RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C YLR111WQ12528 110 aa3.94□□□□□ -1.78
CDC48YDL126C YDR034W-BQ6Q5X2 51 aa3.94□□□□□ -1.78
CDC48YDL126C NAG1Q8TGN9 163 aa3.94□□□□□ -1.78
CDC48YDL126C CCH1P50077 2039 aa3.94□□□□□ -1.78
CDC48YDL126C AQY1P0CD91 305 aa3.94□□□□□ -1.78
CDC48YDL126C SFC1P33303 322 aa3.94□□□□□ -1.78
CDC48YDL126C OXA1P39952 402 aa3.94□□□□□ -1.78
CDC48YDL126C RRG9P40156 214 aa3.94□□□□□ -1.78
CDC48YDL126C CAT5P41735 233 aa3.94□□□□□ -1.78
CDC48YDL126C SDT1P53078 280 aa3.94□□□□□ -1.78
CDC48YDL126C IGO1P53897 168 aa3.94□□□□□ -1.78
CDC48YDL126C YVH1Q02256 364 aaKnown RBP3.94□□□□□ -1.78
CDC48YDL126C TIM9O74700 87 aa3.93□□□□□ -1.78
CDC48YDL126C CYC3P06182 269 aa3.93□□□□□ -1.78
CDC48YDL126C TFS1P14306 219 aa3.93□□□□□ -1.78
CDC48YDL126C SCL1P21243 252 aaKnown RBP3.93□□□□□ -1.78
CDC48YDL126C PUT3P25502 979 aaPredicted RBP3.93□□□□□ -1.78
CDC48YDL126C OCH1P31755 480 aa3.93□□□□□ -1.78
CDC48YDL126C WSC4P38739 605 aa3.93□□□□□ -1.78
CDC48YDL126C GCV3P39726 170 aaPredicted RBP3.93□□□□□ -1.78
CDC48YDL126C SHO1P40073 367 aa3.93□□□□□ -1.78
CDC48YDL126C APQ12P40532 138 aa3.93□□□□□ -1.78
CDC48YDL126C AZF1P41696 914 aa3.93□□□□□ -1.78
CDC48YDL126C IKS1P47042 667 aa3.93□□□□□ -1.78
CDC48YDL126C ERG26P53199 349 aaKnown RBP3.93□□□□□ -1.78
CDC48YDL126C SAY1P53324 424 aa3.93□□□□□ -1.78
CDC48YDL126C FMP41P53889 259 aaKnown RBP3.93□□□□□ -1.78
CDC48YDL126C YPL067CQ02754 198 aa3.93□□□□□ -1.78
CDC48YDL126C HEM25Q07534 307 aa3.93□□□□□ -1.78
CDC48YDL126C PFA4Q12006 378 aa3.93□□□□□ -1.78
CDC48YDL126C FCF2Q12035 217 aaPredicted RBP3.93□□□□□ -1.78
CDC48YDL126C FCY22Q12119 530 aa3.93□□□□□ -1.78
CDC48YDL126C SIA1Q12212 622 aa3.93□□□□□ -1.78
CDC48YDL126C YCT1Q12235 531 aa3.93□□□□□ -1.78
CDC48YDL126C MSB2P32334 1306 aa3.93□□□□□ -1.78
CDC48YDL126C ADK1P07170 222 aaKnown RBP3.93□□□□□ -1.78
CDC48YDL126C SEC4P07560 215 aaKnown RBP3.93□□□□□ -1.78
CDC48YDL126C YPR170W-BP0C5R9 85 aa3.93□□□□□ -1.78
CDC48YDL126C NUP1P20676 1076 aa3.93□□□□□ -1.78
CDC48YDL126C SFK1P35735 353 aa3.93□□□□□ -1.78
CDC48YDL126C MTC4P38335 694 aaKnown RBP3.93□□□□□ -1.78
CDC48YDL126C CUE1P38428 203 aa3.93□□□□□ -1.78
CDC48YDL126C ASP1P38986 381 aaPredicted RBP3.93□□□□□ -1.78
CDC48YDL126C MET30P39014 640 aa3.93□□□□□ -1.78
CDC48YDL126C SPC25P40014 221 aa3.93□□□□□ -1.78
CDC48YDL126C TSA2Q04120 196 aa3.93□□□□□ -1.78
CDC48YDL126C GEP5Q12393 293 aa3.93□□□□□ -1.78
CDC48YDL126C YLL053CP0CD98 152 aa3.92□□□□□ -1.78
CDC48YDL126C YCR023CP25351 611 aa3.92□□□□□ -1.78
CDC48YDL126C MRPS9P38120 278 aa3.92□□□□□ -1.78
CDC48YDL126C TRM7P38238 310 aaKnown RBP3.92□□□□□ -1.78
CDC48YDL126C MDM31P38880 579 aa3.92□□□□□ -1.78
CDC48YDL126C HSP10P38910 106 aa3.92□□□□□ -1.78
CDC48YDL126C RPA43P46669 326 aa3.92□□□□□ -1.78
CDC48YDL126C ALG13P53178 202 aa3.92□□□□□ -1.78
CDC48YDL126C AVO2Q04749 426 aa3.92□□□□□ -1.78
CDC48YDL126C ADH6Q04894 360 aaKnown RBP3.92□□□□□ -1.78
CDC48YDL126C MRX8Q05473 314 aa3.92□□□□□ -1.78
CDC48YDL126C YDL218WQ07629 317 aa3.92□□□□□ -1.78
CDC48YDL126C MCH4Q08268 501 aa3.92□□□□□ -1.78
CDC48YDL126C UTP23Q12339 254 aaKnown RBP3.92□□□□□ -1.78
CDC48YDL126C YNR034W-AQ3E841 98 aa3.92□□□□□ -1.78
CDC48YDL126C YPR014CQ6B0W2 109 aa3.92□□□□□ -1.78
CDC48YDL126C SEC22P22214 214 aa3.92□□□□□ -1.78
CDC48YDL126C MRPL28P36527 147 aa3.92□□□□□ -1.78
CDC48YDL126C MPM1P40364 252 aa3.92□□□□□ -1.78
CDC48YDL126C HMS2P47175 358 aa3.92□□□□□ -1.78
CDC48YDL126C MAK3Q03503 176 aa3.92□□□□□ -1.78
CDC48YDL126C HUT1Q12520 339 aa3.92□□□□□ -1.78
CDC48YDL126C TAO3P40468 2376 aa3.91□□□□□ -1.78
CDC48YDL126C DPM1P14020 267 aaKnown RBP3.91□□□□□ -1.78
CDC48YDL126C RPB3P16370 318 aaKnown RBP3.91□□□□□ -1.78
CDC48YDL126C FMT1P32785 401 aa3.91□□□□□ -1.78
CDC48YDL126C PPZ2P33329 710 aa3.91□□□□□ -1.78
CDC48YDL126C IRC22P40006 225 aa3.91□□□□□ -1.78
CDC48YDL126C TOS8P53147 276 aa3.91□□□□□ -1.78
CDC48YDL126C SCW10Q04951 389 aa3.91□□□□□ -1.78
CDC48YDL126C YPR145C-AQ2V2P0 78 aa3.91□□□□□ -1.78
CDC48YDL126C PAI3P01094 68 aa3.91□□□□□ -1.78
CDC48YDL126C STE7P06784 515 aa3.91□□□□□ -1.78
CDC48YDL126C YOR062CP36025 268 aa3.91□□□□□ -1.78
CDC48YDL126C DOG2P38773 246 aa3.91□□□□□ -1.78
CDC48YDL126C FYV4P38783 130 aaPredicted RBP3.91□□□□□ -1.78
CDC48YDL126C COX15P40086 486 aa3.91□□□□□ -1.78
CDC48YDL126C FLX1P40464 311 aa3.91□□□□□ -1.78
CDC48YDL126C LYS12P40495 371 aaKnown RBP3.91□□□□□ -1.78
CDC48YDL126C SNM1P40993 198 aa3.91□□□□□ -1.78
CDC48YDL126C RCE1Q03530 315 aa3.91□□□□□ -1.78
CDC48YDL126C BER1Q06688 274 aaKnown RBP3.91□□□□□ -1.78
CDC48YDL126C DET1Q99288 334 aaKnown RBP3.91□□□□□ -1.78
CDC48YDL126C SLH1P53327 1967 aaKnown RBP3.91□□□□□ -1.78
CDC48YDL126C SNC2P33328 115 aa3.9□□□□□ -1.78
CDC48YDL126C KTI12P34253 313 aaKnown RBP3.9□□□□□ -1.78
CDC48YDL126C SRY1P36007 326 aa3.9□□□□□ -1.78
CDC48YDL126C SPO73P40031 143 aa3.9□□□□□ -1.78
CDC48YDL126C YIL060WP40519 144 aa3.9□□□□□ -1.78
CDC48YDL126C VMA21P41806 77 aa3.9□□□□□ -1.78
CDC48YDL126C CDH1P53197 566 aa3.9□□□□□ -1.78
CDC48YDL126C AAH1P53909 347 aa3.9□□□□□ -1.78
CDC48YDL126C APJ1P53940 528 aa3.9□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms