RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C HUG1Q6Q5K6 68 aa8.15□□□□□ -1.1
YSR3YKR053C POP8P38208 133 aa8.14□□□□□ -1.11
YSR3YKR053C LAG1P38703 411 aa8.14□□□□□ -1.11
YSR3YKR053C NRG1Q03125 231 aa8.14□□□□□ -1.11
YSR3YKR053C YOL029CQ08187 201 aa8.14□□□□□ -1.11
YSR3YKR053C JID1Q12350 301 aa8.14□□□□□ -1.11
YSR3YKR053C RNA14P25298 677 aaKnown RBP8.13□□□□□ -1.11
YSR3YKR053C PAN3P36102 679 aaPredicted RBP8.13□□□□□ -1.11
YSR3YKR053C YCP4P25349 247 aaKnown RBP8.12□□□□□ -1.11
YSR3YKR053C INO2P26798 304 aa8.12□□□□□ -1.11
YSR3YKR053C YHR138CP38841 114 aaPredicted RBP8.12□□□□□ -1.11
YSR3YKR053C MSE1P48525 536 aa8.12□□□□□ -1.11
YSR3YKR053C CAB5Q03941 241 aa8.12□□□□□ -1.11
YSR3YKR053C THI74Q04083 370 aa8.12□□□□□ -1.11
YSR3YKR053C VPS63O13549 108 aa8.11□□□□□ -1.11
YSR3YKR053C PRS4P38063 326 aaPredicted RBP8.11□□□□□ -1.11
YSR3YKR053C AGE2P40529 298 aa8.11□□□□□ -1.11
YSR3YKR053C RTT103Q05543 409 aa8.11□□□□□ -1.11
YSR3YKR053C YDL086WQ07505 273 aa8.11□□□□□ -1.11
YSR3YKR053C DYN1P36022 4092 aa8.1□□□□□ -1.11
YSR3YKR053C COS8P38723 381 aa8.1□□□□□ -1.11
YSR3YKR053C PHM8P40025 321 aa8.1□□□□□ -1.11
YSR3YKR053C IRC24P40580 263 aa8.1□□□□□ -1.11
YSR3YKR053C MCH1Q07376 486 aa8.1□□□□□ -1.11
YSR3YKR053C RDI1Q12434 202 aa8.1□□□□□ -1.11
YSR3YKR053C NHP6BP11633 99 aaKnown RBP8.09□□□□□ -1.11
YSR3YKR053C YKL075CP36083 450 aa8.09□□□□□ -1.11
YSR3YKR053C MRPL3P36516 390 aa8.09□□□□□ -1.11
YSR3YKR053C GPG1P53130 126 aa8.09□□□□□ -1.11
YSR3YKR053C YNG1Q08465 219 aa8.09□□□□□ -1.11
YSR3YKR053C HBN1Q96VH4 193 aa8.09□□□□□ -1.11
YSR3YKR053C QCR2P07257 368 aa8.08□□□□□ -1.12
YSR3YKR053C SPS2P08459 502 aa8.08□□□□□ -1.12
YSR3YKR053C YCR016WP25617 290 aaKnown RBP8.08□□□□□ -1.12
YSR3YKR053C WWM1P43582 211 aaKnown RBP8.08□□□□□ -1.12
YSR3YKR053C FIP1P45976 327 aa8.08□□□□□ -1.12
YSR3YKR053C YJL163CP46996 555 aa8.08□□□□□ -1.12
YSR3YKR053C ARO8P53090 500 aaKnown RBP8.08□□□□□ -1.12
YSR3YKR053C PEX10Q05568 337 aa8.08□□□□□ -1.12
YSR3YKR053C AEP3Q12089 606 aa8.08□□□□□ -1.12
YSR3YKR053C TRM13Q12383 476 aa8.08□□□□□ -1.12
YSR3YKR053C HTB1P02293 131 aaKnown RBP8.07□□□□□ -1.12
YSR3YKR053C YJL213WP40896 331 aa8.07□□□□□ -1.12
YSR3YKR053C VPS55P47111 140 aa8.07□□□□□ -1.12
YSR3YKR053C UBP8P50102 471 aa8.07□□□□□ -1.12
YSR3YKR053C NIF3P53081 288 aa8.07□□□□□ -1.12
YSR3YKR053C HOR7Q05827 59 aa8.07□□□□□ -1.12
YSR3YKR053C MRPL23Q12487 163 aaPredicted RBP8.07□□□□□ -1.12
YSR3YKR053C OLE1P21147 510 aaKnown RBP8.06□□□□□ -1.12
YSR3YKR053C YKR045CP36138 183 aa8.06□□□□□ -1.12
YSR3YKR053C GEP4P38812 185 aa8.06□□□□□ -1.12
YSR3YKR053C GPP2P40106 250 aaKnown RBP8.06□□□□□ -1.12
YSR3YKR053C YKE4P40544 346 aa8.06□□□□□ -1.12
YSR3YKR053C PAM18Q07914 168 aa8.06□□□□□ -1.12
YSR3YKR053C ATG31Q12421 196 aa8.06□□□□□ -1.12
YSR3YKR053C MSN1P22148 382 aa8.05□□□□□ -1.12
YSR3YKR053C RPA43P46669 326 aa8.05□□□□□ -1.12
YSR3YKR053C LAS17Q12446 633 aa8.05□□□□□ -1.12
YSR3YKR053C ATP3P38077 311 aaKnown RBP8.04□□□□□ -1.12
YSR3YKR053C ERV15P38312 142 aa8.04□□□□□ -1.12
YSR3YKR053C YBR242WP38331 238 aa8.04□□□□□ -1.12
YSR3YKR053C LSM12P38828 187 aaKnown RBP8.04□□□□□ -1.12
YSR3YKR053C RFC2P40348 353 aa8.04□□□□□ -1.12
YSR3YKR053C NDE2Q07500 545 aa8.04□□□□□ -1.12
YSR3YKR053C ENV7Q12003 364 aa8.04□□□□□ -1.12
YSR3YKR053C RKI1Q12189 258 aa8.04□□□□□ -1.12
YSR3YKR053C YCT1Q12235 531 aa8.04□□□□□ -1.12
YSR3YKR053C NOP1P15646 327 aaKnown RBP8.03□□□□□ -1.12
YSR3YKR053C SUA5P32579 426 aa8.03□□□□□ -1.12
YSR3YKR053C BFR1P38934 470 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
YSR3YKR053C ARP3P47117 449 aaKnown RBP8.03□□□□□ -1.12
YSR3YKR053C ERG25P53045 309 aa8.03□□□□□ -1.12
YSR3YKR053C MRPS16Q02608 121 aa8.03□□□□□ -1.12
YSR3YKR053C FSH2Q05015 223 aa8.03□□□□□ -1.12
YSR3YKR053C MRP17P28778 131 aa8.02□□□□□ -1.13
YSR3YKR053C RPD3P32561 433 aa8.02□□□□□ -1.13
YSR3YKR053C GLY1P37303 387 aaKnown RBP8.02□□□□□ -1.13
YSR3YKR053C SSU72P53538 206 aaPredicted RBP8.02□□□□□ -1.13
YSR3YKR053C YML122CQ03207 126 aa8.02□□□□□ -1.13
YSR3YKR053C YBR255C-AQ3E776 120 aa8.02□□□□□ -1.13
YSR3YKR053C ARG80P07249 177 aa8.01□□□□□ -1.13
YSR3YKR053C PUT1P09368 476 aa8.01□□□□□ -1.13
YSR3YKR053C CRH1P53301 507 aa8.01□□□□□ -1.13
YSR3YKR053C HED1Q03937 162 aa8.01□□□□□ -1.13
YSR3YKR053C YGL258W-AQ3E740 77 aa8.01□□□□□ -1.13
YSR3YKR053C YJR112W-AQ3E743 109 aa8.01□□□□□ -1.13
YSR3YKR053C TRP4P07285 380 aaPredicted RBP8□□□□□ -1.13
YSR3YKR053C STF2P16965 84 aa8□□□□□ -1.13
YSR3YKR053C YPC1P38298 316 aa8□□□□□ -1.13
YSR3YKR053C LST8P41318 303 aa8□□□□□ -1.13
YSR3YKR053C YJR012CP47087 207 aa8□□□□□ -1.13
YSR3YKR053C COX18P53239 316 aa8□□□□□ -1.13
YSR3YKR053C PRM3Q08931 133 aa8□□□□□ -1.13
YSR3YKR053C FEX2Q08991 375 aa8□□□□□ -1.13
YSR3YKR053C RAD28Q12021 506 aa8□□□□□ -1.13
YSR3YKR053C ATG5Q12380 294 aa8□□□□□ -1.13
YSR3YKR053C TFB5Q3E7C1 72 aaPredicted RBP8□□□□□ -1.13
YSR3YKR053C TPI1P00942 248 aaKnown RBP7.99□□□□□ -1.13
YSR3YKR053C MIG1P27705 504 aa7.99□□□□□ -1.13
YSR3YKR053C COX15P40086 486 aa7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 100.3 ms