RNA–Protein interactions for RNA: YDL172C

YDL172C, Transcript of Dubious open reading frame, yeastyeast

Gene YDL172C, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL172CYDL172C SHE2P36068 246 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
YDL172CYDL172C SSZ1P38788 538 aaKnown RBP4.2□□□□□ -1.74
YDL172CYDL172C NVJ1P38881 321 aa4.2□□□□□ -1.74
YDL172CYDL172C MST28P39552 234 aa4.2□□□□□ -1.74
YDL172CYDL172C IRC18P47056 224 aa4.2□□□□□ -1.74
YDL172CYDL172C DOC1P53068 250 aa4.2□□□□□ -1.74
YDL172CYDL172C MST27P53176 234 aa4.2□□□□□ -1.74
YDL172CYDL172C AGC1Q12482 902 aa4.2□□□□□ -1.74
YDL172CYDL172C BOL1Q3E793 110 aa4.2□□□□□ -1.74
YDL172CYDL172C URA3P03962 267 aa4.19□□□□□ -1.74
YDL172CYDL172C CYC3P06182 269 aa4.19□□□□□ -1.74
YDL172CYDL172C MDH1P17505 334 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
YDL172CYDL172C FAR1P21268 830 aa4.19□□□□□ -1.74
YDL172CYDL172C AGA2P32781 87 aa4.19□□□□□ -1.74
YDL172CYDL172C AST1P35183 429 aa4.19□□□□□ -1.74
YDL172CYDL172C ATP3P38077 311 aaKnown RBP4.19□□□□□ -1.74
YDL172CYDL172C DOG2P38773 246 aa4.19□□□□□ -1.74
YDL172CYDL172C DOG1P38774 246 aa4.19□□□□□ -1.74
YDL172CYDL172C SNL1P40548 159 aa4.19□□□□□ -1.74
YDL172CYDL172C ARO8P53090 500 aaKnown RBP4.19□□□□□ -1.74
YDL172CYDL172C SGF11Q03067 99 aa4.19□□□□□ -1.74
YDL172CYDL172C RAD28Q12021 506 aa4.19□□□□□ -1.74
YDL172CYDL172C ODC2Q99297 307 aa4.19□□□□□ -1.74
YDL172CYDL172C URA6P15700 204 aa4.18□□□□□ -1.74
YDL172CYDL172C SIP1P32578 815 aa4.18□□□□□ -1.74
YDL172CYDL172C POP2P39008 433 aa4.18□□□□□ -1.74
YDL172CYDL172C SSU72P53538 206 aaPredicted RBP4.18□□□□□ -1.74
YDL172CYDL172C OCA2P53949 197 aa4.18□□□□□ -1.74
YDL172CYDL172C NRG1Q03125 231 aa4.18□□□□□ -1.74
YDL172CYDL172C FMP42Q04991 504 aa4.18□□□□□ -1.74
YDL172CYDL172C SOD1P00445 154 aaKnown RBP4.17□□□□□ -1.74
YDL172CYDL172C VMA22P38784 181 aa4.17□□□□□ -1.74
YDL172CYDL172C YAR068WP39564 161 aa4.17□□□□□ -1.74
YDL172CYDL172C PDS1P40316 373 aaPredicted RBP4.17□□□□□ -1.74
YDL172CYDL172C POR2P40478 281 aa4.17□□□□□ -1.74
YDL172CYDL172C MCM21Q06675 368 aa4.17□□□□□ -1.74
YDL172CYDL172C VAM10Q08474 114 aa4.17□□□□□ -1.74
YDL172CYDL172C YGK3Q12222 375 aaPredicted RBP4.17□□□□□ -1.74
YDL172CYDL172C HUG1Q6Q5K6 68 aa4.17□□□□□ -1.74
YDL172CYDL172C FMP33P46998 180 aa4.16□□□□□ -1.74
YDL172CYDL172C RPA34P47006 233 aaPredicted RBP4.16□□□□□ -1.74
YDL172CYDL172C YPR195CQ06594 109 aa4.16□□□□□ -1.74
YDL172CYDL172C TIR4Q12218 487 aaPredicted RBP4.16□□□□□ -1.74
YDL172CYDL172C MED4Q12343 284 aa4.16□□□□□ -1.74
YDL172CYDL172C YEL009C-AA0A023PZF2 135 aa4.15□□□□□ -1.75
YDL172CYDL172C SEN2P16658 377 aa4.15□□□□□ -1.75
YDL172CYDL172C MIR1P23641 311 aaKnown RBP4.15□□□□□ -1.75
YDL172CYDL172C RRT1P38192 103 aa4.15□□□□□ -1.75
YDL172CYDL172C CDS1P38221 457 aa4.15□□□□□ -1.75
YDL172CYDL172C SNF11P38956 169 aa4.15□□□□□ -1.75
YDL172CYDL172C YNL200CP40165 246 aaKnown RBP4.15□□□□□ -1.75
YDL172CYDL172C AIM20P40451 204 aa4.15□□□□□ -1.75
YDL172CYDL172C YIL060WP40519 144 aa4.15□□□□□ -1.75
YDL172CYDL172C BNA6P43619 295 aa4.15□□□□□ -1.75
YDL172CYDL172C MEH1Q02205 184 aa4.15□□□□□ -1.75
YDL172CYDL172C YMR130WQ04223 302 aa4.15□□□□□ -1.75
YDL172CYDL172C TIM18Q08749 192 aa4.15□□□□□ -1.75
YDL172CYDL172C ATG31Q12421 196 aa4.15□□□□□ -1.75
YDL172CYDL172C YOR011W-AQ3E807 68 aa4.15□□□□□ -1.75
YDL172CYDL172C CHO1P08456 276 aa4.14□□□□□ -1.75
YDL172CYDL172C PMR1P13586 950 aa4.14□□□□□ -1.75
YDL172CYDL172C VMA8P32610 256 aaKnown RBP4.14□□□□□ -1.75
YDL172CYDL172C RIB7P33312 244 aa4.14□□□□□ -1.75
YDL172CYDL172C EGD2P38879 174 aaKnown RBP4.14□□□□□ -1.75
YDL172CYDL172C SNX4P47057 423 aa4.14□□□□□ -1.75
YDL172CYDL172C YGR042WP53227 271 aa4.14□□□□□ -1.75
YDL172CYDL172C VBA1Q04301 562 aa4.14□□□□□ -1.75
YDL172CYDL172C RTT103Q05543 409 aa4.14□□□□□ -1.75
YDL172CYDL172C FEX1Q08913 375 aa4.14□□□□□ -1.75
YDL172CYDL172C FEX2Q08991 375 aa4.14□□□□□ -1.75
YDL172CYDL172C TRM10Q12400 293 aa4.14□□□□□ -1.75
YDL172CYDL172C YLR415CO13578 112 aa4.13□□□□□ -1.75
YDL172CYDL172C HIS3P06633 220 aa4.13□□□□□ -1.75
YDL172CYDL172C YJL197C-AP0C5P0 93 aa4.13□□□□□ -1.75
YDL172CYDL172C MSS2P40990 351 aa4.13□□□□□ -1.75
YDL172CYDL172C VHT1P53241 593 aa4.13□□□□□ -1.75
YDL172CYDL172C POS5Q06892 414 aa4.13□□□□□ -1.75
YDL172CYDL172C IZH3Q07959 543 aa4.13□□□□□ -1.75
YDL172CYDL172C LDS2Q08218 356 aa4.13□□□□□ -1.75
YDL172CYDL172C UBA3Q99344 299 aa4.13□□□□□ -1.75
YDL172CYDL172C RPS18AP0CX55 146 aaKnown RBP4.12□□□□□ -1.75
YDL172CYDL172C RPS18BP0CX56 146 aaPredicted RBP4.12□□□□□ -1.75
YDL172CYDL172C ANB1P19211 157 aa4.12□□□□□ -1.75
YDL172CYDL172C YCR001WP25347 104 aa4.12□□□□□ -1.75
YDL172CYDL172C MSS1P32559 526 aaPredicted RBP4.12□□□□□ -1.75
YDL172CYDL172C CIN4P39110 191 aa4.12□□□□□ -1.75
YDL172CYDL172C SNU13P39990 126 aaKnown RBP4.12□□□□□ -1.75
YDL172CYDL172C RTT105P40063 208 aa4.12□□□□□ -1.75
YDL172CYDL172C YAE1P47118 141 aaPredicted RBP4.12□□□□□ -1.75
YDL172CYDL172C ENV7Q12003 364 aa4.12□□□□□ -1.75
YDL172CYDL172C YGL258W-AQ3E740 77 aa4.12□□□□□ -1.75
YDL172CYDL172C ZRC1P20107 442 aa4.11□□□□□ -1.75
YDL172CYDL172C TRR1P29509 319 aaKnown RBP4.11□□□□□ -1.75
YDL172CYDL172C MIG3P39943 394 aa4.11□□□□□ -1.75
YDL172CYDL172C RTS2P40962 232 aa4.11□□□□□ -1.75
YDL172CYDL172C GPI2P46961 280 aa4.11□□□□□ -1.75
YDL172CYDL172C YIP3P53633 176 aa4.11□□□□□ -1.75
YDL172CYDL172C YML018CQ03730 393 aa4.11□□□□□ -1.75
YDL172CYDL172C YMR244WQ04018 355 aa4.11□□□□□ -1.75
YDL172CYDL172C GPN3Q06543 272 aa4.11□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms