RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	PUT1	P09368	476 aa		7.73	□□□□□ -1.17
MSB4	YOL112W	GRX2	P17695	143 aa	Known RBP	7.73	□□□□□ -1.17
MSB4	YOL112W	YMR31	P19955	123 aa		7.73	□□□□□ -1.17
MSB4	YOL112W	COQ2	P32378	372 aa		7.73	□□□□□ -1.17
MSB4	YOL112W	RPL9B	P51401	191 aa	Known RBP	7.73	□□□□□ -1.17
MSB4	YOL112W	NGL2	Q03264	515 aa	Known RBP	7.73	□□□□□ -1.17
MSB4	YOL112W	HEM13	P11353	328 aa	Known RBP	7.72	□□□□□ -1.17
MSB4	YOL112W	YCR061W	P25639	631 aa		7.72	□□□□□ -1.17
MSB4	YOL112W	SUA5	P32579	426 aa		7.72	□□□□□ -1.17
MSB4	YOL112W	PPQ1	P32945	549 aa		7.72	□□□□□ -1.17
MSB4	YOL112W	BOL3	P39724	118 aa		7.72	□□□□□ -1.17
MSB4	YOL112W	CRH1	P53301	507 aa		7.72	□□□□□ -1.17
MSB4	YOL112W	SCM3	Q12334	223 aa		7.72	□□□□□ -1.17
MSB4	YOL112W	RAX2	Q12465	1220 aa		7.72	□□□□□ -1.17
MSB4	YOL112W	YBR255C-A	Q3E776	120 aa		7.72	□□□□□ -1.17
MSB4	YOL112W	TFB5	Q3E7C1	72 aa	Predicted RBP	7.72	□□□□□ -1.17
MSB4	YOL112W	MRS4	P23500	304 aa		7.71	□□□□□ -1.18
MSB4	YOL112W	WWM1	P43582	211 aa	Known RBP	7.71	□□□□□ -1.18
MSB4	YOL112W	YIP1	P53039	248 aa		7.71	□□□□□ -1.18
MSB4	YOL112W	VPS28	Q02767	242 aa		7.71	□□□□□ -1.18
MSB4	YOL112W	HRD1	Q08109	551 aa		7.71	□□□□□ -1.18
MSB4	YOL112W	YCT1	Q12235	531 aa		7.71	□□□□□ -1.18
MSB4	YOL112W	JID1	Q12350	301 aa		7.71	□□□□□ -1.18
MSB4	YOL112W	ATG5	Q12380	294 aa		7.71	□□□□□ -1.18
MSB4	YOL112W	PHO85	P17157	305 aa		7.7	□□□□□ -1.18
MSB4	YOL112W	SUA7	P29055	345 aa	Predicted RBP	7.7	□□□□□ -1.18
MSB4	YOL112W	YHR138C	P38841	114 aa	Predicted RBP	7.7	□□□□□ -1.18
MSB4	YOL112W	MCH1	Q07376	486 aa		7.7	□□□□□ -1.18
MSB4	YOL112W	YOL029C	Q08187	201 aa		7.7	□□□□□ -1.18
MSB4	YOL112W	YCR041W	P37265	110 aa		7.69	□□□□□ -1.18
MSB4	YOL112W	ECM31	P38122	312 aa		7.69	□□□□□ -1.18
MSB4	YOL112W	ERV15	P38312	142 aa		7.69	□□□□□ -1.18
MSB4	YOL112W	YIR035C	P40579	254 aa		7.69	□□□□□ -1.18
MSB4	YOL112W	VPS63	O13549	108 aa		7.68	□□□□□ -1.18
MSB4	YOL112W	TOM40	P23644	387 aa	Known RBP	7.68	□□□□□ -1.18
MSB4	YOL112W	DAL3	P32459	195 aa		7.68	□□□□□ -1.18
MSB4	YOL112W	YKR045C	P36138	183 aa		7.68	□□□□□ -1.18
MSB4	YOL112W	PRE3	P38624	215 aa		7.68	□□□□□ -1.18
MSB4	YOL112W	YJR012C	P47087	207 aa		7.68	□□□□□ -1.18
MSB4	YOL112W	PUS4	P48567	403 aa	Known RBP	7.68	□□□□□ -1.18
MSB4	YOL112W	TIP1	P27654	210 aa	Predicted RBP	7.68	□□□□□ -1.18
MSB4	YOL112W	RAD23	P32628	398 aa	Known RBP	7.68	□□□□□ -1.18
MSB4	YOL112W	NOP16	P40007	231 aa	Known RBP	7.68	□□□□□ -1.18
MSB4	YOL112W	ARP3	P47117	449 aa	Known RBP	7.68	□□□□□ -1.18
MSB4	YOL112W	PRM4	Q12498	284 aa		7.68	□□□□□ -1.18
MSB4	YOL112W	CKS1	P20486	150 aa	Known RBP	7.67	□□□□□ -1.18
MSB4	YOL112W	SAR1	P20606	190 aa	Known RBP	7.67	□□□□□ -1.18
MSB4	YOL112W	ATP3	P38077	311 aa	Known RBP	7.67	□□□□□ -1.18
MSB4	YOL112W	YPC1	P38298	316 aa		7.67	□□□□□ -1.18
MSB4	YOL112W	LSM12	P38828	187 aa	Known RBP	7.67	□□□□□ -1.18
MSB4	YOL112W	DFG10	P40526	253 aa		7.67	□□□□□ -1.18
MSB4	YOL112W	YJL213W	P40896	331 aa		7.67	□□□□□ -1.18
MSB4	YOL112W	YFL054C	P43549	646 aa		7.67	□□□□□ -1.18
MSB4	YOL112W	FSH2	Q05015	223 aa		7.67	□□□□□ -1.18
MSB4	YOL112W	PAM18	Q07914	168 aa		7.67	□□□□□ -1.18
MSB4	YOL112W	HTB1	P02293	131 aa	Known RBP	7.66	□□□□□ -1.18
MSB4	YOL112W	SRY1	P36007	326 aa		7.66	□□□□□ -1.18
MSB4	YOL112W	RRF1	P38771	230 aa		7.66	□□□□□ -1.18
MSB4	YOL112W	TAX4	P47030	604 aa		7.66	□□□□□ -1.18
MSB4	YOL112W	RRT7	Q07829	113 aa		7.66	□□□□□ -1.18
MSB4	YOL112W	NOP1	P15646	327 aa	Known RBP	7.65	□□□□□ -1.18
MSB4	YOL112W	MSO1	P53604	210 aa	Known RBP	7.65	□□□□□ -1.18
MSB4	YOL112W	YJR112W-A	Q3E743	109 aa		7.65	□□□□□ -1.18
MSB4	YOL112W	HBN1	Q96VH4	193 aa		7.65	□□□□□ -1.18
MSB4	YOL112W	ACB1	P31787	87 aa		7.64	□□□□□ -1.19
MSB4	YOL112W	YNK1	P36010	153 aa	Known RBP	7.64	□□□□□ -1.19
MSB4	YOL112W	PSD1	P39006	500 aa		7.64	□□□□□ -1.19
MSB4	YOL112W	RFC2	P40348	353 aa		7.64	□□□□□ -1.19
MSB4	YOL112W	TIF11	P38912	153 aa	Known RBP	7.63	□□□□□ -1.19
MSB4	YOL112W	YGR050C	P53231	118 aa		7.63	□□□□□ -1.19
MSB4	YOL112W	HED1	Q03937	162 aa		7.63	□□□□□ -1.19
MSB4	YOL112W	NDE2	Q07500	545 aa		7.63	□□□□□ -1.19
MSB4	YOL112W	SEC22	P22214	214 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	ERV1	P27882	189 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	YKL162C	P36052	402 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	PHM8	P40025	321 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	YER137C	P40083	148 aa	Known RBP	7.62	□□□□□ -1.19
MSB4	YOL112W	YIF1	P53845	314 aa	Known RBP	7.62	□□□□□ -1.19
MSB4	YOL112W	YLR224W	Q05947	369 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	COA2	Q3E823	68 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	URA5	P13298	226 aa	Known RBP	7.62	□□□□□ -1.19
MSB4	YOL112W	FEN2	P25621	512 aa	Known RBP	7.62	□□□□□ -1.19
MSB4	YOL112W	YKL102C	P34249	101 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	GPP2	P40106	250 aa	Known RBP	7.62	□□□□□ -1.19
MSB4	YOL112W	YJL163C	P46996	555 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	YJR111C	P47148	283 aa	Known RBP	7.62	□□□□□ -1.19
MSB4	YOL112W	YDL186W	P48568	277 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	YML122C	Q03207	126 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	ATG31	Q12421	196 aa		7.62	□□□□□ -1.19
MSB4	YOL112W	AIM45	Q12480	344 aa	Known RBP	7.62	□□□□□ -1.19
MSB4	YOL112W	GCN3	P14741	305 aa		7.61	□□□□□ -1.19
MSB4	YOL112W	INO2	P26798	304 aa		7.61	□□□□□ -1.19
MSB4	YOL112W	GPI15	P53961	229 aa		7.61	□□□□□ -1.19
MSB4	YOL112W	DYN2	Q02647	92 aa		7.61	□□□□□ -1.19
MSB4	YOL112W	EST3	Q03096	181 aa		7.61	□□□□□ -1.19
MSB4	YOL112W	SPG4	Q04438	115 aa		7.61	□□□□□ -1.19
MSB4	YOL112W	YLR146W-A	Q2V2P1	62 aa		7.61	□□□□□ -1.19
MSB4	YOL112W	SOD1	P00445	154 aa	Known RBP	7.6	□□□□□ -1.19
MSB4	YOL112W	PDC2	P32896	925 aa		7.6	□□□□□ -1.19
MSB4	YOL112W	YBR184W	P38299	523 aa		7.6	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms