RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W GGA1Q06336 557 aa1.99□□□□□ -2.09
HRD3YLR207W NOC4Q06512 552 aaPredicted RBP1.99□□□□□ -2.09
HRD3YLR207W GTT2Q12390 233 aa1.99□□□□□ -2.09
HRD3YLR207W MRX4Q12467 430 aa1.99□□□□□ -2.09
HRD3YLR207W NOT5Q12514 560 aaPredicted RBP1.99□□□□□ -2.09
HRD3YLR207W RPL21BQ12672 160 aaKnown RBP1.99□□□□□ -2.09
HRD3YLR207W YCL021W-AQ96VH3 125 aa1.99□□□□□ -2.09
HRD3YLR207W SAS5Q99314 248 aa1.99□□□□□ -2.09
HRD3YLR207W CDC28P00546 298 aaKnown RBP1.98□□□□□ -2.09
HRD3YLR207W GCN3P14741 305 aa1.98□□□□□ -2.09
HRD3YLR207W CPT1P17898 393 aa1.98□□□□□ -2.09
HRD3YLR207W PHO80P20052 293 aa1.98□□□□□ -2.09
HRD3YLR207W SCL1P21243 252 aaKnown RBP1.98□□□□□ -2.09
HRD3YLR207W RPS1AP33442 255 aaKnown RBP1.98□□□□□ -2.09
HRD3YLR207W YGL260WP53056 76 aa1.98□□□□□ -2.09
HRD3YLR207W YGR018CP53211 109 aa1.98□□□□□ -2.09
HRD3YLR207W INP1Q03694 420 aa1.98□□□□□ -2.09
HRD3YLR207W SPC24Q04477 213 aa1.98□□□□□ -2.09
HRD3YLR207W MIM1Q08176 113 aa1.98□□□□□ -2.09
HRD3YLR207W ERV2Q12284 196 aa1.98□□□□□ -2.09
HRD3YLR207W JID1Q12350 301 aa1.98□□□□□ -2.09
HRD3YLR207W CYR1P08678 2026 aaKnown RBP1.98□□□□□ -2.09
HRD3YLR207W TAH1P25638 111 aaPredicted RBP1.98□□□□□ -2.09
HRD3YLR207W SUI1P32911 108 aaKnown RBP1.98□□□□□ -2.09
HRD3YLR207W MBA1P38300 278 aa1.98□□□□□ -2.09
HRD3YLR207W DER1P38307 211 aa1.98□□□□□ -2.09
HRD3YLR207W YIL012WP40551 113 aa1.98□□□□□ -2.09
HRD3YLR207W SDS23P53172 527 aa1.98□□□□□ -2.09
HRD3YLR207W NRK1P53915 240 aa1.98□□□□□ -2.09
HRD3YLR207W RNH201P53942 307 aa1.98□□□□□ -2.09
HRD3YLR207W YMR317WQ04893 1140 aa1.98□□□□□ -2.09
HRD3YLR207W HRI1Q05905 244 aaKnown RBP1.98□□□□□ -2.09
HRD3YLR207W IRC25Q07951 179 aa1.98□□□□□ -2.09
HRD3YLR207W MDM32Q12171 622 aa1.98□□□□□ -2.09
HRD3YLR207W IZH2Q12442 317 aa1.98□□□□□ -2.09
HRD3YLR207W YOL163WP0CF20 169 aa1.97□□□□□ -2.09
HRD3YLR207W RPS27AP35997 82 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W MRPL28P36527 147 aa1.97□□□□□ -2.09
HRD3YLR207W FRM2P37261 193 aa1.97□□□□□ -2.09
HRD3YLR207W RPS27BP38711 82 aa1.97□□□□□ -2.09
HRD3YLR207W YNL033WP53964 284 aa1.97□□□□□ -2.09
HRD3YLR207W YNL019CP53975 284 aa1.97□□□□□ -2.09
HRD3YLR207W DXO1Q06349 442 aa1.97□□□□□ -2.09
HRD3YLR207W PET20Q99373 253 aa1.97□□□□□ -2.09
HRD3YLR207W SLH1P53327 1967 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W RPL40AP0CH08 128 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W RPL40BP0CH09 128 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W ATG15P25641 520 aa1.97□□□□□ -2.09
HRD3YLR207W CDC39P25655 2108 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W ARO2P28777 376 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W CAT2P32796 670 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W LHP1P33399 275 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W ECM33P38248 429 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W SSH1P38353 490 aaKnown RBP1.97□□□□□ -2.09
HRD3YLR207W GGC1P38988 300 aa1.97□□□□□ -2.09
HRD3YLR207W PRM10P42946 383 aa1.97□□□□□ -2.09
HRD3YLR207W VHS1Q03785 461 aa1.97□□□□□ -2.09
HRD3YLR207W YDR248CQ03786 193 aa1.97□□□□□ -2.09
HRD3YLR207W YDR115WQ04598 105 aa1.97□□□□□ -2.09
HRD3YLR207W IGO2Q9P305 131 aa1.97□□□□□ -2.09
HRD3YLR207W RPS8AP0CX39 200 aaKnown RBP1.96□□□□□ -2.09
HRD3YLR207W RPS8BP0CX40 200 aaKnown RBP1.96□□□□□ -2.09
HRD3YLR207W UBC8P28263 218 aa1.96□□□□□ -2.09
HRD3YLR207W OAC1P32332 324 aa1.96□□□□□ -2.09
HRD3YLR207W OXA1P39952 402 aa1.96□□□□□ -2.09
HRD3YLR207W PDS1P40316 373 aaPredicted RBP1.96□□□□□ -2.09
HRD3YLR207W AYR1P40471 297 aa1.96□□□□□ -2.09
HRD3YLR207W ATG18P43601 500 aa1.96□□□□□ -2.09
HRD3YLR207W FMP48P53233 369 aa1.96□□□□□ -2.09
HRD3YLR207W FMP41P53889 259 aaKnown RBP1.96□□□□□ -2.09
HRD3YLR207W YMR279CQ03263 540 aa1.96□□□□□ -2.09
HRD3YLR207W SDC1Q03323 175 aa1.96□□□□□ -2.09
HRD3YLR207W LIP2Q06005 328 aa1.96□□□□□ -2.09
HRD3YLR207W YBL008W-AQ3E821 79 aa1.96□□□□□ -2.09
HRD3YLR207W PHO2P07269 559 aa1.96□□□□□ -2.1
HRD3YLR207W POP8P38208 133 aa1.96□□□□□ -2.1
HRD3YLR207W ECM34P38728 170 aa1.96□□□□□ -2.1
HRD3YLR207W PTI1P39927 425 aaPredicted RBP1.96□□□□□ -2.1
HRD3YLR207W ILM1P47155 203 aa1.96□□□□□ -2.1
HRD3YLR207W BNS1P50084 137 aa1.96□□□□□ -2.1
HRD3YLR207W ABF2Q02486 183 aa1.96□□□□□ -2.1
HRD3YLR207W RPL21AQ02753 160 aaKnown RBP1.96□□□□□ -2.1
HRD3YLR207W ECM11Q04110 302 aa1.96□□□□□ -2.1
HRD3YLR207W GPI11Q06636 219 aa1.96□□□□□ -2.1
HRD3YLR207W RRG7Q08774 242 aaPredicted RBP1.96□□□□□ -2.1
HRD3YLR207W NSL1Q12143 216 aa1.96□□□□□ -2.1
HRD3YLR207W AGC1Q12482 902 aa1.96□□□□□ -2.1
HRD3YLR207W YER078W-AQ3E7A2 54 aa1.96□□□□□ -2.1
HRD3YLR207W YIL046W-AQ3E7Z4 54 aa1.96□□□□□ -2.1
HRD3YLR207W YBR298C-AQ8TGK4 73 aa1.96□□□□□ -2.1
HRD3YLR207W DPM1P14020 267 aaKnown RBP1.95□□□□□ -2.1
HRD3YLR207W CUP2P15315 225 aa1.95□□□□□ -2.1
HRD3YLR207W ICE2P40499 491 aa1.95□□□□□ -2.1
HRD3YLR207W COS6P53344 381 aa1.95□□□□□ -2.1
HRD3YLR207W MRX11Q03079 207 aa1.95□□□□□ -2.1
HRD3YLR207W LOA1Q06508 300 aa1.95□□□□□ -2.1
HRD3YLR207W YOL019WQ08157 551 aa1.95□□□□□ -2.1
HRD3YLR207W YOL024WQ08172 172 aa1.95□□□□□ -2.1
HRD3YLR207W USB1Q12208 290 aaKnown RBP1.95□□□□□ -2.1
HRD3YLR207W YBR056W-AI2HB52 66 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms