RNA–Protein interactions for RNA: YKL135C

APL2, Transcript of Beta-adaptin subunit of the clathrin-associated protein (AP-1) complex, yeast

Gene APL2, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL2	YKL135C	SSH1	P38353	490 aa	Known RBP	0.92	□□□□□ -2.26
APL2	YKL135C	TEM1	P38987	245 aa		0.92	□□□□□ -2.26
APL2	YKL135C	DDI1	P40087	428 aa		0.92	□□□□□ -2.26
APL2	YKL135C	FIP1	P45976	327 aa		0.92	□□□□□ -2.26
APL2	YKL135C	RPA43	P46669	326 aa		0.92	□□□□□ -2.26
APL2	YKL135C	SIP18	P50263	79 aa		0.92	□□□□□ -2.26
APL2	YKL135C	MAL13	P53338	473 aa		0.92	□□□□□ -2.26
APL2	YKL135C	SLM2	P53955	656 aa		0.92	□□□□□ -2.26
APL2	YKL135C	YMR279C	Q03263	540 aa		0.92	□□□□□ -2.26
APL2	YKL135C	COX20	Q04935	205 aa		0.92	□□□□□ -2.26
APL2	YKL135C	YLR179C	Q06252	201 aa	Known RBP	0.92	□□□□□ -2.26
APL2	YKL135C	CTS2	Q06350	511 aa		0.92	□□□□□ -2.26
APL2	YKL135C	YPR172W	Q06608	200 aa		0.92	□□□□□ -2.26
APL2	YKL135C	PRP11	Q07350	266 aa	Predicted RBP	0.92	□□□□□ -2.26
APL2	YKL135C	AGC1	Q12482	902 aa		0.92	□□□□□ -2.26
APL2	YKL135C	YBL008W-A	Q3E821	79 aa		0.92	□□□□□ -2.26
APL2	YKL135C	RHO1	P06780	209 aa	Known RBP	0.91	□□□□□ -2.26
APL2	YKL135C	RSR1	P13856	272 aa		0.91	□□□□□ -2.26
APL2	YKL135C	PBN1	P25580	416 aa		0.91	□□□□□ -2.26
APL2	YKL135C	RIB7	P33312	244 aa		0.91	□□□□□ -2.26
APL2	YKL135C	PRM10	P42946	383 aa		0.91	□□□□□ -2.26
APL2	YKL135C	AGX1	P43567	385 aa		0.91	□□□□□ -2.26
APL2	YKL135C	YMR114C	Q04471	368 aa	Known RBP	0.91	□□□□□ -2.26
APL2	YKL135C	SME1	Q12330	94 aa	Predicted RBP	0.91	□□□□□ -2.26
APL2	YKL135C	RPL22A	P05749	121 aa	Known RBP	0.91	□□□□□ -2.26
APL2	YKL135C	TOM40	P23644	387 aa	Known RBP	0.91	□□□□□ -2.26
APL2	YKL135C	QRI5	P32344	111 aa		0.91	□□□□□ -2.26
APL2	YKL135C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
APL2	YKL135C	VPS51	P36116	164 aa		0.91	□□□□□ -2.26
APL2	YKL135C	YJR146W	P47174	117 aa		0.91	□□□□□ -2.26
APL2	YKL135C	AAH1	P53909	347 aa		0.91	□□□□□ -2.26
APL2	YKL135C	RCE1	Q03530	315 aa		0.91	□□□□□ -2.26
APL2	YKL135C	PSF1	Q12488	208 aa		0.91	□□□□□ -2.26
APL2	YKL135C	YPL247C	Q12523	523 aa		0.91	□□□□□ -2.26
APL2	YKL135C	DPM1	P14020	267 aa	Known RBP	0.9	□□□□□ -2.26
APL2	YKL135C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.9	□□□□□ -2.26	not detected
APL2	YKL135C	PET9	P18239	318 aa	Known RBP	0.9	□□□□□ -2.26
APL2	YKL135C	SCO1	P23833	295 aa		0.9	□□□□□ -2.26
APL2	YKL135C	EHD3	P28817	500 aa		0.9	□□□□□ -2.26
APL2	YKL135C	CLB6	P32943	380 aa		0.9	□□□□□ -2.26
APL2	YKL135C	YOR268C	Q08734	132 aa		0.9	□□□□□ -2.26
APL2	YKL135C	SMT3	Q12306	101 aa	Known RBP	0.9	□□□□□ -2.26
APL2	YKL135C	BBP1	Q12365	385 aa		0.9	□□□□□ -2.26
APL2	YKL135C	RAS2	P01120	322 aa	Known RBP	0.9	□□□□□ -2.27
APL2	YKL135C	RPL26A	P05743	127 aa	Known RBP	0.9	□□□□□ -2.27
APL2	YKL135C	COS2	P0CX12	379 aa		0.9	□□□□□ -2.27
APL2	YKL135C	COS3	P0CX13	379 aa		0.9	□□□□□ -2.27
APL2	YKL135C	RPL35A	P0CX84	120 aa	Known RBP	0.9	□□□□□ -2.27
APL2	YKL135C	RPL35B	P0CX85	120 aa	Known RBP	0.9	□□□□□ -2.27
APL2	YKL135C	NSP1	P14907	823 aa	Known RBP	0.9	□□□□□ -2.27
APL2	YKL135C	SUA7	P29055	345 aa	Predicted RBP	0.9	□□□□□ -2.27
APL2	YKL135C	GDH2	P33327	1092 aa	Known RBP	0.9	□□□□□ -2.27
APL2	YKL135C	RPL26B	P53221	127 aa	Known RBP	0.9	□□□□□ -2.27
APL2	YKL135C	ASI3	P53983	676 aa		0.9	□□□□□ -2.27
APL2	YKL135C	NCE101	Q02820	53 aa		0.9	□□□□□ -2.27
APL2	YKL135C	NOT5	Q12514	560 aa	Predicted RBP	0.9	□□□□□ -2.27
APL2	YKL135C	SAS5	Q99314	248 aa		0.9	□□□□□ -2.27
APL2	YKL135C	TRX3	P25372	127 aa		0.89	□□□□□ -2.27
APL2	YKL135C	JEN1	P36035	616 aa		0.89	□□□□□ -2.27
APL2	YKL135C	PRS2	P38620	318 aa	Known RBP	0.89	□□□□□ -2.27
APL2	YKL135C	NSG1	P38837	291 aa		0.89	□□□□□ -2.27
APL2	YKL135C	YIL001W	P40560	513 aa		0.89	□□□□□ -2.27
APL2	YKL135C	YJL016W	P47072	561 aa		0.89	□□□□□ -2.27
APL2	YKL135C	GOT1	Q03554	138 aa		0.89	□□□□□ -2.27
APL2	YKL135C	ATG17	Q06410	417 aa		0.89	□□□□□ -2.27
APL2	YKL135C	RRS1	Q08746	203 aa	Known RBP	0.89	□□□□□ -2.27
APL2	YKL135C	TIM9	O74700	87 aa		0.89	□□□□□ -2.27
APL2	YKL135C	COX2	P00410	251 aa		0.89	□□□□□ -2.27
APL2	YKL135C	PRX1	P34227	261 aa	Known RBP	0.89	□□□□□ -2.27
APL2	YKL135C	RCN1	P36054	211 aa		0.89	□□□□□ -2.27
APL2	YKL135C	BIG1	P38813	335 aa		0.89	□□□□□ -2.27
APL2	YKL135C	SOL1	P50278	321 aa		0.89	□□□□□ -2.27
APL2	YKL135C	YNR064C	P53750	290 aa		0.89	□□□□□ -2.27
APL2	YKL135C	YDR124W	Q04608	324 aa		0.89	□□□□□ -2.27
APL2	YKL135C	RRP36	Q12481	300 aa	Predicted RBP	0.89	□□□□□ -2.27
APL2	YKL135C	MHT1	Q12525	324 aa		0.89	□□□□□ -2.27
APL2	YKL135C	MHF1	Q3E835	90 aa		0.89	□□□□□ -2.27
APL2	YKL135C	YHR212W-A	P0CX91	67 aa		0.88	□□□□□ -2.27
APL2	YKL135C	SEC22	P22214	214 aa		0.88	□□□□□ -2.27
APL2	YKL135C	ROX3	P25046	220 aa		0.88	□□□□□ -2.27
APL2	YKL135C	YUH1	P35127	236 aa		0.88	□□□□□ -2.27
APL2	YKL135C	CTR2	P38865	189 aa		0.88	□□□□□ -2.27
APL2	YKL135C	PET100	P38958	111 aa		0.88	□□□□□ -2.27
APL2	YKL135C	COG3	P40094	801 aa		0.88	□□□□□ -2.27
APL2	YKL135C	YFR035C	P43608	114 aa		0.88	□□□□□ -2.27
APL2	YKL135C	YFR054C	P43622	192 aa		0.88	□□□□□ -2.27
APL2	YKL135C	DAN1	P47178	298 aa		0.88	□□□□□ -2.27
APL2	YKL135C	GEP7	P53171	287 aa		0.88	□□□□□ -2.27
APL2	YKL135C	PET191	Q02772	108 aa		0.88	□□□□□ -2.27
APL2	YKL135C	PEX12	Q04370	399 aa		0.88	□□□□□ -2.27
APL2	YKL135C	YPR098C	Q06089	161 aa		0.88	□□□□□ -2.27
APL2	YKL135C	FIT3	Q08907	204 aa		0.88	□□□□□ -2.27
APL2	YKL135C	YOR283W	Q12040	230 aa	Known RBP	0.88	□□□□□ -2.27
APL2	YKL135C	YHR086W-A	Q3E746	53 aa		0.88	□□□□□ -2.27
APL2	YKL135C	BNA6	P43619	295 aa		0.87	□□□□□ -2.27
APL2	YKL135C	OST2	P46964	130 aa		0.87	□□□□□ -2.27
APL2	YKL135C	SNX4	P47057	423 aa		0.87	□□□□□ -2.27
APL2	YKL135C	USE1	P53146	245 aa		0.87	□□□□□ -2.27
APL2	YKL135C	COS6	P53344	381 aa		0.87	□□□□□ -2.27
APL2	YKL135C	USB1	Q12208	290 aa	Known RBP	0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms