aa1.25□□□□□ -2.21
SMD1YGR074W NSP1P14907 823 aaKnown RBP1.25□□□□□ -2.21
SMD1YGR074W GAA1P39012 614 aa1.25□□□□□ -2.21
SMD1YGR074W YFR054CP43622 192 aa1.25□□□□□ -2.21
SMD1YGR074W YLR460CP54007 376 aa1.25□□□□□ -2.21
SMD1YGR074W HPT1Q04178 221 aaKnown RBP1.25□□□□□ -2.21
SMD1YGR074W GRE1Q08969 168 aa1.25□□□□□ -2.21
SMD1YGR074W RAD28Q12021 506 aa1.25□□□□□ -2.21
SMD1YGR074W YLR050CQ12155 161 aaKnown RBP1.25□□□□□ -2.21
SMD1YGR074W YLR422WQ06409 1932 aa1.25□□□□□ -2.21
SMD1YGR074W PDR18P53756 1333 aa1.24□□□□□ -2.21
SMD1YGR074W POR1P04840 283 aaKnown RBP1.24□□□□□ -2.21
SMD1YGR074W CMD1P06787 147 aaKnown RBP1.24□□□□□ -2.21
SMD1YGR074W QCR2P07257 368 aa1.24□□□□□ -2.21
SMD1YGR074W YKL102CP34249 101 aa1.24□□□□□ -2.21
SMD1YGR074W TMA19P35691 167 aaKnown RBP1.24□□□□□ -2.21
SMD1YGR074W TVP38P36164 337 aa1.24□□□□□ -2.21
SMD1YGR074W NSG1P38837 291 aa1.24□□□□□ -2.21
SMD1YGR074W NVJ1P38881 321 aa1.24□□□□□ -2.21
SMD1YGR074W YER076CP40049 302 aa1.24□□□□□ -2.21
SMD1YGR074W CUP9P41817 306 aa1.24□□□□□ -2.21
SMD1YGR074W TIM13P53299 105 aa1.24□□□□□ -2.21
SMD1YGR074W PGA1P53896 198 aa1.24□□□□□ -2.21
SMD1YGR074W VPS71Q03433 280 aa1.24□□□□□ -2.21
SMD1YGR074W ANT1Q06497 328 aa1.24□□□□□ -2.21
SMD1YGR074W YDL180WQ12301 547 aa1.24□□□□□ -2.21
SMD1YGR074W RPL35AP0CX84 120 aaKnown RBP1.23□□□□□ -2.21
SMD1YGR074W RPL35BP0CX85 120 aaKnown RBP1.23□□□□□ -2.21
SMD1YGR074W SPO13P23624 291 aa1.23□□□□□ -2.21
SMD1YGR074W RAD51P25454 400 aa1.23□□□□□ -2.21
SMD1YGR074W YBR219CP38317 127 aa1.23□□□□□ -2.21
SMD1YGR074W GPI14P47088 403 aaKnown RBP1.23□□□□□ -2.21
SMD1YGR074W BAT2P47176 376 aaKnown RBP1.23□□□□□ -2.21
SMD1YGR074W KNH1P50112 268 aa1.23□□□□□ -2.21
SMD1YGR074W TMA20P89886 181 aaPredicted RBP1.23□□□□□ -2.21
SMD1YGR074W MAK3Q03503 176 aa1.23□□□□□ -2.21
SMD1YGR074W GPI17Q04080 534 aa1.23□□□□□ -2.21
SMD1YGR074W YPR174CQ06616 221 aaPredicted RBP1.23□□□□□ -2.21
SMD1YGR074W YHR007C-AQ07074 71 aa1.23□□□□□ -2.21
SMD1YGR074W YLR412C-AQ3E742 68 aa1.23□□□□□ -2.21
SMD1YGR074W YKR041WP36134 250 aa1.22□□□□□ -2.21
SMD1YGR074W RFC2P40348 353 aa1.22□□□□□ -2.21
SMD1YGR074W SBH1P52870 82 aa1.22□□□□□ -2.21
SMD1YGR074W POP3P53833 195 aaPredicted RBP1.22□□□□□ -2.21
SMD1YGR074W YNL247WP53852 767 aaKnown RBP1.22□□□□□ -2.21
SMD1YGR074W YDR476CQ03362 224 aa1.22□□□□□ -2.21
SMD1YGR074W YOL162WP0CF19 215 aa1.21□□□□□ -2.22
SMD1YGR074W SEC11P15367 167 aa1.21□□□□□ -2.22
SMD1YGR074W CLG1P35190 452 aa1.21□□□□□ -2.22
SMD1YGR074W MAK5P38112 773 aaPredicted RBP1.21□□□□□ -2.22
SMD1YGR074W YFL019CP43576 117 aa1.21□□□□□ -2.22
SMD1YGR074W XPT1P47165 209 aa1.21□□□□□ -2.22
SMD1YGR074W MPC3P53311 146 aa1.21□□□□□ -2.22
SMD1YGR074W MPA43P53583 542 aaPredicted RBP1.21□□□□□ -2.22
SMD1YGR074W YNL140CP53910 189 aa1.21□□□□□ -2.22
SMD1YGR074W VPS28Q02767 242 aa1.21□□□□□ -2.22
SMD1YGR074W YMR253CQ04835 414 aa1.21□□□□□ -2.22
SMD1YGR074W IRC23Q08416 157 aa1.21□□□□□ -2.22
SMD1YGR074W DGK1Q12382 290 aa1.21□□□□□ -2.22
SMD1YGR074W QCR8P08525 94 aa1.2□□□□□ -2.22
SMD1YGR074W RPS28BP0C0X0 67 aaKnown RBP1.2□□□□□ -2.22
SMD1YGR074W GPA2P10823 449 aa1.2□□□□□ -2.22
SMD1YGR074W TIR1P10863 254 aa1.2□□□□□ -2.22
SMD1YGR074W STP22P25604 385 aa1.2□□□□□ -2.22
SMD1YGR074W ARO7P32178 256 aa1.2□□□□□ -2.22
SMD1YGR074W SFK1P35735 353 aa1.2□□□□□ -2.22
SMD1YGR074W YKR045CP36138 183 aa1.2□□□□□ -2.22
SMD1YGR074W PAM17P36147 197 aa1.2□□□□□ -2.22
SMD1YGR074W FMP23P38231 175 aa1.2□□□□□ -2.22
SMD1YGR074W FES1P38260 290 aa1.2□□□□□ -2.22
SMD1YGR074W AME1P38313 324 aa1.2□□□□□ -2.22
SMD1YGR074W SPC25P40014 221 aa1.2□□□□□ -2.22
SMD1YGR074W NSA2P40078 261 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms