RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W PIN3Q06449 215 aa3.54□□□□□ -1.84
TPA1YER049W ERG27Q12452 347 aaKnown RBP3.54□□□□□ -1.84
TPA1YER049W YHR214C-EQ8TGK0 99 aa3.54□□□□□ -1.84
TPA1YER049W FAS1P07149 2051 aaKnown RBP3.53□□□□□ -1.84
TPA1YER049W YAL064W-BO13512 126 aa3.53□□□□□ -1.84
TPA1YER049W COX5BP00425 151 aa3.53□□□□□ -1.84
TPA1YER049W ATP5P09457 212 aa3.53□□□□□ -1.84
TPA1YER049W RPL30P14120 105 aaKnown RBP3.53□□□□□ -1.84
TPA1YER049W SPO7P18410 259 aa3.53□□□□□ -1.84
TPA1YER049W PCL1P24867 279 aa3.53□□□□□ -1.84
TPA1YER049W ELO2P25358 347 aa3.53□□□□□ -1.84
TPA1YER049W ERV1P27882 189 aa3.53□□□□□ -1.84
TPA1YER049W SRX1P36077 127 aa3.53□□□□□ -1.84
TPA1YER049W MRPL15P36523 253 aa3.53□□□□□ -1.84
TPA1YER049W NSA2P40078 261 aaKnown RBP3.53□□□□□ -1.84
TPA1YER049W YGR149WP48236 432 aa3.53□□□□□ -1.84
TPA1YER049W RSM23Q01163 450 aa3.53□□□□□ -1.84
TPA1YER049W YVH1Q02256 364 aaKnown RBP3.53□□□□□ -1.84
TPA1YER049W DIG2Q03373 323 aaKnown RBP3.53□□□□□ -1.84
TPA1YER049W RDL2Q08742 149 aaKnown RBP3.53□□□□□ -1.84
TPA1YER049W SME1Q12330 94 aaPredicted RBP3.53□□□□□ -1.84
TPA1YER049W FLO9P39712 1322 aa3.52□□□□□ -1.85
TPA1YER049W ILV5P06168 395 aaKnown RBP3.52□□□□□ -1.85
TPA1YER049W COQ3P27680 312 aa3.52□□□□□ -1.85
TPA1YER049W SHB17P36136 271 aaKnown RBP3.52□□□□□ -1.85
TPA1YER049W YPT10P38146 199 aa3.52□□□□□ -1.85
TPA1YER049W NOP16P40007 231 aaKnown RBP3.52□□□□□ -1.85
TPA1YER049W CCS1P40202 249 aaKnown RBP3.52□□□□□ -1.85
TPA1YER049W ATF1P40353 525 aa3.52□□□□□ -1.85
TPA1YER049W RTS2P40962 232 aa3.52□□□□□ -1.85
TPA1YER049W CUP9P41817 306 aa3.52□□□□□ -1.85
TPA1YER049W SNO3P43544 222 aa3.52□□□□□ -1.85
TPA1YER049W RIB4P50861 169 aaPredicted RBP3.52□□□□□ -1.85
TPA1YER049W LST7P53237 242 aa3.52□□□□□ -1.85
TPA1YER049W PCP1P53259 346 aa3.52□□□□□ -1.85
TPA1YER049W YNR048WP53740 393 aa3.52□□□□□ -1.85
TPA1YER049W ATG21Q02887 496 aa3.52□□□□□ -1.85
TPA1YER049W YDR102CQ03864 110 aa3.52□□□□□ -1.85
TPA1YER049W PAM18Q07914 168 aa3.52□□□□□ -1.85
TPA1YER049W FYV7Q12247 151 aa3.52□□□□□ -1.85
TPA1YER049W PRP46Q12417 451 aaPredicted RBP3.52□□□□□ -1.85
TPA1YER049W YDL085C-AQ3E7B7 68 aaKnown RBP3.52□□□□□ -1.85
TPA1YER049W HUG1Q6Q5K6 68 aa3.52□□□□□ -1.85
TPA1YER049W SPO13P23624 291 aa3.52□□□□□ -1.85
TPA1YER049W CDC39P25655 2108 aaKnown RBP3.52□□□□□ -1.85
TPA1YER049W YUH1P35127 236 aa3.52□□□□□ -1.85
TPA1YER049W PAC2P39937 518 aa3.52□□□□□ -1.85
TPA1YER049W COX15P40086 486 aa3.52□□□□□ -1.85
TPA1YER049W MSY1P48527 492 aa3.52□□□□□ -1.85
TPA1YER049W PDR17P53844 350 aa3.52□□□□□ -1.85
TPA1YER049W YNL092WP53934 400 aa3.52□□□□□ -1.85
TPA1YER049W APS2Q00381 147 aa3.52□□□□□ -1.85
TPA1YER049W YBR255C-AQ3E776 120 aa3.52□□□□□ -1.85
TPA1YER049W QCR9P22289 66 aa3.51□□□□□ -1.85
TPA1YER049W YER010CP40011 234 aa3.51□□□□□ -1.85
TPA1YER049W YGR269WP40326 108 aa3.51□□□□□ -1.85
TPA1YER049W YPL039WQ03080 316 aa3.51□□□□□ -1.85
TPA1YER049W YOR186WQ08560 144 aa3.51□□□□□ -1.85
TPA1YER049W USB1Q12208 290 aaKnown RBP3.51□□□□□ -1.85
TPA1YER049W BRR2P32639 2163 aaKnown RBP3.51□□□□□ -1.85
TPA1YER049W RPS25BP0C0T4 108 aaKnown RBP3.5□□□□□ -1.85
TPA1YER049W PDX1P16451 410 aa3.5□□□□□ -1.85
TPA1YER049W YKL102CP34249 101 aa3.5□□□□□ -1.85
TPA1YER049W MRPL11P36521 249 aaPredicted RBP3.5□□□□□ -1.85
TPA1YER049W SWD3P38123 315 aa3.5□□□□□ -1.85
TPA1YER049W MOH1P38191 138 aa3.5□□□□□ -1.85
TPA1YER049W LOC1P43586 204 aaPredicted RBP3.5□□□□□ -1.85
TPA1YER049W COQ11Q05892 277 aa3.5□□□□□ -1.85
TPA1YER049W RFU1Q08003 200 aa3.5□□□□□ -1.85
TPA1YER049W COX17Q12287 69 aa3.5□□□□□ -1.85
TPA1YER049W RPS25AQ3E792 108 aaPredicted RBP3.5□□□□□ -1.85
TPA1YER049W RPS22AP0C0W1 130 aaKnown RBP3.5□□□□□ -1.85
TPA1YER049W RPL31AP0C2H8 113 aaKnown RBP3.5□□□□□ -1.85
TPA1YER049W RPL31BP0C2H9 113 aaKnown RBP3.5□□□□□ -1.85
TPA1YER049W VMA16P23968 213 aa3.5□□□□□ -1.85
TPA1YER049W YCR006CP25350 157 aa3.5□□□□□ -1.85
TPA1YER049W ACP1P32463 125 aa3.5□□□□□ -1.85
TPA1YER049W YKL075CP36083 450 aa3.5□□□□□ -1.85
TPA1YER049W RTC3P38804 111 aaPredicted RBP3.5□□□□□ -1.85
TPA1YER049W GPI2P46961 280 aa3.5□□□□□ -1.85
TPA1YER049W TTI2P47168 421 aa3.5□□□□□ -1.85
TPA1YER049W PGU1P47180 361 aa3.5□□□□□ -1.85
TPA1YER049W SAE3P89114 91 aa3.5□□□□□ -1.85
TPA1YER049W RCE1Q03530 315 aa3.5□□□□□ -1.85
TPA1YER049W TSA2Q04120 196 aa3.5□□□□□ -1.85
TPA1YER049W YOR292CQ08743 309 aa3.5□□□□□ -1.85
TPA1YER049W POM33Q12164 279 aa3.5□□□□□ -1.85
TPA1YER049W PAA1Q12447 191 aaKnown RBP3.5□□□□□ -1.85
TPA1YER049W YIL046W-AQ3E7Z4 54 aa3.5□□□□□ -1.85
TPA1YER049W YCL001W-BQ96VH2 84 aa3.5□□□□□ -1.85
TPA1YER049W FMP49A0A023PZB3 126 aa3.49□□□□□ -1.85
TPA1YER049W POR1P04840 283 aaKnown RBP3.49□□□□□ -1.85
TPA1YER049W URA5P13298 226 aaKnown RBP3.49□□□□□ -1.85
TPA1YER049W ATG15P25641 520 aa3.49□□□□□ -1.85
TPA1YER049W DEG1P31115 442 aaKnown RBP3.49□□□□□ -1.85
TPA1YER049W YBL059WP34224 193 aa3.49□□□□□ -1.85
TPA1YER049W GAT2P40209 560 aa3.49□□□□□ -1.85
TPA1YER049W TRM9P49957 279 aa3.49□□□□□ -1.85
TPA1YER049W YGR050CP53231 118 aa3.49□□□□□ -1.85
TPA1YER049W DAD3P69850 94 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms