RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C THI74Q04083 370 aa3.33□□□□□ -1.88
PRP11YDL043C GPI11Q06636 219 aa3.33□□□□□ -1.88
PRP11YDL043C SWC7Q06707 132 aa3.33□□□□□ -1.88
PRP11YDL043C RDL2Q08742 149 aaKnown RBP3.33□□□□□ -1.88
PRP11YDL043C MCP1Q12106 302 aa3.33□□□□□ -1.88
PRP11YDL043C ERV2Q12284 196 aa3.33□□□□□ -1.88
PRP11YDL043C MHT1Q12525 324 aa3.33□□□□□ -1.88
PRP11YDL043C KTI11Q3E840 82 aa3.33□□□□□ -1.88
PRP11YDL043C RPB3P16370 318 aaKnown RBP3.32□□□□□ -1.88
PRP11YDL043C YCR102CP25608 368 aa3.32□□□□□ -1.88
PRP11YDL043C YKL187CP34231 750 aa3.32□□□□□ -1.88
PRP11YDL043C MRPL28P36527 147 aa3.32□□□□□ -1.88
PRP11YDL043C YBR090CP38253 122 aa3.32□□□□□ -1.88
PRP11YDL043C MDM31P38880 579 aa3.32□□□□□ -1.88
PRP11YDL043C YEA4P40004 342 aa3.32□□□□□ -1.88
PRP11YDL043C MRPL49P40858 161 aaPredicted RBP3.32□□□□□ -1.88
PRP11YDL043C YFR045WP43617 309 aa3.32□□□□□ -1.88
PRP11YDL043C SCS3P53012 380 aa3.32□□□□□ -1.88
PRP11YDL043C SYF2P53277 215 aaPredicted RBP3.32□□□□□ -1.88
PRP11YDL043C RCE1Q03530 315 aa3.32□□□□□ -1.88
PRP11YDL043C UTP15Q04305 513 aaKnown RBP3.32□□□□□ -1.88
PRP11YDL043C SEC13Q04491 297 aaKnown RBP3.32□□□□□ -1.88
PRP11YDL043C HRI1Q05905 244 aaKnown RBP3.32□□□□□ -1.88
PRP11YDL043C FRE8Q12209 686 aa3.32□□□□□ -1.88
PRP11YDL043C PRR2Q12310 699 aa3.32□□□□□ -1.88
PRP11YDL043C ATG5Q12380 294 aa3.32□□□□□ -1.88
PRP11YDL043C HUT1Q12520 339 aa3.32□□□□□ -1.88
PRP11YDL043C SNQ2P32568 1501 aaKnown RBP3.32□□□□□ -1.88
PRP11YDL043C ARO1P08566 1588 aaKnown RBP3.32□□□□□ -1.88
PRP11YDL043C BPT1P14772 1559 aa3.32□□□□□ -1.88
PRP11YDL043C ATG2P53855 1592 aa3.32□□□□□ -1.88
PRP11YDL043C ESC1Q03661 1658 aaKnown RBP3.31□□□□□ -1.88
PRP11YDL043C FMP49A0A023PZB3 126 aa3.31□□□□□ -1.88
PRP11YDL043C YEL009C-AA0A023PZF2 135 aa3.31□□□□□ -1.88
PRP11YDL043C YER039C-AP0CD97 72 aa3.31□□□□□ -1.88
PRP11YDL043C TAH1P25638 111 aaPredicted RBP3.31□□□□□ -1.88
PRP11YDL043C ATG15P25641 520 aa3.31□□□□□ -1.88
PRP11YDL043C ACB1P31787 87 aa3.31□□□□□ -1.88
PRP11YDL043C EMP24P32803 203 aaKnown RBP3.31□□□□□ -1.88
PRP11YDL043C YBR241CP38142 488 aa3.31□□□□□ -1.88
PRP11YDL043C POP8P38208 133 aa3.31□□□□□ -1.88
PRP11YDL043C YHL049CP38722 271 aa3.31□□□□□ -1.88
PRP11YDL043C NDT80P38830 627 aa3.31□□□□□ -1.88
PRP11YDL043C PRE5P40302 234 aaKnown RBP3.31□□□□□ -1.88
PRP11YDL043C DLS1P40366 167 aa3.31□□□□□ -1.88
PRP11YDL043C YJL213WP40896 331 aa3.31□□□□□ -1.88
PRP11YDL043C TAD2P47058 250 aa3.31□□□□□ -1.88
PRP11YDL043C COQ5P49017 307 aa3.31□□□□□ -1.88
PRP11YDL043C SBH1P52870 82 aa3.31□□□□□ -1.88
PRP11YDL043C SAY1P53324 424 aa3.31□□□□□ -1.88
PRP11YDL043C MSO1P53604 210 aaKnown RBP3.31□□□□□ -1.88
PRP11YDL043C WSC2P53832 503 aa3.31□□□□□ -1.88
PRP11YDL043C HSK3P69852 69 aa3.31□□□□□ -1.88
PRP11YDL043C SDC1Q03323 175 aa3.31□□□□□ -1.88
PRP11YDL043C GAT3Q07928 141 aa3.31□□□□□ -1.88
PRP11YDL043C CSI2Q08054 341 aa3.31□□□□□ -1.88
PRP11YDL043C MMT2Q08970 484 aa3.31□□□□□ -1.88
PRP11YDL043C YGK3Q12222 375 aaPredicted RBP3.31□□□□□ -1.88
PRP11YDL043C ERP3Q12403 225 aa3.31□□□□□ -1.88
PRP11YDL043C YIL134C-AQ45U18 67 aa3.31□□□□□ -1.88
PRP11YDL043C MED11Q99278 115 aa3.31□□□□□ -1.88
PRP11YDL043C ADH3P07246 375 aaKnown RBP3.3□□□□□ -1.88
PRP11YDL043C SHB17P36136 271 aaKnown RBP3.3□□□□□ -1.88
PRP11YDL043C ECM14P38836 430 aa3.3□□□□□ -1.88
PRP11YDL043C RPB11P38902 120 aa3.3□□□□□ -1.88
PRP11YDL043C COX14P39103 70 aa3.3□□□□□ -1.88
PRP11YDL043C HMF1P40037 129 aaKnown RBP3.3□□□□□ -1.88
PRP11YDL043C ATG18P43601 500 aa3.3□□□□□ -1.88
PRP11YDL043C KEG1P43614 200 aa3.3□□□□□ -1.88
PRP11YDL043C YNL095CP53932 642 aa3.3□□□□□ -1.88
PRP11YDL043C YLR152CP54072 576 aa3.3□□□□□ -1.88
PRP11YDL043C YDR209CQ03480 137 aa3.3□□□□□ -1.88
PRP11YDL043C GRH1Q04410 372 aaKnown RBP3.3□□□□□ -1.88
PRP11YDL043C ARC18Q05933 178 aaKnown RBP3.3□□□□□ -1.88
PRP11YDL043C YLR042CQ07990 161 aa3.3□□□□□ -1.88
PRP11YDL043C YOR376WQ08900 122 aa3.3□□□□□ -1.88
PRP11YDL043C PEX11Q12462 236 aa3.3□□□□□ -1.88
PRP11YDL043C STE7P06784 515 aa3.29□□□□□ -1.88
PRP11YDL043C SNF4P12904 322 aa3.29□□□□□ -1.88
PRP11YDL043C ARF2P19146 181 aaKnown RBP3.29□□□□□ -1.88
PRP11YDL043C OAC1P32332 324 aa3.29□□□□□ -1.88
PRP11YDL043C CLB6P32943 380 aa3.29□□□□□ -1.88
PRP11YDL043C SFK1P35735 353 aa3.29□□□□□ -1.88
PRP11YDL043C PDX3P38075 228 aaKnown RBP3.29□□□□□ -1.88
PRP11YDL043C ATG8P38182 117 aaRIP-Chip data3.29□□□□□ -1.88not detected
PRP11YDL043C ECM33P38248 429 aaKnown RBP3.29□□□□□ -1.88
PRP11YDL043C PEX22P39718 180 aa3.29□□□□□ -1.88
PRP11YDL043C APQ12P40532 138 aa3.29□□□□□ -1.88
PRP11YDL043C SYS1P41544 203 aa3.29□□□□□ -1.88
PRP11YDL043C OST2P46964 130 aa3.29□□□□□ -1.88
PRP11YDL043C YGL230CP53074 147 aa3.29□□□□□ -1.88
PRP11YDL043C ALG13P53178 202 aa3.29□□□□□ -1.88
PRP11YDL043C PDR17P53844 350 aa3.29□□□□□ -1.88
PRP11YDL043C INP1Q03694 420 aa3.29□□□□□ -1.88
PRP11YDL043C UPS1Q05776 175 aa3.29□□□□□ -1.88
PRP11YDL043C YOL024WQ08172 172 aa3.29□□□□□ -1.88
PRP11YDL043C YOL131WQ08270 108 aa3.29□□□□□ -1.88
PRP11YDL043C MCT1Q12283 360 aa3.29□□□□□ -1.88
PRP11YDL043C YLR126CQ12288 251 aa3.29□□□□□ -1.88
PRP11YDL043C SUS1Q6WNK7 96 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms