RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USV1	YPL230W	RPS24B	P0CX32	135 aa	Known RBP	2.71	□□□□□ -1.98
USV1	YPL230W	URA5	P13298	226 aa	Known RBP	2.71	□□□□□ -1.98
USV1	YPL230W	ICE2	P40499	491 aa		2.71	□□□□□ -1.98
USV1	YPL230W	GON7	P46984	123 aa		2.71	□□□□□ -1.98
USV1	YPL230W	ARP3	P47117	449 aa	Known RBP	2.71	□□□□□ -1.98
USV1	YPL230W	TDA4	P47153	279 aa		2.71	□□□□□ -1.98
USV1	YPL230W	YGL235W	P53071	178 aa		2.71	□□□□□ -1.98
USV1	YPL230W	SWP1	Q02795	286 aa		2.71	□□□□□ -1.98
USV1	YPL230W	SHH4	Q06236	168 aa		2.71	□□□□□ -1.98
USV1	YPL230W	MCP1	Q12106	302 aa		2.71	□□□□□ -1.98
USV1	YPL230W	PEX11	Q12462	236 aa		2.71	□□□□□ -1.98
USV1	YPL230W	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.71	□□□□□ -1.98
USV1	YPL230W	YFR032C-B	Q8TGU2	87 aa		2.71	□□□□□ -1.98
USV1	YPL230W	SAS5	Q99314	248 aa		2.71	□□□□□ -1.98
USV1	YPL230W	BET1	P22804	142 aa		2.7	□□□□□ -1.98
USV1	YPL230W	SRP102	P36057	244 aa	Predicted RBP	2.7	□□□□□ -1.98
USV1	YPL230W	TVP38	P36164	337 aa		2.7	□□□□□ -1.98
USV1	YPL230W	FMP23	P38231	175 aa		2.7	□□□□□ -1.98
USV1	YPL230W	YER188W	P40103	239 aa		2.7	□□□□□ -1.98
USV1	YPL230W	SKI6	P46948	246 aa	Predicted RBP	2.7	□□□□□ -1.98
USV1	YPL230W	MOG1	P47123	218 aa		2.7	□□□□□ -1.98
USV1	YPL230W	ARO8	P53090	500 aa	Known RBP	2.7	□□□□□ -1.98
USV1	YPL230W	GPI17	Q04080	534 aa		2.7	□□□□□ -1.98
USV1	YPL230W	MHT1	Q12525	324 aa		2.7	□□□□□ -1.98
USV1	YPL230W	EFG1	Q3E705	233 aa	Known RBP	2.7	□□□□□ -1.98
USV1	YPL230W	CDC8	P00572	216 aa		2.69	□□□□□ -1.98
USV1	YPL230W	CKS1	P20486	150 aa	Known RBP	2.69	□□□□□ -1.98
USV1	YPL230W	YKL102C	P34249	101 aa		2.69	□□□□□ -1.98
USV1	YPL230W	YFH7	P43591	353 aa		2.69	□□□□□ -1.98
USV1	YPL230W	HNT1	Q04344	158 aa	Known RBP	2.69	□□□□□ -1.98
USV1	YPL230W	DYN3	Q04949	312 aa		2.69	□□□□□ -1.98
USV1	YPL230W	BRX1	Q08235	291 aa	Known RBP	2.69	□□□□□ -1.98
USV1	YPL230W	YER084W	P40057	128 aa		2.68	□□□□□ -1.98
USV1	YPL230W	SBH2	P52871	88 aa		2.68	□□□□□ -1.98
USV1	YPL230W	YGL088W	P53151	121 aa		2.68	□□□□□ -1.98
USV1	YPL230W	NQM1	P53228	333 aa	Predicted RBP	2.68	□□□□□ -1.98
USV1	YPL230W	HSK3	P69852	69 aa		2.68	□□□□□ -1.98
USV1	YPL230W	MAK3	Q03503	176 aa		2.68	□□□□□ -1.98
USV1	YPL230W	YDR114C	Q04597	100 aa		2.68	□□□□□ -1.98
USV1	YPL230W	YPR195C	Q06594	109 aa		2.68	□□□□□ -1.98
USV1	YPL230W	DGA1	Q08650	418 aa		2.68	□□□□□ -1.98
USV1	YPL230W	AKR2	Q12013	749 aa		2.68	□□□□□ -1.98
USV1	YPL230W	YPR014C	Q6B0W2	109 aa		2.68	□□□□□ -1.98
USV1	YPL230W	RSA4	P25382	515 aa	Known RBP	2.67	□□□□□ -1.98
USV1	YPL230W	CTR2	P38865	189 aa		2.67	□□□□□ -1.98
USV1	YPL230W	AIM2	P39721	246 aa		2.67	□□□□□ -1.98
USV1	YPL230W	SMD3	P43321	101 aa	Known RBP	2.67	□□□□□ -1.98
USV1	YPL230W	PIR5	P46999	287 aa		2.67	□□□□□ -1.98
USV1	YPL230W	SNX4	P47057	423 aa		2.67	□□□□□ -1.98
USV1	YPL230W	YJR111C	P47148	283 aa	Known RBP	2.67	□□□□□ -1.98
USV1	YPL230W	YDC1	Q02896	317 aa		2.67	□□□□□ -1.98
USV1	YPL230W	TRM12	Q04235	462 aa		2.67	□□□□□ -1.98
USV1	YPL230W	PET20	Q99373	253 aa		2.67	□□□□□ -1.98
USV1	YPL230W	ATP15	P21306	62 aa		2.66	□□□□□ -1.98
USV1	YPL230W	SPO13	P23624	291 aa		2.66	□□□□□ -1.98
USV1	YPL230W	SCM4	P32564	187 aa		2.66	□□□□□ -1.98
USV1	YPL230W	FMT1	P32785	401 aa		2.66	□□□□□ -1.98
USV1	YPL230W	VMA11	P32842	164 aa		2.66	□□□□□ -1.98
USV1	YPL230W	MPA43	P53583	542 aa	Predicted RBP	2.66	□□□□□ -1.98
USV1	YPL230W	TMA20	P89886	181 aa	Predicted RBP	2.66	□□□□□ -1.98
USV1	YPL230W	ARR2	Q06597	130 aa		2.66	□□□□□ -1.98
USV1	YPL230W	TSC3	Q3E790	80 aa		2.66	□□□□□ -1.98
USV1	YPL230W	TIM9	O74700	87 aa		2.65	□□□□□ -1.99
USV1	YPL230W	SCO1	P23833	295 aa		2.65	□□□□□ -1.99
USV1	YPL230W	OCH1	P31755	480 aa		2.65	□□□□□ -1.99
USV1	YPL230W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
USV1	YPL230W	YKR032W	P36127	104 aa		2.65	□□□□□ -1.99
USV1	YPL230W	MRPL17	P36528	281 aa		2.65	□□□□□ -1.99
USV1	YPL230W	SER2	P42941	309 aa		2.65	□□□□□ -1.99
USV1	YPL230W	XPT1	P47165	209 aa		2.65	□□□□□ -1.99
USV1	YPL230W	DSK2	P48510	373 aa		2.65	□□□□□ -1.99
USV1	YPL230W	CAB4	P53332	305 aa		2.65	□□□□□ -1.99
USV1	YPL230W	FEX1	Q08913	375 aa		2.65	□□□□□ -1.99
USV1	YPL230W	FEX2	Q08991	375 aa		2.65	□□□□□ -1.99
USV1	YPL230W	YHR032W-A	P0C5N6	59 aa		2.64	□□□□□ -1.99
USV1	YPL230W	YCR023C	P25351	611 aa		2.64	□□□□□ -1.99
USV1	YPL230W	UBC8	P28263	218 aa		2.64	□□□□□ -1.99
USV1	YPL230W	YEA4	P40004	342 aa		2.64	□□□□□ -1.99
USV1	YPL230W	SOK1	P40317	901 aa		2.64	□□□□□ -1.99
USV1	YPL230W	RFC2	P40348	353 aa		2.64	□□□□□ -1.99
USV1	YPL230W	GVP36	P40531	326 aa	Known RBP	2.64	□□□□□ -1.99
USV1	YPL230W	YGL101W	P53144	215 aa		2.64	□□□□□ -1.99
USV1	YPL230W	YDR476C	Q03362	224 aa		2.64	□□□□□ -1.99
USV1	YPL230W	SPC2	Q04969	178 aa		2.64	□□□□□ -1.99
USV1	YPL230W	YDL180W	Q12301	547 aa		2.64	□□□□□ -1.99
USV1	YPL230W	YLR412C-A	Q3E742	68 aa		2.64	□□□□□ -1.99
USV1	YPL230W	MSW1	P04803	379 aa		2.63	□□□□□ -1.99
USV1	YPL230W	PBI2	P0CT04	75 aa	Known RBP	2.63	□□□□□ -1.99
USV1	YPL230W	PET54	P10834	293 aa		2.63	□□□□□ -1.99
USV1	YPL230W	KRE1	P17260	313 aa		2.63	□□□□□ -1.99
USV1	YPL230W	UMP1	P38293	148 aa		2.63	□□□□□ -1.99
USV1	YPL230W	PRM10	P42946	383 aa		2.63	□□□□□ -1.99
USV1	YPL230W	YPR127W	Q06494	345 aa		2.63	□□□□□ -1.99
USV1	YPL230W	YLR046C	Q12253	270 aa		2.63	□□□□□ -1.99
USV1	YPL230W	ODC2	Q99297	307 aa		2.63	□□□□□ -1.99
USV1	YPL230W	RPL26A	P05743	127 aa	Known RBP	2.62	□□□□□ -1.99
USV1	YPL230W	BUB2	P26448	306 aa	Predicted RBP	2.62	□□□□□ -1.99
USV1	YPL230W	POP7	P38291	140 aa		2.62	□□□□□ -1.99
USV1	YPL230W	YHL026C	P38740	315 aa		2.62	□□□□□ -1.99
USV1	YPL230W	NSG1	P38837	291 aa		2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 84.7 ms