RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 NFICP08651 508 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ERFP50548 548 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 E2F2Q14209 437 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 GALNT3Q14435 633 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 NCF4Q15080 339 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 FCRLBQ6BAA4 426 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 ALG1LQ6GMV1 187 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 METTL2BQ6P1Q9 378 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 C1orf94Q6P1W5 598 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 KRT26Q7Z3Y9 468 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TBC1D1Q86TI0 1168 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 UBL4BQ8N7F7 174 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CABLES1Q8TDN4 633 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 LRRC8CQ8TDW0 803 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 KRT35Q92764 455 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 USP13Q92995 863 aaPredicted RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 PHF21AQ96BD5 680 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 MED30Q96HR3 178 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC43Q96MW1 224 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 GDAP1L1Q96MZ0 367 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 NOX5Q96PH1 765 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 CIB1Q99828 191 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TM6SF1Q9BZW5 370 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 TNKS2Q9H2K2 1166 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 XKR8Q9H6D3 395 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 GGT7Q9UJ14 662 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 NOVA2Q9UNW9 492 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 HPS5Q9UPZ3 1129 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 DNAH14Q0VDD8 3507 aa4.09□□□□□ -1.75
R3HDM1-220ENST00000628915 LRP5O75197 1615 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 KMOO15229 486 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 PMM2O15305 246 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 CHEK2O96017 543 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 CYP2C9P11712 490 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 CHN1P15882 459 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 ATF4P18848 351 aaPredicted RBP4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 G0S2P27469 103 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 SOX6P35712 828 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC1A1P43005 524 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 ABCG1P45844 678 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 VSNL1P62760 191 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 LACTBP83111 547 aaPredicted RBP4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 DHX9Q08211 1270 aaKnown RBP4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 SMU1Q2TAY7 513 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 LRIT3Q3SXY7 679 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 C8orf74Q6P047 294 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 RHOUQ7L0Q8 258 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 RHOT2Q8IXI1 618 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 LRRC34Q8IZ02 419 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 AVL9Q8NBF6 648 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 RIN3Q8TB24 985 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 SSH3Q8TE77 659 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 PDCD6IPQ8WUM4 868 aaKnown RBP4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 WDR24Q96S15 920 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 ZKSCAN3Q9BRR0 538 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 ADPGKQ9BRR6 497 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 ERP44Q9BS26 406 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 FTOQ9C0B1 505 aaKnown RBP eCLIP4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 KIAA1683Q9H0B3 1180 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 C12orf49Q9H741 205 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 POLR3BQ9NW08 1133 aaPredicted RBP4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 ZSWIM5Q9P217 1185 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 CTTNBP2NLQ9P2B4 639 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 CDV3Q9UKY7 258 aaKnown RBP4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 PLCL2Q9UPR0 1127 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 AP3M1Q9Y2T2 418 aa4.09□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM155AB1AL88 458 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ST8SIA5O15466 376 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 SMPD2O60906 423 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 GJA1P17302 382 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PSMA5P28066 241 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CASP5P51878 434 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 RAC1P63000 192 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CYP4F2P78329 520 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 FOXK1P85037 733 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 FANCCQ00597 558 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 OCA2Q04671 838 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CYP4F3Q08477 520 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 COASYQ13057 564 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 SGCGQ13326 291 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 RASGRF1Q13972 1273 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF124Q15973 351 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PDCD4Q53EL6 469 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 TMEM92Q6UXU6 159 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ANKS3Q6ZW76 656 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 DSG4Q86SJ6 1040 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ADCK1Q86TW2 530 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 DEPDC4Q8N2C3 294 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 MINDY2Q8NBR6 621 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PNKPQ96T60 521 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CARD14Q9BXL6 1004 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 BRD7Q9NPI1 651 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 SNTG2Q9NY99 539 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PDP2Q9P2J9 529 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 BAG5Q9UL15 447 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 C1orf232A0A0U1RR37 186 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 A0A1B0GVG6 124 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 EIF4E1BA6NMX2 242 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 A8MX80 341 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 H3BQV1 296 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms