RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 Prdm12A2AJ77 365 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Gimd1E9PW74 217 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Q3UK37 420 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Krt35Q497I4 455 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Stxbp5Q8K400 1152 aaKnown RBP18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Ergic2Q9CR89 377 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Gm382B1AXN3 1250 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Xirp1O70373 1129 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Mmp3P28862 477 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Polr2fP61219 127 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Rnf113a2Q14B01 337 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Stxbp5lQ5DQR4 1185 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Phlda1Q62392 405 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Rpf1Q7TND5 349 aaKnown RBP18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 R3hdm2Q80TM6 1044 aaKnown RBP18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Ccdc28aQ8CEI3 192 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Vps36Q91XD6 386 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Pcdhb3Q91XZ7 784 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 SncbQ91ZZ3 133 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 MesdQ9ERE7 224 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Ankrd2Q9WV06 328 aa18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Orc1Q9Z1N2 840 aaKnown RBP18.29■□□□□ 0.52
Vps53-203ENSMUST00000108419 Ralgapa2A3KGS3 1872 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Gm15262A0A140LIQ5 728 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Sclt1G5E861 688 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Gm5814J3QP80 125 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 StrnO55106 780 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Casp8O89110 480 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Mucl2P02815 138 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Msh2P43247 935 aaKnown RBP18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Nub1P54729 614 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Hace1Q3U0D9 909 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Gm5935Q497S0 212 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Dsg1aQ61495 1057 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Klra3Q64329 266 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Trim37Q6PCX9 961 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Celf4Q7TSY6 486 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 HomezQ80W88 542 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Rnaseh2bQ80ZV0 308 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Depdc1bQ8BH88 529 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Ppfia2Q8BSS9 1257 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Fam228aQ8CDW1 299 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Kct2Q8K201 259 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Tlr3Q99MB1 905 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Mrfap1Q9CQL7 125 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 ErmapQ9JLN5 566 aa18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Edf1Q9JMG1 148 aaKnown RBP18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Maged1Q9QYH6 775 aaKnown RBP18.28■□□□□ 0.52
Vps53-203ENSMUST00000108419 Tbc1d16A2ABG4 766 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Apba1B2RUJ5 842 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Gm10110D3Z5M2 615 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Ptprn2P80560 1001 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Abl2Q4JIM5 1182 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Myl6Q60605 151 aaKnown RBP18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Skiv2lQ6NZR5 1244 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Adgrg3Q8R0T6 542 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Calml4Q91WQ9 153 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Rabl3Q9D4V7 236 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Adam22Q9R1V6 904 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Wnt8bQ9WUD6 350 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Plekhg4A0A1L1SU27 1217 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Atp2c2A7L9Z8 944 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Mroh9G5E8L9 891 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Gm6121L7MUF1 212 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Grm1P97772 1199 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Asprv1Q09PK2 339 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Znf367Q0VDT2 340 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Gspt2Q149F3 632 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 TraddQ3U0V2 310 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Cyp3a16Q64481 504 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Tspyl5Q69ZB3 406 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 DcakdQ8BHC4 231 aaKnown RBP18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Snx17Q8BVL3 470 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Chn1Q91V57 459 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 4930449I24RikQ9D5E3 319 aa18.27■□□□□ 0.52
Vps53-203ENSMUST00000108419 Ptchd4B9EKX1 904 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Kpna6O35345 536 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Hoxd10P28359 340 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Tex35Q14BK3 207 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Amer2Q8CCJ4 672 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Dennd1aQ8K382 1016 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Gimap3Q99MI6 301 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Cfap57Q9D180 1249 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Uchl3Q9JKB1 230 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Rfx5Q9JL61 658 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Gjc1P28229 396 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 RcvrnP34057 202 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Mark3Q03141 753 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 HelqQ2VPA6 1069 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 FancbQ5XJY6 703 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Nlrp4fQ66X05 959 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 WlsQ6DID7 541 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Ccdc15Q8C9M2 810 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Gramd4Q8CB44 633 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Rassf9Q8K342 435 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Asb11Q9CQ31 323 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 IscuQ9D7P6 168 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Tcirg1Q9JHF5 834 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 Kcnq4Q9JK97 696 aa18.26■□□□□ 0.51
Vps53-203ENSMUST00000108419 PollQ9QXE2 573 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms