RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W YFH1Q07540 174 aa5.36□□□□□ -1.55
LSC1YOR142W SCP1Q08873 200 aa5.36□□□□□ -1.55
LSC1YOR142W FEX2Q08991 375 aa5.36□□□□□ -1.55
LSC1YOR142W JID1Q12350 301 aa5.36□□□□□ -1.55
LSC1YOR142W BOL1Q3E793 110 aa5.36□□□□□ -1.55
LSC1YOR142W SPS2P08459 502 aa5.35□□□□□ -1.55
LSC1YOR142W HEM13P11353 328 aaKnown RBP5.35□□□□□ -1.55
LSC1YOR142W PHO85P17157 305 aa5.35□□□□□ -1.55
LSC1YOR142W RNA14P25298 677 aaKnown RBP5.35□□□□□ -1.55
LSC1YOR142W COS8P38723 381 aa5.35□□□□□ -1.55
LSC1YOR142W AIM20P40451 204 aa5.35□□□□□ -1.55
LSC1YOR142W LSM1P47017 172 aaKnown RBP5.35□□□□□ -1.55
LSC1YOR142W GIM3P53900 129 aa5.35□□□□□ -1.55
LSC1YOR142W CAB5Q03941 241 aa5.35□□□□□ -1.55
LSC1YOR142W VBA1Q04301 562 aa5.35□□□□□ -1.55
LSC1YOR142W RTT103Q05543 409 aa5.35□□□□□ -1.55
LSC1YOR142W PEX10Q05568 337 aa5.35□□□□□ -1.55
LSC1YOR142W MCH1Q07376 486 aa5.35□□□□□ -1.55
LSC1YOR142W RDI1Q12434 202 aa5.35□□□□□ -1.55
LSC1YOR142W RPL9AP05738 191 aaKnown RBP5.34□□□□□ -1.55
LSC1YOR142W RAD52P06778 471 aaKnown RBP5.34□□□□□ -1.55
LSC1YOR142W NHP6BP11633 99 aaKnown RBP5.34□□□□□ -1.55
LSC1YOR142W YMR31P19955 123 aa5.34□□□□□ -1.55
LSC1YOR142W YKR045CP36138 183 aa5.34□□□□□ -1.55
LSC1YOR142W ECM31P38122 312 aa5.34□□□□□ -1.55
LSC1YOR142W YDL186WP48568 277 aa5.34□□□□□ -1.55
LSC1YOR142W UBP8P50102 471 aa5.34□□□□□ -1.55
LSC1YOR142W ARO8P53090 500 aaKnown RBP5.34□□□□□ -1.55
LSC1YOR142W CRH1P53301 507 aa5.34□□□□□ -1.55
LSC1YOR142W NGL2Q03264 515 aaKnown RBP5.34□□□□□ -1.55
LSC1YOR142W YER190C-BP0CX94 160 aa5.33□□□□□ -1.56
LSC1YOR142W YEL077W-AP0CX95 160 aa5.33□□□□□ -1.56
LSC1YOR142W YGR296C-BP0CX96 160 aa5.33□□□□□ -1.56
LSC1YOR142W YPL283W-BP0CX97 160 aa5.33□□□□□ -1.56
LSC1YOR142W YPR204C-AP0CX98 160 aa5.33□□□□□ -1.56
LSC1YOR142W YFL068WP0CX99 160 aa5.33□□□□□ -1.56
LSC1YOR142W YLL066W-AP0CY00 160 aa5.33□□□□□ -1.56
LSC1YOR142W YLL067W-AP0CY01 160 aa5.33□□□□□ -1.56
LSC1YOR142W VMA8P32610 256 aaKnown RBP5.33□□□□□ -1.56
LSC1YOR142W PRY2P36110 329 aa5.33□□□□□ -1.56
LSC1YOR142W AGE2P40529 298 aa5.33□□□□□ -1.56
LSC1YOR142W YJL213WP40896 331 aa5.33□□□□□ -1.56
LSC1YOR142W FIP1P45976 327 aa5.33□□□□□ -1.56
LSC1YOR142W RPL9BP51401 191 aaKnown RBP5.33□□□□□ -1.56
LSC1YOR142W YIP1P53039 248 aa5.33□□□□□ -1.56
LSC1YOR142W NIF3P53081 288 aa5.33□□□□□ -1.56
LSC1YOR142W SMX3P54999 86 aaPredicted RBP5.33□□□□□ -1.56
LSC1YOR142W MEH1Q02205 184 aa5.33□□□□□ -1.56
LSC1YOR142W YBR255C-AQ3E776 120 aa5.33□□□□□ -1.56
LSC1YOR142W YCR016WP25617 290 aaKnown RBP5.32□□□□□ -1.56
LSC1YOR142W RAD23P32628 398 aaKnown RBP5.32□□□□□ -1.56
LSC1YOR142W MRPL3P36516 390 aa5.32□□□□□ -1.56
LSC1YOR142W ICS2P38284 255 aa5.32□□□□□ -1.56
LSC1YOR142W YBR242WP38331 238 aa5.32□□□□□ -1.56
LSC1YOR142W YFL054CP43549 646 aa5.32□□□□□ -1.56
LSC1YOR142W GPG1P53130 126 aa5.32□□□□□ -1.56
LSC1YOR142W YML122CQ03207 126 aa5.32□□□□□ -1.56
LSC1YOR142W FEX1Q08913 375 aa5.32□□□□□ -1.56
LSC1YOR142W TPI1P00942 248 aaKnown RBP5.31□□□□□ -1.56
LSC1YOR142W QCR2P07257 368 aa5.31□□□□□ -1.56
LSC1YOR142W MRS4P23500 304 aa5.31□□□□□ -1.56
LSC1YOR142W INO2P26798 304 aa5.31□□□□□ -1.56
LSC1YOR142W NOP16P40007 231 aaKnown RBP5.31□□□□□ -1.56
LSC1YOR142W IRC24P40580 263 aa5.31□□□□□ -1.56
LSC1YOR142W PUS4P48567 403 aaKnown RBP5.31□□□□□ -1.56
LSC1YOR142W SPG4Q04438 115 aa5.31□□□□□ -1.56
LSC1YOR142W HRD1Q08109 551 aa5.31□□□□□ -1.56
LSC1YOR142W ATG5Q12380 294 aa5.31□□□□□ -1.56
LSC1YOR142W TRM13Q12383 476 aa5.31□□□□□ -1.56
LSC1YOR142W LAS17Q12446 633 aa5.31□□□□□ -1.56
LSC1YOR142W VPS63O13549 108 aa5.3□□□□□ -1.56
LSC1YOR142W OLE1P21147 510 aaKnown RBP5.3□□□□□ -1.56
LSC1YOR142W MRP17P28778 131 aa5.3□□□□□ -1.56
LSC1YOR142W LAG1P38703 411 aa5.3□□□□□ -1.56
LSC1YOR142W YHR138CP38841 114 aaPredicted RBP5.3□□□□□ -1.56
LSC1YOR142W BFR1P38934 470 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
LSC1YOR142W GPP2P40106 250 aaKnown RBP5.3□□□□□ -1.56
LSC1YOR142W DFG10P40526 253 aa5.3□□□□□ -1.56
LSC1YOR142W MRPS16Q02608 121 aa5.3□□□□□ -1.56
LSC1YOR142W YGR035W-AQ45U48 73 aa5.3□□□□□ -1.56
LSC1YOR142W HTB1P02293 131 aaKnown RBP5.29□□□□□ -1.56
LSC1YOR142W FEN2P25621 512 aaKnown RBP5.29□□□□□ -1.56
LSC1YOR142W NPL6P32832 435 aa5.29□□□□□ -1.56
LSC1YOR142W ATP3P38077 311 aaKnown RBP5.29□□□□□ -1.56
LSC1YOR142W PHM8P40025 321 aa5.29□□□□□ -1.56
LSC1YOR142W YJL163CP46996 555 aa5.29□□□□□ -1.56
LSC1YOR142W ARP3P47117 449 aaKnown RBP5.29□□□□□ -1.56
LSC1YOR142W FSH2Q05015 223 aa5.29□□□□□ -1.56
LSC1YOR142W YOL029CQ08187 201 aa5.29□□□□□ -1.56
LSC1YOR142W PUT1P09368 476 aa5.28□□□□□ -1.56
LSC1YOR142W NOP1P15646 327 aaKnown RBP5.28□□□□□ -1.56
LSC1YOR142W SRY1P36007 326 aa5.28□□□□□ -1.56
LSC1YOR142W PRS4P38063 326 aaPredicted RBP5.28□□□□□ -1.56
LSC1YOR142W YGR210CP42942 411 aa5.28□□□□□ -1.56
LSC1YOR142W YJR012CP47087 207 aa5.28□□□□□ -1.56
LSC1YOR142W VPS55P47111 140 aa5.28□□□□□ -1.56
LSC1YOR142W VPS28Q02767 242 aa5.28□□□□□ -1.56
LSC1YOR142W NDE2Q07500 545 aa5.28□□□□□ -1.56
LSC1YOR142W YCT1Q12235 531 aa5.28□□□□□ -1.56
LSC1YOR142W YJR112W-AQ3E743 109 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 89.4 ms