RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	MRPL49	P40858	161 aa	Predicted RBP	3.05	□□□□□ -1.92
RTK1	YDL025C	YFH7	P43591	353 aa		3.05	□□□□□ -1.92
RTK1	YDL025C	GON7	P46984	123 aa		3.05	□□□□□ -1.92
RTK1	YDL025C	YGR050C	P53231	118 aa		3.05	□□□□□ -1.92
RTK1	YDL025C	RSM10	Q03201	203 aa		3.05	□□□□□ -1.92
RTK1	YDL025C	DUR1,2	P32528	1835 aa	Known RBP	3.05	□□□□□ -1.92
RTK1	YDL025C	SOD1	P00445	154 aa	Known RBP	3.05	□□□□□ -1.92
RTK1	YDL025C	SIR2	P06700	562 aa		3.05	□□□□□ -1.92
RTK1	YDL025C	FES1	P38260	290 aa		3.05	□□□□□ -1.92
RTK1	YDL025C	HMF1	P40037	129 aa	Known RBP	3.05	□□□□□ -1.92
RTK1	YDL025C	YKE4	P40544	346 aa		3.05	□□□□□ -1.92
RTK1	YDL025C	ATG22	P25568	528 aa		3.04	□□□□□ -1.92
RTK1	YDL025C	AME1	P38313	324 aa		3.04	□□□□□ -1.92
RTK1	YDL025C	YHR125W	P38831	101 aa		3.03	□□□□□ -1.92
RTK1	YDL025C	MOB1	P40484	314 aa		3.03	□□□□□ -1.92
RTK1	YDL025C	ARC15	P40518	154 aa	RIP-Chip data	3.03	□□□□□ -1.92	not detected
RTK1	YDL025C	BUD13	P46947	266 aa	Predicted RBP	3.03	□□□□□ -1.92
RTK1	YDL025C	YNL184C	P53876	108 aa		3.03	□□□□□ -1.92
RTK1	YDL025C	COG5	P53951	403 aa		3.03	□□□□□ -1.92
RTK1	YDL025C	GGA1	Q06336	557 aa		3.03	□□□□□ -1.92
RTK1	YDL025C	SKG1	P36169	355 aa		3.03	□□□□□ -1.93
RTK1	YDL025C	TVP23	P38962	199 aa		3.03	□□□□□ -1.93
RTK1	YDL025C	YNL010W	P53981	241 aa	Known RBP	3.03	□□□□□ -1.93
RTK1	YDL025C	BRX1	Q08235	291 aa	Known RBP	3.03	□□□□□ -1.93
RTK1	YDL025C	YPL162C	Q12042	273 aa		3.03	□□□□□ -1.93
RTK1	YDL025C	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.03	□□□□□ -1.93
RTK1	YDL025C	MAG1	P22134	296 aa	Known RBP	3.02	□□□□□ -1.93
RTK1	YDL025C	MGT1	P26188	188 aa		3.02	□□□□□ -1.93
RTK1	YDL025C	YKR041W	P36134	250 aa		3.02	□□□□□ -1.93
RTK1	YDL025C	POP4	P38336	279 aa		3.02	□□□□□ -1.93
RTK1	YDL025C	YER076C	P40049	302 aa		3.02	□□□□□ -1.93
RTK1	YDL025C	YFR032C-B	Q8TGU2	87 aa		3.02	□□□□□ -1.93
RTK1	YDL025C	Q0255	P03881	472 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	RPS23A	P0CX29	145 aa	Known RBP	3.01	□□□□□ -1.93
RTK1	YDL025C	RPS23B	P0CX30	145 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	UBC6	P33296	250 aa	Predicted RBP	3.01	□□□□□ -1.93
RTK1	YDL025C	GLE2	P40066	365 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	YNL247W	P53852	767 aa	Known RBP	3.01	□□□□□ -1.93
RTK1	YDL025C	YMR315W	Q04869	349 aa	Known RBP	3.01	□□□□□ -1.93
RTK1	YDL025C	YOR283W	Q12040	230 aa	Known RBP	3.01	□□□□□ -1.93
RTK1	YDL025C	SAS5	Q99314	248 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	YLR422W	Q06409	1932 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	YLR156W	P0CE96	114 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	YLR159W	P0CE97	114 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	YLR161W	P0CE98	114 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	VMA11	P32842	164 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	UTP30	P36144	274 aa	Known RBP	3.01	□□□□□ -1.93
RTK1	YDL025C	MTW1	P39731	289 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	YER188W	P40103	239 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	UBC12	P52491	188 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	JAC1	P53193	184 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	YDR114C	Q04597	100 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	YOR268C	Q08734	132 aa		3.01	□□□□□ -1.93
RTK1	YDL025C	MBF1	O14467	151 aa	Known RBP	3	□□□□□ -1.93
RTK1	YDL025C	YHR032W-A	P0C5N6	59 aa		3	□□□□□ -1.93
RTK1	YDL025C	SNF4	P12904	322 aa		3	□□□□□ -1.93
RTK1	YDL025C	YKR032W	P36127	104 aa		3	□□□□□ -1.93
RTK1	YDL025C	PIR5	P46999	287 aa		3	□□□□□ -1.93
RTK1	YDL025C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
RTK1	YDL025C	GRX2	P17695	143 aa	Known RBP	2.99	□□□□□ -1.93
RTK1	YDL025C	RPL9A	P05738	191 aa	Known RBP	2.99	□□□□□ -1.93
RTK1	YDL025C	YCR090C	P25654	182 aa	Known RBP	2.99	□□□□□ -1.93
RTK1	YDL025C	MAK5	P38112	773 aa	Predicted RBP	2.99	□□□□□ -1.93
RTK1	YDL025C	RSM25	P40496	264 aa		2.99	□□□□□ -1.93
RTK1	YDL025C	RPL9B	P51401	191 aa	Known RBP	2.99	□□□□□ -1.93
RTK1	YDL025C	YGL235W	P53071	178 aa		2.99	□□□□□ -1.93
RTK1	YDL025C	PEX12	Q04370	399 aa		2.99	□□□□□ -1.93
RTK1	YDL025C	SUE1	Q06524	206 aa		2.99	□□□□□ -1.93
RTK1	YDL025C	YLR050C	Q12155	161 aa	Known RBP	2.99	□□□□□ -1.93
RTK1	YDL025C	RIO1	Q12196	484 aa	Known RBP	2.99	□□□□□ -1.93
RTK1	YDL025C	PEX11	Q12462	236 aa		2.99	□□□□□ -1.93
RTK1	YDL025C	PSF1	Q12488	208 aa		2.99	□□□□□ -1.93
RTK1	YDL025C	CNB1	P25296	175 aa		2.98	□□□□□ -1.93
RTK1	YDL025C	SEC17	P32602	292 aa		2.98	□□□□□ -1.93
RTK1	YDL025C	CLG1	P35190	452 aa		2.98	□□□□□ -1.93
RTK1	YDL025C	FIG1	P38224	298 aa		2.98	□□□□□ -1.93
RTK1	YDL025C	LSM4	P40070	187 aa	Known RBP	2.98	□□□□□ -1.93
RTK1	YDL025C	YGR026W	P53217	278 aa		2.98	□□□□□ -1.93
RTK1	YDL025C	AIM34	Q03673	198 aa		2.98	□□□□□ -1.93
RTK1	YDL025C	BRR2	P32639	2163 aa	Known RBP	2.97	□□□□□ -1.93
RTK1	YDL025C	CDC8	P00572	216 aa		2.97	□□□□□ -1.93
RTK1	YDL025C	BET1	P22804	142 aa		2.97	□□□□□ -1.93
RTK1	YDL025C	NVJ1	P38881	321 aa		2.97	□□□□□ -1.93
RTK1	YDL025C	FMP32	P43557	207 aa		2.97	□□□□□ -1.93
RTK1	YDL025C	REP2	P03872	296 aa		2.96	□□□□□ -1.93
RTK1	YDL025C	RPS28B	P0C0X0	67 aa	Known RBP	2.96	□□□□□ -1.93
RTK1	YDL025C	AHC2	P25649	128 aa		2.96	□□□□□ -1.93
RTK1	YDL025C	APJ1	P53940	528 aa		2.96	□□□□□ -1.93
RTK1	YDL025C	YDR249C	Q03787	373 aa		2.96	□□□□□ -1.93
RTK1	YDL025C	TRM12	Q04235	462 aa		2.96	□□□□□ -1.93
RTK1	YDL025C	YMR321C	Q04898	105 aa		2.96	□□□□□ -1.93
RTK1	YDL025C	MCP1	Q12106	302 aa		2.96	□□□□□ -1.93
RTK1	YDL025C	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.96	□□□□□ -1.93
RTK1	YDL025C	RPB3	P16370	318 aa	Known RBP	2.96	□□□□□ -1.94
RTK1	YDL025C	CKS1	P20486	150 aa	Known RBP	2.96	□□□□□ -1.94
RTK1	YDL025C	SEC14	P24280	304 aa	Known RBP	2.96	□□□□□ -1.94
RTK1	YDL025C	YER084W	P40057	128 aa		2.96	□□□□□ -1.94
RTK1	YDL025C	TIF34	P40217	347 aa	Known RBP	2.96	□□□□□ -1.94
RTK1	YDL025C	TMA22	P47089	198 aa	Predicted RBP	2.96	□□□□□ -1.94
RTK1	YDL025C	ARP3	P47117	449 aa	Known RBP	2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms