RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W FAR8Q05040 523 aa0.51□□□□□ -2.33
YCK3YER123W SSQ1Q05931 657 aaPredicted RBP0.51□□□□□ -2.33
YCK3YER123W ATG39Q06159 398 aa0.51□□□□□ -2.33
YCK3YER123W SNF8Q12483 233 aa0.51□□□□□ -2.33
YCK3YER123W TIM9O74700 87 aa0.5□□□□□ -2.33
YCK3YER123W MSW1P04803 379 aa0.5□□□□□ -2.33
YCK3YER123W DSF1P0CX08 502 aa0.5□□□□□ -2.33
YCK3YER123W YNR073CP0CX09 502 aa0.5□□□□□ -2.33
YCK3YER123W ROX3P25046 220 aa0.5□□□□□ -2.33
YCK3YER123W MDH3P32419 343 aaKnown RBP RIP-Chip data0.5□□□□□ -2.33not detected
YCK3YER123W RIB7P33312 244 aa0.5□□□□□ -2.33
YCK3YER123W MSA2P36157 363 aa0.5□□□□□ -2.33
YCK3YER123W LDB7P38210 180 aa0.5□□□□□ -2.33
YCK3YER123W FMP23P38231 175 aa0.5□□□□□ -2.33
YCK3YER123W ERV15P38312 142 aa0.5□□□□□ -2.33
YCK3YER123W YAR068WP39564 161 aa0.5□□□□□ -2.33
YCK3YER123W MEP1P40260 492 aa0.5□□□□□ -2.33
YCK3YER123W BMT5P40493 336 aa0.5□□□□□ -2.33
YCK3YER123W GPI8P49018 411 aa0.5□□□□□ -2.33
YCK3YER123W SNZ2P53824 298 aa0.5□□□□□ -2.33
YCK3YER123W YNL046WP53956 172 aa0.5□□□□□ -2.33
YCK3YER123W MRPS8Q03799 155 aa0.5□□□□□ -2.33
YCK3YER123W SPG4Q04438 115 aa0.5□□□□□ -2.33
YCK3YER123W USB1Q12208 290 aaKnown RBP0.5□□□□□ -2.33
YCK3YER123W GTT2Q12390 233 aa0.5□□□□□ -2.33
YCK3YER123W DCN1Q12395 269 aa0.5□□□□□ -2.33
YCK3YER123W HTL1Q9URQ5 78 aa0.5□□□□□ -2.33
YCK3YER123W RPL39P04650 51 aa0.49□□□□□ -2.33
YCK3YER123W OAC1P32332 324 aa0.49□□□□□ -2.33
YCK3YER123W YHR022CP38763 256 aa0.49□□□□□ -2.33
YCK3YER123W RRF1P38771 230 aa0.49□□□□□ -2.33
YCK3YER123W DOG1P38774 246 aa0.49□□□□□ -2.33
YCK3YER123W YKE4P40544 346 aa0.49□□□□□ -2.33
YCK3YER123W YGL159WP53110 370 aa0.49□□□□□ -2.33
YCK3YER123W GTR2P53290 341 aa0.49□□□□□ -2.33
YCK3YER123W YNR064CP53750 290 aa0.49□□□□□ -2.33
YCK3YER123W LSM3P57743 89 aaKnown RBP0.49□□□□□ -2.33
YCK3YER123W BUD25P85052 153 aa0.49□□□□□ -2.33
YCK3YER123W CYT2Q00873 224 aa0.49□□□□□ -2.33
YCK3YER123W RCE1Q03530 315 aa0.49□□□□□ -2.33
YCK3YER123W YMD8Q03697 442 aa0.49□□□□□ -2.33
YCK3YER123W YML108WQ03759 105 aa0.49□□□□□ -2.33
YCK3YER123W MEU1Q07938 337 aaKnown RBP RIP-Chip data0.49□□□□□ -2.33not detected
YCK3YER123W YOR186WQ08560 144 aa0.49□□□□□ -2.33
YCK3YER123W EFG1Q3E705 233 aaKnown RBP0.49□□□□□ -2.33
YCK3YER123W YOR020W-AQ3E824 90 aa0.49□□□□□ -2.33
YCK3YER123W COX2P00410 251 aa0.49□□□□□ -2.33
YCK3YER123W RHO1P06780 209 aaKnown RBP0.49□□□□□ -2.33
YCK3YER123W FCY2P17064 533 aa0.49□□□□□ -2.33
YCK3YER123W YGL010WP25338 174 aa0.49□□□□□ -2.33
YCK3YER123W HOM6P31116 359 aaKnown RBP0.49□□□□□ -2.33
YCK3YER123W FES1P38260 290 aa0.49□□□□□ -2.33
YCK3YER123W SMB1P40018 196 aaKnown RBP0.49□□□□□ -2.33
YCK3YER123W THO1P40040 218 aaKnown RBP0.49□□□□□ -2.33
YCK3YER123W GLE2P40066 365 aa0.49□□□□□ -2.33
YCK3YER123W BNA6P43619 295 aa0.49□□□□□ -2.33
YCK3YER123W HAM1P47119 197 aaKnown RBP0.49□□□□□ -2.33
YCK3YER123W CCC1P47818 322 aa0.49□□□□□ -2.33
YCK3YER123W HOP2P53187 214 aa0.49□□□□□ -2.33
YCK3YER123W YDR249CQ03787 373 aa0.49□□□□□ -2.33
YCK3YER123W COQ10Q08058 207 aa0.49□□□□□ -2.33
YCK3YER123W YCT1Q12235 531 aa0.49□□□□□ -2.33
YCK3YER123W YOR029WQ12243 111 aa0.49□□□□□ -2.33
YCK3YER123W RSR1P13856 272 aa0.48□□□□□ -2.33
YCK3YER123W ANB1P19211 157 aa0.48□□□□□ -2.33
YCK3YER123W SEC14P24280 304 aaKnown RBP0.48□□□□□ -2.33
YCK3YER123W YUH1P35127 236 aa0.48□□□□□ -2.33
YCK3YER123W YPT52P36018 234 aaKnown RBP0.48□□□□□ -2.33
YCK3YER123W OPY1P38271 328 aa0.48□□□□□ -2.33
YCK3YER123W YBR219CP38317 127 aa0.48□□□□□ -2.33
YCK3YER123W BIG1P38813 335 aa0.48□□□□□ -2.33
YCK3YER123W BFR1P38934 470 aaKnown RBP RIP-Chip data0.48□□□□□ -2.33not detected
YCK3YER123W SMD3P43321 101 aaKnown RBP0.48□□□□□ -2.33
YCK3YER123W APS3P47064 194 aa0.48□□□□□ -2.33
YCK3YER123W RTC4P53850 401 aa0.48□□□□□ -2.33
YCK3YER123W NEJ1Q06148 342 aa0.48□□□□□ -2.33
YCK3YER123W YPR172WQ06608 200 aa0.48□□□□□ -2.33
YCK3YER123W SDO1Q07953 250 aaKnown RBP0.48□□□□□ -2.33
YCK3YER123W FIT3Q08907 204 aa0.48□□□□□ -2.33
YCK3YER123W YDR010CQ12426 110 aa0.48□□□□□ -2.33
YCK3YER123W PSF1Q12488 208 aa0.48□□□□□ -2.33
YCK3YER123W GCY1P14065 312 aaKnown RBP RIP-Chip data0.47□□□□□ -2.33not detected
YCK3YER123W SUA7P29055 345 aaPredicted RBP0.47□□□□□ -2.33
YCK3YER123W SRB4P32569 687 aa0.47□□□□□ -2.33
YCK3YER123W VPS51P36116 164 aa0.47□□□□□ -2.33
YCK3YER123W YBR063CP38083 404 aa0.47□□□□□ -2.33
YCK3YER123W GOS1P38736 223 aa0.47□□□□□ -2.33
YCK3YER123W APQ12P40532 138 aa0.47□□□□□ -2.33
YCK3YER123W RPS29AP41057 56 aaKnown RBP0.47□□□□□ -2.33
YCK3YER123W CAT5P41735 233 aa0.47□□□□□ -2.33
YCK3YER123W YAR1P46683 200 aa0.47□□□□□ -2.33
YCK3YER123W YJR056CP47115 236 aa0.47□□□□□ -2.33
YCK3YER123W NUP57P48837 541 aa0.47□□□□□ -2.33
YCK3YER123W NSA1P53136 463 aaPredicted RBP0.47□□□□□ -2.33
YCK3YER123W YGL034CP53186 121 aa0.47□□□□□ -2.33
YCK3YER123W YDR274CP87283 123 aa0.47□□□□□ -2.33
YCK3YER123W ABF2Q02486 183 aa0.47□□□□□ -2.33
YCK3YER123W HEM25Q07534 307 aa0.47□□□□□ -2.33
YCK3YER123W PAM18Q07914 168 aa0.47□□□□□ -2.33
YCK3YER123W RRT8Q08219 342 aa0.47□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 127.4 ms