Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Gm25239-201ENSMUST00000174915 86 ntBASIC44.79■■■■■ 4.76
Snx17Q8BVL3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.66■■■■■ 4.26
Snx17Q8BVL3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.01■■■■■ 4.16
Snx17Q8BVL3 Gm24109-201ENSMUST00000175489 103 ntBASIC39.09■■■■□ 3.85
Snx17Q8BVL3 Gm15042-201ENSMUST00000120212 883 ntBASIC38.62■■■■□ 3.77
Snx17Q8BVL3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.88■■■■□ 3.65
Snx17Q8BVL3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.76■■■■□ 3.64
Snx17Q8BVL3 Gm15045-201ENSMUST00000117359 883 ntBASIC37.71■■■■□ 3.63
Snx17Q8BVL3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Snx17Q8BVL3 Gm23366-201ENSMUST00000175022 89 ntBASIC37.34■■■■□ 3.57
Snx17Q8BVL3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Snx17Q8BVL3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.61■■■■□ 3.45
Snx17Q8BVL3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.28■■■■□ 3.4
Snx17Q8BVL3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Snx17Q8BVL3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.24■■■■□ 3.39
Snx17Q8BVL3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Snx17Q8BVL3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Snx17Q8BVL3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Snx17Q8BVL3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.79■■■■□ 3.32
Snx17Q8BVL3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
Snx17Q8BVL3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.58■■■■□ 3.29
Snx17Q8BVL3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Snx17Q8BVL3 Gm25238-201ENSMUST00000174914 89 ntBASIC35.54■■■■□ 3.28
Snx17Q8BVL3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Snx17Q8BVL3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.91■■■■□ 3.18
Snx17Q8BVL3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.89■■■■□ 3.18
Snx17Q8BVL3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.87■■■■□ 3.17
Snx17Q8BVL3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Snx17Q8BVL3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Snx17Q8BVL3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.63■■■■□ 3.13
Snx17Q8BVL3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Snx17Q8BVL3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.43■■■■□ 3.1
Snx17Q8BVL3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.4■■■■□ 3.1
Snx17Q8BVL3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.31■■■■□ 3.08
Snx17Q8BVL3 Gm25262-201ENSMUST00000174934 133 ntBASIC34.3■■■■□ 3.08
Snx17Q8BVL3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.17■■■■□ 3.06
Snx17Q8BVL3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Snx17Q8BVL3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
Snx17Q8BVL3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Snx17Q8BVL3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.97■■■■□ 3.03
Snx17Q8BVL3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.94■■■■□ 3.02
Snx17Q8BVL3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.91■■■■□ 3.02
Snx17Q8BVL3 Gm27325-201ENSMUST00000175467 74 ntBASIC33.78■■■■□ 3
Snx17Q8BVL3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.71■■■□□ 2.99
Snx17Q8BVL3 Gm26115-201ENSMUST00000175605 87 ntBASIC33.66■■■□□ 2.98
Snx17Q8BVL3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Snx17Q8BVL3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.65■■■□□ 2.98
Snx17Q8BVL3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.55■■■□□ 2.96
Snx17Q8BVL3 Rab21-202ENSMUST00000218831 843 ntBASIC33.52■■■□□ 2.96
Snx17Q8BVL3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.47■■■□□ 2.95
Snx17Q8BVL3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Snx17Q8BVL3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Snx17Q8BVL3 Gm8109-201ENSMUST00000194076 746 ntBASIC33.38■■■□□ 2.93
Snx17Q8BVL3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Snx17Q8BVL3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Snx17Q8BVL3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Snx17Q8BVL3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
Snx17Q8BVL3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Snx17Q8BVL3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Snx17Q8BVL3 Psd-208ENSMUST00000224556 2034 ntBASIC33.14■■■□□ 2.9
Snx17Q8BVL3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Snx17Q8BVL3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
Snx17Q8BVL3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.06■■■□□ 2.88
Snx17Q8BVL3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.05■■■□□ 2.88
Snx17Q8BVL3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.89■■■□□ 2.86
Snx17Q8BVL3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.86■■■□□ 2.85
Snx17Q8BVL3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Snx17Q8BVL3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Snx17Q8BVL3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Snx17Q8BVL3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.63■■■□□ 2.81
Snx17Q8BVL3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.58■■■□□ 2.81
Snx17Q8BVL3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Snx17Q8BVL3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Snx17Q8BVL3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Snx17Q8BVL3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Snx17Q8BVL3 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.47■■■□□ 2.79
Snx17Q8BVL3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Snx17Q8BVL3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.44■■■□□ 2.78
Snx17Q8BVL3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Snx17Q8BVL3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Snx17Q8BVL3 Gm24804-201ENSMUST00000174982 85 ntBASIC32.32■■■□□ 2.76
Snx17Q8BVL3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Snx17Q8BVL3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Snx17Q8BVL3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.23■■■□□ 2.75
Snx17Q8BVL3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.22■■■□□ 2.75
Snx17Q8BVL3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.14■■■□□ 2.74
Snx17Q8BVL3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Snx17Q8BVL3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
Snx17Q8BVL3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.06■■■□□ 2.72
Snx17Q8BVL3 Gm27322-201ENSMUST00000184007 104 ntBASIC32.04■■■□□ 2.72
Snx17Q8BVL3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
Snx17Q8BVL3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.99■■■□□ 2.71
Snx17Q8BVL3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.98■■■□□ 2.71
Snx17Q8BVL3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.91■■■□□ 2.7
Snx17Q8BVL3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Snx17Q8BVL3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
Snx17Q8BVL3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Snx17Q8BVL3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Snx17Q8BVL3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Snx17Q8BVL3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms