RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 YGL235WP53071 178 aa-3.52□□□□□ -2.97
snR53snR53 ARO80Q04052 950 aa-3.52□□□□□ -2.97
snR53snR53 LPP1Q04396 274 aa-3.52□□□□□ -2.97
snR53snR53 YOL164W-AQ3E7A5 60 aa-3.52□□□□□ -2.97
snR53snR53 UTP20P35194 2493 aaKnown RBP-3.53□□□□□ -2.97
snR53snR53 MATALPHA2P0CY08 210 aa-3.53□□□□□ -2.97
snR53snR53 HMLALPHA2P0CY09 210 aa-3.53□□□□□ -2.97
snR53snR53 FIP1P45976 327 aa-3.53□□□□□ -2.97
snR53snR53 YGL230CP53074 147 aa-3.53□□□□□ -2.97
snR53snR53 YLR173WQ06247 608 aa-3.53□□□□□ -2.97
snR53snR53 YLR413WQ06689 675 aa-3.53□□□□□ -2.97
snR53snR53 IGO2Q9P305 131 aa-3.53□□□□□ -2.97
snR53snR53 TAL1P15019 335 aaKnown RBP-3.54□□□□□ -2.98
snR53snR53 STF2P16965 84 aa-3.54□□□□□ -2.98
snR53snR53 GSP2P32836 220 aaKnown RBP-3.54□□□□□ -2.98
snR53snR53 DAD2P36162 133 aa-3.54□□□□□ -2.98
snR53snR53 MVB12P42939 101 aa-3.54□□□□□ -2.98
snR53snR53 SPT7P35177 1332 aa-3.54□□□□□ -2.98
snR53snR53 GPI12P23797 304 aa-3.55□□□□□ -2.98
snR53snR53 YBL010CP32788 280 aa-3.55□□□□□ -2.98
snR53snR53 AIM20P40451 204 aa-3.55□□□□□ -2.98
snR53snR53 CCC1P47818 322 aa-3.55□□□□□ -2.98
snR53snR53 IRC23Q08416 157 aa-3.55□□□□□ -2.98
snR53snR53 ERD2P18414 219 aa-3.56□□□□□ -2.98
snR53snR53 VPS3P23643 1011 aa-3.56□□□□□ -2.98
snR53snR53 AUA1P32450 94 aa-3.56□□□□□ -2.98
snR53snR53 CUP9P41817 306 aa-3.56□□□□□ -2.98
snR53snR53 YJR012CP47087 207 aa-3.56□□□□□ -2.98
snR53snR53 RRN5Q02983 363 aa-3.56□□□□□ -2.98
snR53snR53 VAC14Q06708 880 aa-3.56□□□□□ -2.98
snR53snR53 CSM1P25651 190 aa-3.57□□□□□ -2.98
snR53snR53 GOS1P38736 223 aa-3.57□□□□□ -2.98
snR53snR53 ALG13P53178 202 aa-3.57□□□□□ -2.98
snR53snR53 MCP1Q12106 302 aa-3.57□□□□□ -2.98
snR53snR53 YPL229WQ99395 206 aa-3.57□□□□□ -2.98
snR53snR53 END3P39013 349 aa-3.58□□□□□ -2.98
snR53snR53 SRB7P47822 140 aa-3.59□□□□□ -2.98
snR53snR53 PRM8P53174 237 aa-3.59□□□□□ -2.98
snR53snR53 VPS9P54787 451 aa-3.59□□□□□ -2.98
snR53snR53 RRP17Q04031 235 aaPredicted RBP-3.59□□□□□ -2.98
snR53snR53 SEI1Q06058 285 aa-3.59□□□□□ -2.98
snR53snR53 HUG1Q6Q5K6 68 aa-3.59□□□□□ -2.98
snR53snR53 APS1P35181 156 aa-3.6□□□□□ -2.99
snR53snR53 RIB4P50861 169 aaPredicted RBP-3.6□□□□□ -2.99
snR53snR53 RRT8Q08219 342 aa-3.6□□□□□ -2.99
snR53snR53 YDR010CQ12426 110 aa-3.6□□□□□ -2.99
snR53snR53 PHO13P19881 312 aa-3.61□□□□□ -2.99
snR53snR53 AST2P39945 430 aaKnown RBP-3.61□□□□□ -2.99
snR53snR53 MPM1P40364 252 aa-3.61□□□□□ -2.99
snR53snR53 YPR098CQ06089 161 aa-3.61□□□□□ -2.99
snR53snR53 NSG1P38837 291 aa-3.62□□□□□ -2.99
snR53snR53 SEC28P40509 296 aaKnown RBP-3.62□□□□□ -2.99
snR53snR53 VAM10Q08474 114 aa-3.62□□□□□ -2.99
snR53snR53 YIL177CP40434 1758 aa-3.62□□□□□ -2.99
snR53snR53 YJL225CP40889 1758 aa-3.62□□□□□ -2.99
snR53snR53 POR1P04840 283 aaKnown RBP-3.63□□□□□ -2.99
snR53snR53 YSR3P23501 404 aa-3.63□□□□□ -2.99
snR53snR53 ARP3P47117 449 aaKnown RBP-3.63□□□□□ -2.99
snR53snR53 YNL190WP53872 204 aa-3.63□□□□□ -2.99
snR53snR53 AVO2Q04749 426 aa-3.63□□□□□ -2.99
snR53snR53 YCR023CP25351 611 aa-3.64□□□□□ -2.99
snR53snR53 YBR096WP38256 230 aa-3.64□□□□□ -2.99
snR53snR53 BXI1P48558 297 aa-3.64□□□□□ -2.99
snR53snR53 DID2P69771 204 aa-3.64□□□□□ -2.99
snR53snR53 YDR286CQ05530 114 aa-3.64□□□□□ -2.99
snR53snR53 BRR2P32639 2163 aaKnown RBP-3.64□□□□□ -2.99
snR53snR53 YLR422WQ06409 1932 aa-3.65□□□□□ -2.99
snR53snR53 SEC17P32602 292 aa-3.65□□□□□ -2.99
snR53snR53 RPC25P35718 212 aa-3.65□□□□□ -2.99
snR53snR53 GET1P53192 235 aa-3.65□□□□□ -2.99
snR53snR53 YLR297WQ05899 129 aa-3.65□□□□□ -2.99
snR53snR53 TDA8Q6B2U8 126 aa-3.65□□□□□ -2.99
snR53snR53 CDC37P06101 506 aaKnown RBP-3.66□□□□□ -3
snR53snR53 JNM1P36224 373 aa-3.66□□□□□ -3
snR53snR53 YBR027CP38220 110 aa-3.66□□□□□ -3
snR53snR53 YMR030W-AQ3E760 96 aa-3.66□□□□□ -3
snR53snR53 RPL24AP04449 155 aaKnown RBP-3.67□□□□□ -3
snR53snR53 SAR1P20606 190 aaKnown RBP-3.67□□□□□ -3
snR53snR53 ATP15P21306 62 aa-3.67□□□□□ -3
snR53snR53 RPL24BP24000 155 aaKnown RBP-3.67□□□□□ -3
snR53snR53 SWE1P32944 819 aa-3.67□□□□□ -3
snR53snR53 GAT4P40569 121 aa-3.67□□□□□ -3
snR53snR53 VOA1P53262 265 aa-3.67□□□□□ -3
snR53snR53 HHT1P61830 136 aa-3.67□□□□□ -3
snR53snR53 YLR194CQ05777 254 aa-3.67□□□□□ -3
snR53snR53 SKS1Q12505 502 aa-3.67□□□□□ -3
snR53snR53 SEY1Q99287 776 aa-3.67□□□□□ -3
snR53snR53 CFT1Q06632 1357 aaKnown RBP-3.67□□□□□ -3
snR53snR53 OM45P16547 393 aa-3.68□□□□□ -3
snR53snR53 YHR127WP38833 243 aaKnown RBP-3.68□□□□□ -3
snR53snR53 YMR144WP40214 342 aaKnown RBP-3.68□□□□□ -3
snR53snR53 YJL009WP47078 108 aa-3.68□□□□□ -3
snR53snR53 NOP19P53317 196 aaPredicted RBP-3.68□□□□□ -3
snR53snR53 RHO3Q00245 231 aaKnown RBP-3.68□□□□□ -3
snR53snR53 COA6Q3E846 104 aa-3.68□□□□□ -3
snR53snR53 UTP30P36144 274 aaKnown RBP-3.69□□□□□ -3
snR53snR53 SMB1P40018 196 aaKnown RBP-3.69□□□□□ -3
snR53snR53 RTC4P53850 401 aa-3.69□□□□□ -3
snR53snR53 YML108WQ03759 105 aa-3.69□□□□□ -3
snR53snR53 GGA1Q06336 557 aa-3.69□□□□□ -3
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms