RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR11, Length 258 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR11snR11 YAR068WP39564 161 aa2.4□□□□□ -2.03
snR11snR11 GLE2P40066 365 aa2.4□□□□□ -2.03
snR11snR11 FIS1P40515 155 aa2.4□□□□□ -2.03
snR11snR11 OST2P46964 130 aa2.4□□□□□ -2.03
snR11snR11 PIR5P46999 287 aa2.4□□□□□ -2.03
snR11snR11 LSM1P47017 172 aaKnown RBP2.4□□□□□ -2.03
snR11snR11 RSM27P53305 110 aa2.4□□□□□ -2.03
snR11snR11 MPA43P53583 542 aaPredicted RBP2.4□□□□□ -2.03
snR11snR11 SWP1Q02795 286 aa2.4□□□□□ -2.03
snR11snR11 DYN3Q04949 312 aa2.4□□□□□ -2.03
snR11snR11 YLR053CQ12026 108 aa2.4□□□□□ -2.03
snR11snR11 RIO1Q12196 484 aaKnown RBP2.4□□□□□ -2.03
snR11snR11 PSF1Q12488 208 aa2.4□□□□□ -2.03
snR11snR11 YPR096CO13587 100 aa2.39□□□□□ -2.03
snR11snR11 REP2P03872 296 aa2.39□□□□□ -2.03
snR11snR11 YHR032W-AP0C5N6 59 aa2.39□□□□□ -2.03
snR11snR11 SNF4P12904 322 aa2.39□□□□□ -2.03
snR11snR11 TKL2P33315 681 aa2.39□□□□□ -2.03
snR11snR11 CSH1P38287 376 aa2.39□□□□□ -2.03
snR11snR11 SLM6P38343 150 aa2.39□□□□□ -2.03
snR11snR11 YML108WQ03759 105 aa2.39□□□□□ -2.03
snR11snR11 GPI17Q04080 534 aa2.39□□□□□ -2.03
snR11snR11 HNT1Q04344 158 aaKnown RBP2.39□□□□□ -2.03
snR11snR11 SHH4Q06236 168 aa2.39□□□□□ -2.03
snR11snR11 YPR063CQ12160 140 aa2.39□□□□□ -2.03
snR11snR11 Q0255P03881 472 aa2.38□□□□□ -2.03
snR11snR11 RPB3P16370 318 aaKnown RBP2.38□□□□□ -2.03
snR11snR11 ATP15P21306 62 aa2.38□□□□□ -2.03
snR11snR11 SRP102P36057 244 aaPredicted RBP2.38□□□□□ -2.03
snR11snR11 YER084WP40057 128 aa2.38□□□□□ -2.03
snR11snR11 FMP32P43557 207 aa2.38□□□□□ -2.03
snR11snR11 ECO1P43605 281 aa2.38□□□□□ -2.03
snR11snR11 CAB4P53332 305 aa2.38□□□□□ -2.03
snR11snR11 PGA1P53896 198 aa2.38□□□□□ -2.03
snR11snR11 DGA1Q08650 418 aa2.38□□□□□ -2.03
snR11snR11 YPR202WQ08993 238 aa2.38□□□□□ -2.03
snR11snR11 RPL9AP05738 191 aaKnown RBP2.37□□□□□ -2.03
snR11snR11 CMD1P06787 147 aaKnown RBP2.37□□□□□ -2.03
snR11snR11 PET54P10834 293 aa2.37□□□□□ -2.03
snR11snR11 CKS1P20486 150 aaKnown RBP2.37□□□□□ -2.03
snR11snR11 RPL9BP51401 191 aaKnown RBP2.37□□□□□ -2.03
snR11snR11 SPG3Q04398 127 aaPredicted RBP2.37□□□□□ -2.03
snR11snR11 SUE1Q06524 206 aa2.37□□□□□ -2.03
snR11snR11 MHT1Q12525 324 aa2.37□□□□□ -2.03
snR11snR11 BET1P22804 142 aa2.36□□□□□ -2.03
snR11snR11 SEC14P24280 304 aaKnown RBP2.36□□□□□ -2.03
snR11snR11 CPR5P35176 225 aa2.36□□□□□ -2.03
snR11snR11 SOK1P40317 901 aa2.36□□□□□ -2.03
snR11snR11 ARC15P40518 154 aaRIP-Chip data2.36□□□□□ -2.03not detected
snR11snR11 BUD13P46947 266 aaPredicted RBP2.36□□□□□ -2.03
snR11snR11 YOL014WQ08110 124 aa2.36□□□□□ -2.03
snR11snR11 MPD1Q12404 318 aaKnown RBP2.36□□□□□ -2.03
snR11snR11 TIM9O74700 87 aa2.35□□□□□ -2.03
snR11snR11 CDC8P00572 216 aa2.35□□□□□ -2.03
snR11snR11 MIG1P27705 504 aa2.35□□□□□ -2.03
snR11snR11 SKI6P46948 246 aaPredicted RBP2.35□□□□□ -2.03
snR11snR11 YGL088WP53151 121 aa2.35□□□□□ -2.03
snR11snR11 HPT1Q04178 221 aaKnown RBP2.35□□□□□ -2.03
snR11snR11 SPC2Q04969 178 aa2.35□□□□□ -2.03
snR11snR11 EFG1Q3E705 233 aaKnown RBP2.35□□□□□ -2.03
snR11snR11 SFK1P35735 353 aa2.34□□□□□ -2.03
snR11snR11 YER188WP40103 239 aa2.34□□□□□ -2.03
snR11snR11 GPI14P47088 403 aaKnown RBP2.34□□□□□ -2.03
snR11snR11 MOG1P47123 218 aa2.34□□□□□ -2.03
snR11snR11 COS6P53344 381 aa2.34□□□□□ -2.03
snR11snR11 NAT3Q06504 195 aa2.34□□□□□ -2.03
snR11snR11 SAS5Q99314 248 aa2.34□□□□□ -2.03
snR11snR11 PDR18P53756 1333 aa2.34□□□□□ -2.04
snR11snR11 YIL177CP40434 1758 aa2.33□□□□□ -2.04
snR11snR11 YJL225CP40889 1758 aa2.33□□□□□ -2.04
snR11snR11 UBI4P0CG63 381 aaKnown RBP2.33□□□□□ -2.04
snR11snR11 URA5P13298 226 aaKnown RBP2.33□□□□□ -2.04
snR11snR11 OCH1P31755 480 aa2.33□□□□□ -2.04
snR11snR11 UTR5P32630 166 aa2.33□□□□□ -2.04
snR11snR11 TVP38P36164 337 aa2.33□□□□□ -2.04
snR11snR11 SKG1P36169 355 aa2.33□□□□□ -2.04
snR11snR11 MRPL17P36528 281 aa2.33□□□□□ -2.04
snR11snR11 OPY1P38271 328 aa2.33□□□□□ -2.04
snR11snR11 SER2P42941 309 aa2.33□□□□□ -2.04
snR11snR11 YGL101WP53144 215 aa2.33□□□□□ -2.04
snR11snR11 ORM1P53224 222 aa2.33□□□□□ -2.04
snR11snR11 YDR274CP87283 123 aa2.33□□□□□ -2.04
snR11snR11 YDR114CQ04597 100 aa2.33□□□□□ -2.04
snR11snR11 YLR031WQ07978 186 aa2.33□□□□□ -2.04
snR11snR11 FYV12Q08559 129 aa2.33□□□□□ -2.04
snR11snR11 DAS2Q12084 232 aa2.33□□□□□ -2.04
snR11snR11 YLR046CQ12253 270 aa2.33□□□□□ -2.04
snR11snR11 ATO3Q12359 275 aa2.33□□□□□ -2.04
snR11snR11 YML100W-AQ8TGT0 57 aa2.33□□□□□ -2.04
snR11snR11 ADH3P07246 375 aaKnown RBP2.32□□□□□ -2.04
snR11snR11 RPL2AP0CX45 254 aaKnown RBP2.32□□□□□ -2.04
snR11snR11 RPL2BP0CX46 254 aaKnown RBP2.32□□□□□ -2.04
snR11snR11 KRE1P17260 313 aa2.32□□□□□ -2.04
snR11snR11 SPO13P23624 291 aa2.32□□□□□ -2.04
snR11snR11 BUB2P26448 306 aaPredicted RBP2.32□□□□□ -2.04
snR11snR11 VMA11P32842 164 aa2.32□□□□□ -2.04
snR11snR11 YEA4P40004 342 aa2.32□□□□□ -2.04
snR11snR11 RFC2P40348 353 aa2.32□□□□□ -2.04
snR11snR11 YFL019CP43576 117 aa2.32□□□□□ -2.04
snR11snR11 SNX4P47057 423 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms