RNA–Protein interactions for RNA: YOR360C

PDE2, Transcript of High-affinity cyclic AMP phosphodiesterase, yeast

Gene PDE2, Length 1,581 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDE2	YOR360C	YBR219C	P38317	127 aa		0.65	□□□□□ -2.31
PDE2	YOR360C	HMF1	P40037	129 aa	Known RBP	0.65	□□□□□ -2.31
PDE2	YOR360C	VTC1	P40046	129 aa	RIP-Chip data	0.65	□□□□□ -2.31	not detected
PDE2	YOR360C	GLE2	P40066	365 aa		0.65	□□□□□ -2.31
PDE2	YOR360C	YNL217W	P40152	326 aa		0.65	□□□□□ -2.31
PDE2	YOR360C	GVP36	P40531	326 aa	Known RBP	0.65	□□□□□ -2.31
PDE2	YOR360C	DOC1	P53068	250 aa		0.65	□□□□□ -2.31
PDE2	YOR360C	MMS2	P53152	137 aa		0.65	□□□□□ -2.31
PDE2	YOR360C	COG5	P53951	403 aa		0.65	□□□□□ -2.31
PDE2	YOR360C	GGA1	Q06336	557 aa		0.65	□□□□□ -2.31
PDE2	YOR360C	YNG1	Q08465	219 aa		0.65	□□□□□ -2.31
PDE2	YOR360C	FLO9	P39712	1322 aa		0.65	□□□□□ -2.31
PDE2	YOR360C	IKI3	Q06706	1349 aa	Known RBP	0.65	□□□□□ -2.31
PDE2	YOR360C	JIP3	O13555	125 aa		0.64	□□□□□ -2.31
PDE2	YOR360C	SIR2	P06700	562 aa		0.64	□□□□□ -2.31
PDE2	YOR360C	MRS1	P07266	363 aa		0.64	□□□□□ -2.31
PDE2	YOR360C	URA5	P13298	226 aa	Known RBP	0.64	□□□□□ -2.31
PDE2	YOR360C	RPB3	P16370	318 aa	Known RBP	0.64	□□□□□ -2.31
PDE2	YOR360C	ATP15	P21306	62 aa		0.64	□□□□□ -2.31
PDE2	YOR360C	MDH2	P22133	377 aa		0.64	□□□□□ -2.31
PDE2	YOR360C	YET1	P35723	206 aa		0.64	□□□□□ -2.31
PDE2	YOR360C	SVP26	P38869	228 aa		0.64	□□□□□ -2.31
PDE2	YOR360C	GAA1	P39012	614 aa		0.64	□□□□□ -2.31
PDE2	YOR360C	MET5	P47169	1442 aa		0.64	□□□□□ -2.31
PDE2	YOR360C	RPL27A	P0C2H6	136 aa	Known RBP	0.63	□□□□□ -2.31
PDE2	YOR360C	CKS1	P20486	150 aa	Known RBP	0.63	□□□□□ -2.31
PDE2	YOR360C	ADE1	P27616	306 aa		0.63	□□□□□ -2.31
PDE2	YOR360C	SNC2	P33328	115 aa		0.63	□□□□□ -2.31
PDE2	YOR360C	OPY1	P38271	328 aa		0.63	□□□□□ -2.31
PDE2	YOR360C	YBR285W	P38354	144 aa		0.63	□□□□□ -2.31
PDE2	YOR360C	AVT2	P39981	480 aa		0.63	□□□□□ -2.31
PDE2	YOR360C	CSI2	Q08054	341 aa		0.63	□□□□□ -2.31
PDE2	YOR360C	GPM2	Q12008	311 aa		0.63	□□□□□ -2.31
PDE2	YOR360C	FSF1	Q12029	327 aa	Known RBP	0.63	□□□□□ -2.31
PDE2	YOR360C	IGO2	Q9P305	131 aa		0.63	□□□□□ -2.31
PDE2	YOR360C	MBF1	O14467	151 aa	Known RBP	0.62	□□□□□ -2.31
PDE2	YOR360C	OCH1	P31755	480 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	ASF2	P32448	525 aa	Predicted RBP	0.62	□□□□□ -2.31
PDE2	YOR360C	YKR045C	P36138	183 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	ERG10	P41338	398 aa	Known RBP	0.62	□□□□□ -2.31
PDE2	YOR360C	ARP3	P47117	449 aa	Known RBP	0.62	□□□□□ -2.31
PDE2	YOR360C	MPC3	P53311	146 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	BUD25	P85052	153 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	HNT1	Q04344	158 aa	Known RBP	0.62	□□□□□ -2.31
PDE2	YOR360C	YLR162W	Q06235	118 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	GRE1	Q08969	168 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	YLR236C	A0A023PZG4	107 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	YOL162W	P0CF19	215 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	CNB1	P25296	175 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	PAN3	P36102	679 aa	Predicted RBP	0.62	□□□□□ -2.31
PDE2	YOR360C	UBC12	P52491	188 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	ARO8	P53090	500 aa	Known RBP	0.62	□□□□□ -2.31
PDE2	YOR360C	SAY1	P53324	424 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	YNL184C	P53876	108 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	ARO80	Q04052	950 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	NOC4	Q06512	552 aa	Predicted RBP	0.62	□□□□□ -2.31
PDE2	YOR360C	YOL014W	Q08110	124 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	DGA1	Q08650	418 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	ATG40	Q99325	256 aa		0.62	□□□□□ -2.31
PDE2	YOR360C	POR1	P04840	283 aa	Known RBP	0.61	□□□□□ -2.31
PDE2	YOR360C	KDX1	P36005	433 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	VMA22	P38784	181 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	TVP23	P38962	199 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	YEA4	P40004	342 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	YER135C	P40082	130 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	PDS1	P40316	373 aa	Predicted RBP	0.61	□□□□□ -2.31
PDE2	YOR360C	SER2	P42941	309 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	ERJ5	P43613	295 aa	Predicted RBP	0.61	□□□□□ -2.31
PDE2	YOR360C	YJR111C	P47148	283 aa	Known RBP	0.61	□□□□□ -2.31
PDE2	YOR360C	KNH1	P50112	268 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	GIM3	P53900	129 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	YMR099C	Q03161	297 aa	Known RBP	0.61	□□□□□ -2.31
PDE2	YOR360C	FUS2	Q05670	677 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	ANT1	Q06497	328 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	YOL024W	Q08172	172 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	ODC2	Q99297	307 aa		0.61	□□□□□ -2.31
PDE2	YOR360C	CHD1	P32657	1468 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	QCR8	P08525	94 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	RPL2A	P0CX45	254 aa	Known RBP	0.6	□□□□□ -2.31
PDE2	YOR360C	RPL2B	P0CX46	254 aa	Known RBP	0.6	□□□□□ -2.31
PDE2	YOR360C	SPO13	P23624	291 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	TRX3	P25372	127 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	TAH1	P25638	111 aa	Predicted RBP	0.6	□□□□□ -2.31
PDE2	YOR360C	YCR090C	P25654	182 aa	Known RBP	0.6	□□□□□ -2.31
PDE2	YOR360C	TMA19	P35691	167 aa	Known RBP	0.6	□□□□□ -2.31
PDE2	YOR360C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
PDE2	YOR360C	CAF4	P36130	643 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	FMP23	P38231	175 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	YBR209W	P38311	105 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	SKI6	P46948	246 aa	Predicted RBP	0.6	□□□□□ -2.31
PDE2	YOR360C	HOP2	P53187	214 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	POP3	P53833	195 aa	Predicted RBP	0.6	□□□□□ -2.31
PDE2	YOR360C	NUP49	Q02199	472 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	BRX1	Q08235	291 aa	Known RBP	0.6	□□□□□ -2.31
PDE2	YOR360C	RAD28	Q12021	506 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	RIO1	Q12196	484 aa	Known RBP	0.6	□□□□□ -2.31
PDE2	YOR360C	YML100W-A	Q8TGT0	57 aa		0.6	□□□□□ -2.31
PDE2	YOR360C	YAR023C	D6VPM8	179 aa		0.59	□□□□□ -2.31
PDE2	YOR360C	SNF4	P12904	322 aa		0.59	□□□□□ -2.31
PDE2	YOR360C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms