RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W GTR2P53290 341 aa1.9□□□□□ -2.11
SNU114YKL173W DID2P69771 204 aa1.9□□□□□ -2.11
SNU114YKL173W SAE3P89114 91 aa1.9□□□□□ -2.11
SNU114YKL173W UBC7Q02159 165 aa1.9□□□□□ -2.11
SNU114YKL173W YET2Q04210 160 aa1.9□□□□□ -2.11
SNU114YKL173W RRP40Q08285 240 aaKnown RBP1.9□□□□□ -2.11
SNU114YKL173W YPL245WQ12179 454 aaKnown RBP1.9□□□□□ -2.11
SNU114YKL173W RFM1Q12192 310 aa1.9□□□□□ -2.11
SNU114YKL173W YBL112CQ3E7Y4 105 aa1.9□□□□□ -2.11
SNU114YKL173W YOL085CQ99345 113 aa1.9□□□□□ -2.11
SNU114YKL173W SEC4P07560 215 aaKnown RBP1.89□□□□□ -2.11
SNU114YKL173W PRE7P23724 241 aaKnown RBP1.89□□□□□ -2.11
SNU114YKL173W LDS1P31379 325 aa1.89□□□□□ -2.11
SNU114YKL173W HYM1P32464 399 aa1.89□□□□□ -2.11
SNU114YKL173W COS8P38723 381 aa1.89□□□□□ -2.11
SNU114YKL173W TIM17P39515 158 aa1.89□□□□□ -2.11
SNU114YKL173W MIG3P39943 394 aa1.89□□□□□ -2.11
SNU114YKL173W YIA6P40556 373 aa1.89□□□□□ -2.11
SNU114YKL173W ORM1P53224 222 aa1.89□□□□□ -2.11
SNU114YKL173W CLD1P53264 445 aa1.89□□□□□ -2.11
SNU114YKL173W ASI3P53983 676 aa1.89□□□□□ -2.11
SNU114YKL173W YDR209CQ03480 137 aa1.89□□□□□ -2.11
SNU114YKL173W HNT1Q04344 158 aaKnown RBP1.89□□□□□ -2.11
SNU114YKL173W YOR214CQ12282 236 aa1.89□□□□□ -2.11
SNU114YKL173W MRX4Q12467 430 aa1.89□□□□□ -2.11
SNU114YKL173W RPL28P02406 149 aaKnown RBP1.89□□□□□ -2.11
SNU114YKL173W SPT15P13393 240 aaKnown RBP1.89□□□□□ -2.11
SNU114YKL173W MRPS28P21771 286 aa1.89□□□□□ -2.11
SNU114YKL173W MRP49P32388 137 aa1.89□□□□□ -2.11
SNU114YKL173W DRE2P36152 348 aa1.89□□□□□ -2.11
SNU114YKL173W YHL044WP38727 235 aa1.89□□□□□ -2.11
SNU114YKL173W PTH1P38876 190 aaKnown RBP1.89□□□□□ -2.11
SNU114YKL173W LSM4P40070 187 aaKnown RBP1.89□□□□□ -2.11
SNU114YKL173W TAF9Q05027 157 aa1.89□□□□□ -2.11
SNU114YKL173W SEI1Q06058 285 aa1.89□□□□□ -2.11
SNU114YKL173W NKP2Q06162 153 aa1.89□□□□□ -2.11
SNU114YKL173W MSA1Q08471 629 aa1.89□□□□□ -2.11
SNU114YKL173W HTZ1Q12692 134 aaKnown RBP1.89□□□□□ -2.11
SNU114YKL173W HHF1P02309 103 aaKnown RBP1.88□□□□□ -2.11
SNU114YKL173W ERD2P18414 219 aa1.88□□□□□ -2.11
SNU114YKL173W TAH1P25638 111 aaPredicted RBP1.88□□□□□ -2.11
SNU114YKL173W YCR090CP25654 182 aaKnown RBP1.88□□□□□ -2.11
SNU114YKL173W SFK1P35735 353 aa1.88□□□□□ -2.11
SNU114YKL173W SWD3P38123 315 aa1.88□□□□□ -2.11
SNU114YKL173W YNL208WP40159 199 aaKnown RBP1.88□□□□□ -2.11
SNU114YKL173W UFD1P53044 361 aa1.88□□□□□ -2.11
SNU114YKL173W YNL184CP53876 108 aa1.88□□□□□ -2.11
SNU114YKL173W PAL1Q05518 499 aaKnown RBP1.88□□□□□ -2.11
SNU114YKL173W HRI1Q05905 244 aaKnown RBP1.88□□□□□ -2.11
SNU114YKL173W ECM19Q06011 112 aa1.88□□□□□ -2.11
SNU114YKL173W YPR098CQ06089 161 aa1.88□□□□□ -2.11
SNU114YKL173W YOL024WQ08172 172 aa1.88□□□□□ -2.11
SNU114YKL173W PDR18P53756 1333 aa1.88□□□□□ -2.11
SNU114YKL173W GCN3P14741 305 aa1.88□□□□□ -2.11
SNU114YKL173W FCY2P17064 533 aa1.88□□□□□ -2.11
SNU114YKL173W EPT1P22140 391 aa1.88□□□□□ -2.11
SNU114YKL173W SEC22P22214 214 aa1.88□□□□□ -2.11
SNU114YKL173W RPB9P27999 122 aa1.88□□□□□ -2.11
SNU114YKL173W POP4P38336 279 aa1.88□□□□□ -2.11
SNU114YKL173W KRE29P40026 464 aa1.88□□□□□ -2.11
SNU114YKL173W RFC2P40348 353 aa1.88□□□□□ -2.11
SNU114YKL173W YFL064CP43540 174 aa1.88□□□□□ -2.11
SNU114YKL173W RPA43P46669 326 aa1.88□□□□□ -2.11
SNU114YKL173W NRM1P53718 249 aa1.88□□□□□ -2.11
SNU114YKL173W YPR202WQ08993 238 aa1.88□□□□□ -2.11
SNU114YKL173W YLR126CQ12288 251 aa1.88□□□□□ -2.11
SNU114YKL173W YLR099W-AQ3E798 87 aa1.88□□□□□ -2.11
SNU114YKL173W UBI4P0CG63 381 aaKnown RBP1.88□□□□□ -2.11
SNU114YKL173W OCH1P31755 480 aa1.88□□□□□ -2.11
SNU114YKL173W ALK2P32789 676 aaPredicted RBP1.88□□□□□ -2.11
SNU114YKL173W YBL059WP34224 193 aa1.88□□□□□ -2.11
SNU114YKL173W SMP1P38128 452 aa1.88□□□□□ -2.11
SNU114YKL173W POP8P38208 133 aa1.88□□□□□ -2.11
SNU114YKL173W TRR2P38816 342 aa1.88□□□□□ -2.11
SNU114YKL173W VMA7P39111 118 aa1.88□□□□□ -2.11
SNU114YKL173W AIM2P39721 246 aa1.88□□□□□ -2.11
SNU114YKL173W STB1P42845 420 aa1.88□□□□□ -2.11
SNU114YKL173W EAF6P47128 113 aa1.88□□□□□ -2.11
SNU114YKL173W FLC3P53121 802 aa1.88□□□□□ -2.11
SNU114YKL173W DAD3P69850 94 aa1.88□□□□□ -2.11
SNU114YKL173W GPI17Q04080 534 aa1.88□□□□□ -2.11
SNU114YKL173W YPL257WQ08974 193 aa1.88□□□□□ -2.11
SNU114YKL173W ATP14Q12349 124 aa1.88□□□□□ -2.11
SNU114YKL173W SIR4P11978 1358 aa1.87□□□□□ -2.11
SNU114YKL173W YKR104WP0CE69 306 aa1.87□□□□□ -2.11
SNU114YKL173W SCO1P23833 295 aa1.87□□□□□ -2.11
SNU114YKL173W PCL1P24867 279 aa1.87□□□□□ -2.11
SNU114YKL173W MRPL3P36516 390 aa1.87□□□□□ -2.11
SNU114YKL173W YBR285WP38354 144 aa1.87□□□□□ -2.11
SNU114YKL173W YMR144WP40214 342 aaKnown RBP1.87□□□□□ -2.11
SNU114YKL173W FMP48P53233 369 aa1.87□□□□□ -2.11
SNU114YKL173W SCP1Q08873 200 aa1.87□□□□□ -2.11
SNU114YKL173W HRT3Q12347 344 aa1.87□□□□□ -2.11
SNU114YKL173W RPL21BQ12672 160 aaKnown RBP1.87□□□□□ -2.11
SNU114YKL173W PPH21P23594 369 aa1.87□□□□□ -2.11
SNU114YKL173W AHC2P25649 128 aa1.87□□□□□ -2.11
SNU114YKL173W PDS1P40316 373 aaPredicted RBP1.87□□□□□ -2.11
SNU114YKL173W SER2P42941 309 aa1.87□□□□□ -2.11
SNU114YKL173W ERJ5P43613 295 aaPredicted RBP1.87□□□□□ -2.11
SNU114YKL173W YGR017WP53210 297 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms