RNA–Protein interactions for RNA: YOR039W

CKB2, Transcript of Beta' regulatory subunit of casein kinase 2 (CK2), yeast

Gene CKB2, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKB2	YOR039W	ZRT3	P34240	503 aa		4.09	□□□□□ -1.75
CKB2	YOR039W	CPR5	P35176	225 aa		4.09	□□□□□ -1.75
CKB2	YOR039W	CBT1	P36038	271 aa	Predicted RBP	4.09	□□□□□ -1.75
CKB2	YOR039W	NTC20	P38302	140 aa	Predicted RBP	4.09	□□□□□ -1.75
CKB2	YOR039W	AVT6	P40074	448 aa		4.09	□□□□□ -1.75
CKB2	YOR039W	GIM3	P53900	129 aa		4.09	□□□□□ -1.75
CKB2	YOR039W	RPL21A	Q02753	160 aa	Known RBP	4.09	□□□□□ -1.75
CKB2	YOR039W	ERP1	Q05359	219 aa	Known RBP	4.09	□□□□□ -1.75
CKB2	YOR039W	VAM3	Q12241	283 aa		4.09	□□□□□ -1.75
CKB2	YOR039W	RPL21B	Q12672	160 aa	Known RBP	4.09	□□□□□ -1.75
CKB2	YOR039W	REP2	P03872	296 aa		4.08	□□□□□ -1.76
CKB2	YOR039W	RAD52	P06778	471 aa	Known RBP	4.08	□□□□□ -1.76
CKB2	YOR039W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
CKB2	YOR039W	PET54	P10834	293 aa		4.08	□□□□□ -1.76
CKB2	YOR039W	YCR007C	P25354	239 aa		4.08	□□□□□ -1.76
CKB2	YOR039W	PET18	P25362	215 aa		4.08	□□□□□ -1.76
CKB2	YOR039W	PEX4	P29340	183 aa		4.08	□□□□□ -1.76
CKB2	YOR039W	ERG24	P32462	438 aa	Known RBP	4.08	□□□□□ -1.76
CKB2	YOR039W	GPI14	P47088	403 aa	Known RBP	4.08	□□□□□ -1.76
CKB2	YOR039W	YIP1	P53039	248 aa		4.08	□□□□□ -1.76
CKB2	YOR039W	DOC1	P53068	250 aa		4.08	□□□□□ -1.76
CKB2	YOR039W	HSK3	P69852	69 aa		4.08	□□□□□ -1.76
CKB2	YOR039W	NMA1	Q06178	401 aa	Known RBP	4.08	□□□□□ -1.76
CKB2	YOR039W	NOC4	Q06512	552 aa	Predicted RBP	4.08	□□□□□ -1.76
CKB2	YOR039W	ASR1	Q06834	288 aa		4.08	□□□□□ -1.76
CKB2	YOR039W	MPD1	Q12404	318 aa	Known RBP	4.08	□□□□□ -1.76
CKB2	YOR039W	HIS3	P06633	220 aa		4.07	□□□□□ -1.76
CKB2	YOR039W	TOM40	P23644	387 aa	Known RBP	4.07	□□□□□ -1.76
CKB2	YOR039W	ATG22	P25568	528 aa		4.07	□□□□□ -1.76
CKB2	YOR039W	SRY1	P36007	326 aa		4.07	□□□□□ -1.76
CKB2	YOR039W	YKL075C	P36083	450 aa		4.07	□□□□□ -1.76
CKB2	YOR039W	ADH5	P38113	351 aa	Known RBP	4.07	□□□□□ -1.76
CKB2	YOR039W	BXI1	P48558	297 aa		4.07	□□□□□ -1.76
CKB2	YOR039W	MDM36	Q06820	579 aa		4.07	□□□□□ -1.76
CKB2	YOR039W	DGK1	Q12382	290 aa		4.07	□□□□□ -1.76
CKB2	YOR039W	URA6	P15700	204 aa		4.06	□□□□□ -1.76
CKB2	YOR039W	IFM1	P25038	676 aa		4.06	□□□□□ -1.76
CKB2	YOR039W	ERG3	P32353	365 aa		4.06	□□□□□ -1.76
CKB2	YOR039W	ARO4	P32449	370 aa	Known RBP	4.06	□□□□□ -1.76
CKB2	YOR039W	RAD23	P32628	398 aa	Known RBP	4.06	□□□□□ -1.76
CKB2	YOR039W	PRM5	P40476	318 aa		4.06	□□□□□ -1.76
CKB2	YOR039W	ATG18	P43601	500 aa		4.06	□□□□□ -1.76
CKB2	YOR039W	YJR056C	P47115	236 aa		4.06	□□□□□ -1.76
CKB2	YOR039W	HEM25	Q07534	307 aa		4.06	□□□□□ -1.76
CKB2	YOR039W	YOR029W	Q12243	111 aa		4.06	□□□□□ -1.76
CKB2	YOR039W	ODC2	Q99297	307 aa		4.06	□□□□□ -1.76
CKB2	YOR039W	RPS18A	P0CX55	146 aa	Known RBP	4.05	□□□□□ -1.76
CKB2	YOR039W	RPS18B	P0CX56	146 aa	Predicted RBP	4.05	□□□□□ -1.76
CKB2	YOR039W	FUS3	P16892	353 aa	Known RBP	4.05	□□□□□ -1.76
CKB2	YOR039W	RPL24B	P24000	155 aa	Known RBP	4.05	□□□□□ -1.76
CKB2	YOR039W	DPB2	P24482	689 aa	Predicted RBP	4.05	□□□□□ -1.76
CKB2	YOR039W	VMA5	P31412	392 aa	Known RBP	4.05	□□□□□ -1.76
CKB2	YOR039W	ERG2	P32352	222 aa		4.05	□□□□□ -1.76
CKB2	YOR039W	RIB7	P33312	244 aa		4.05	□□□□□ -1.76
CKB2	YOR039W	YJL218W	P40892	196 aa	Known RBP	4.05	□□□□□ -1.76
CKB2	YOR039W	PAM16	P42949	149 aa		4.05	□□□□□ -1.76
CKB2	YOR039W	SOL1	P50278	321 aa		4.05	□□□□□ -1.76
CKB2	YOR039W	VHT1	P53241	593 aa		4.05	□□□□□ -1.76
CKB2	YOR039W	SLX9	P53251	210 aa	Predicted RBP	4.05	□□□□□ -1.76
CKB2	YOR039W	APJ1	P53940	528 aa		4.05	□□□□□ -1.76
CKB2	YOR039W	FIT1	Q04433	528 aa		4.05	□□□□□ -1.76
CKB2	YOR039W	YPD1	Q07688	167 aa		4.05	□□□□□ -1.76
CKB2	YOR039W	TIR4	Q12218	487 aa	Predicted RBP	4.05	□□□□□ -1.76
CKB2	YOR039W	SUS1	Q6WNK7	96 aa		4.05	□□□□□ -1.76
CKB2	YOR039W	LSB5	P25369	354 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	RPL5	P26321	297 aa	Known RBP	4.04	□□□□□ -1.76
CKB2	YOR039W	HOM6	P31116	359 aa	Known RBP	4.04	□□□□□ -1.76
CKB2	YOR039W	VMA8	P32610	256 aa	Known RBP	4.04	□□□□□ -1.76
CKB2	YOR039W	VAM7	P32912	316 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	YUH1	P35127	236 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	PMU1	P36069	295 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	SWD3	P38123	315 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	FIG1	P38224	298 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	FCY21	P40039	528 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	JLP2	P40206	208 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	YJL213W	P40896	331 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	GWT1	P47026	490 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	FMP48	P53233	369 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	ALG9	P53868	555 aa	Known RBP	4.04	□□□□□ -1.76
CKB2	YOR039W	SPG4	Q04438	115 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	MGR3	Q04472	501 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	YDR286C	Q05530	114 aa		4.04	□□□□□ -1.76
CKB2	YOR039W	ELO2	P25358	347 aa		4.03	□□□□□ -1.76
CKB2	YOR039W	UTP30	P36144	274 aa	Known RBP	4.03	□□□□□ -1.76
CKB2	YOR039W	YHK8	P38776	514 aa		4.03	□□□□□ -1.76
CKB2	YOR039W	RPR2	P40571	144 aa		4.03	□□□□□ -1.76
CKB2	YOR039W	YJR011C	P47086	261 aa	Predicted RBP	4.03	□□□□□ -1.76
CKB2	YOR039W	MEH1	Q02205	184 aa		4.03	□□□□□ -1.76
CKB2	YOR039W	MIX17	Q03667	156 aa		4.03	□□□□□ -1.76
CKB2	YOR039W	YMR166C	Q03829	368 aa		4.03	□□□□□ -1.76
CKB2	YOR039W	LPP1	Q04396	274 aa		4.03	□□□□□ -1.76
CKB2	YOR039W	SCW10	Q04951	389 aa		4.03	□□□□□ -1.76
CKB2	YOR039W	YNG1	Q08465	219 aa		4.03	□□□□□ -1.76
CKB2	YOR039W	RPS8A	P0CX39	200 aa	Known RBP	4.02	□□□□□ -1.77
CKB2	YOR039W	RPS8B	P0CX40	200 aa	Known RBP	4.02	□□□□□ -1.77
CKB2	YOR039W	CKA1	P15790	372 aa		4.02	□□□□□ -1.77
CKB2	YOR039W	BUD23	P25627	275 aa	Predicted RBP	4.02	□□□□□ -1.77
CKB2	YOR039W	OCH1	P31755	480 aa		4.02	□□□□□ -1.77
CKB2	YOR039W	YCR041W	P37265	110 aa		4.02	□□□□□ -1.77
CKB2	YOR039W	PRS4	P38063	326 aa	Predicted RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms