RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	NSP1	P14907	823 aa	Known RBP	1	□□□□□ -2.25
SHE9	YDR393W	PET9	P18239	318 aa	Known RBP	1	□□□□□ -2.25
SHE9	YDR393W	YCR099C	P25657	155 aa		1	□□□□□ -2.25
SHE9	YDR393W	YET1	P35723	206 aa		1	□□□□□ -2.25
SHE9	YDR393W	LDB7	P38210	180 aa		1	□□□□□ -2.25
SHE9	YDR393W	YBR220C	P38318	560 aa		1	□□□□□ -2.25
SHE9	YDR393W	YHL037C	P38733	133 aa		1	□□□□□ -2.25
SHE9	YDR393W	ICE2	P40499	491 aa		1	□□□□□ -2.25
SHE9	YDR393W	YIR020C	P40575	100 aa		1	□□□□□ -2.25
SHE9	YDR393W	TOS8	P53147	276 aa		1	□□□□□ -2.25
SHE9	YDR393W	ERV29	P53337	310 aa		1	□□□□□ -2.25
SHE9	YDR393W	MPA43	P53583	542 aa	Predicted RBP	1	□□□□□ -2.25
SHE9	YDR393W	NUP49	Q02199	472 aa		1	□□□□□ -2.25
SHE9	YDR393W	RIM9	Q04734	239 aa		1	□□□□□ -2.25
SHE9	YDR393W	SML1	Q04964	104 aa		1	□□□□□ -2.25
SHE9	YDR393W	YPR174C	Q06616	221 aa	Predicted RBP	1	□□□□□ -2.25
SHE9	YDR393W	NIP7	Q08962	181 aa	Known RBP	1	□□□□□ -2.25
SHE9	YDR393W	GTT2	Q12390	233 aa		1	□□□□□ -2.25
SHE9	YDR393W	ERD2	P18414	219 aa		0.99	□□□□□ -2.25
SHE9	YDR393W	TAH1	P25638	111 aa	Predicted RBP	0.99	□□□□□ -2.25
SHE9	YDR393W	HSP150	P32478	413 aa		0.99	□□□□□ -2.25
SHE9	YDR393W	SUI1	P32911	108 aa	Known RBP	0.99	□□□□□ -2.25
SHE9	YDR393W	YBR063C	P38083	404 aa		0.99	□□□□□ -2.25
SHE9	YDR393W	ECM33	P38248	429 aa	Known RBP	0.99	□□□□□ -2.25
SHE9	YDR393W	PRS3	P38689	320 aa	Known RBP	0.99	□□□□□ -2.25
SHE9	YDR393W	CAT5	P41735	233 aa		0.99	□□□□□ -2.25
SHE9	YDR393W	HOC1	P47124	396 aa		0.99	□□□□□ -2.25
SHE9	YDR393W	YNL247W	P53852	767 aa	Known RBP	0.99	□□□□□ -2.25
SHE9	YDR393W	SEI1	Q06058	285 aa		0.99	□□□□□ -2.25
SHE9	YDR393W	RTR2	Q12378	196 aa		0.99	□□□□□ -2.25
SHE9	YDR393W	YOR032W-A	Q8TGS1	66 aa		0.99	□□□□□ -2.25
SHE9	YDR393W	FLO9	P39712	1322 aa		0.99	□□□□□ -2.25
SHE9	YDR393W	SLH1	P53327	1967 aa	Known RBP	0.99	□□□□□ -2.25
SHE9	YDR393W	CDC8	P00572	216 aa		0.98	□□□□□ -2.25
SHE9	YDR393W	YSF3	P0C074	85 aa	Predicted RBP	0.98	□□□□□ -2.25
SHE9	YDR393W	RSR1	P13856	272 aa		0.98	□□□□□ -2.25
SHE9	YDR393W	TRX3	P25372	127 aa		0.98	□□□□□ -2.25
SHE9	YDR393W	RPS5	P26783	225 aa	Known RBP	0.98	□□□□□ -2.25
SHE9	YDR393W	ADE1	P27616	306 aa		0.98	□□□□□ -2.25
SHE9	YDR393W	RPA43	P46669	326 aa		0.98	□□□□□ -2.25
SHE9	YDR393W	MRPL50	P53724	139 aa		0.98	□□□□□ -2.25
SHE9	YDR393W	ABF2	Q02486	183 aa		0.98	□□□□□ -2.25
SHE9	YDR393W	VPS71	Q03433	280 aa		0.98	□□□□□ -2.25
SHE9	YDR393W	MSH5	Q12175	901 aa		0.98	□□□□□ -2.25
SHE9	YDR393W	CDC36	P06100	191 aa	Predicted RBP	0.97	□□□□□ -2.25
SHE9	YDR393W	RPL2A	P0CX45	254 aa	Known RBP	0.97	□□□□□ -2.25
SHE9	YDR393W	RPL2B	P0CX46	254 aa	Known RBP	0.97	□□□□□ -2.25
SHE9	YDR393W	YKL075C	P36083	450 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	AST2	P39945	430 aa	Known RBP	0.97	□□□□□ -2.25
SHE9	YDR393W	GLE2	P40066	365 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	RPL13B	P40212	199 aa	Known RBP	0.97	□□□□□ -2.25
SHE9	YDR393W	PRE6	P40303	254 aa	Known RBP	0.97	□□□□□ -2.25
SHE9	YDR393W	SOK1	P40317	901 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	APQ12	P40532	138 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	TIR3	P40552	269 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	RPL33B	P41056	107 aa	Known RBP	0.97	□□□□□ -2.25
SHE9	YDR393W	YJR149W	P47177	404 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	YLR162W	Q06235	118 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	YPR202W	Q08993	238 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	YOR029W	Q12243	111 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	YLR126C	Q12288	251 aa		0.97	□□□□□ -2.25
SHE9	YDR393W	RPL13A	Q12690	199 aa	Predicted RBP	0.97	□□□□□ -2.25
SHE9	YDR393W	YHR214C-D	P0CX93	97 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	RIB7	P33312	244 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	MAK5	P38112	773 aa	Predicted RBP	0.96	□□□□□ -2.26
SHE9	YDR393W	ALB1	P47019	175 aa	Predicted RBP	0.96	□□□□□ -2.26
SHE9	YDR393W	SBH2	P52871	88 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	LSM3	P57743	89 aa	Known RBP	0.96	□□□□□ -2.26
SHE9	YDR393W	PET117	Q02771	107 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	YMD8	Q03697	442 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	YML108W	Q03759	105 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	KRE28	Q04431	385 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	RAF1	Q06891	181 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	YLR036C	Q07986	203 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	UIP4	Q08926	304 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	SEC14	P24280	304 aa	Known RBP	0.96	□□□□□ -2.26
SHE9	YDR393W	RAD51	P25454	400 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	PTM1	P32857	523 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	YKT6	P36015	200 aa	Known RBP	0.96	□□□□□ -2.26
SHE9	YDR393W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
SHE9	YDR393W	RIB1	P38066	345 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	FES1	P38260	290 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	PGD1	P40356	397 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	RAD17	P48581	401 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	GPI8	P49018	411 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	SED1	Q01589	338 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	PAM18	Q07914	168 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	YGR035W-A	Q45U48	73 aa		0.96	□□□□□ -2.26
SHE9	YDR393W	YUH1	P35127	236 aa		0.95	□□□□□ -2.26
SHE9	YDR393W	UPS2	P35200	230 aa		0.95	□□□□□ -2.26
SHE9	YDR393W	YER121W	P40076	114 aa		0.95	□□□□□ -2.26
SHE9	YDR393W	YNL217W	P40152	326 aa		0.95	□□□□□ -2.26
SHE9	YDR393W	BNA6	P43619	295 aa		0.95	□□□□□ -2.26
SHE9	YDR393W	ADO1	P47143	340 aa	Known RBP	0.95	□□□□□ -2.26
SHE9	YDR393W	YLR460C	P54007	376 aa		0.95	□□□□□ -2.26
SHE9	YDR393W	RIO1	Q12196	484 aa	Known RBP	0.95	□□□□□ -2.26
SHE9	YDR393W	PSF1	Q12488	208 aa		0.95	□□□□□ -2.26
SHE9	YDR393W	DDP1	Q99321	188 aa	Known RBP	0.95	□□□□□ -2.26
SHE9	YDR393W	RPL35A	P0CX84	120 aa	Known RBP	0.94	□□□□□ -2.26
SHE9	YDR393W	RPL35B	P0CX85	120 aa	Known RBP	0.94	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 90.1 ms