RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W RTC4P53850 401 aa1.72□□□□□ -2.13
CAP1YKL007W GIM3P53900 129 aa1.72□□□□□ -2.13
CAP1YKL007W SSQ1Q05931 657 aaPredicted RBP1.72□□□□□ -2.13
CAP1YKL007W GET4Q12125 312 aa1.72□□□□□ -2.13
CAP1YKL007W TPO4Q12256 659 aa1.72□□□□□ -2.13
CAP1YKL007W JLP1Q12358 412 aa1.72□□□□□ -2.13
CAP1YKL007W LSO2Q3E772 92 aaKnown RBP1.72□□□□□ -2.13
CAP1YKL007W IPP1P00817 287 aaKnown RBP1.71□□□□□ -2.14
CAP1YKL007W URA6P15700 204 aa1.71□□□□□ -2.14
CAP1YKL007W SEC14P24280 304 aaKnown RBP1.71□□□□□ -2.14
CAP1YKL007W IDH1P28834 360 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
CAP1YKL007W CBT1P36038 271 aaPredicted RBP1.71□□□□□ -2.14
CAP1YKL007W PHO88P38264 188 aaPredicted RBP1.71□□□□□ -2.14
CAP1YKL007W RIO2P40160 425 aaKnown RBP1.71□□□□□ -2.14
CAP1YKL007W YNL194CP40169 301 aa1.71□□□□□ -2.14
CAP1YKL007W AYR1P40471 297 aa1.71□□□□□ -2.14
CAP1YKL007W IRC18P47056 224 aa1.71□□□□□ -2.14
CAP1YKL007W YJR149WP47177 404 aa1.71□□□□□ -2.14
CAP1YKL007W MGA1P53050 456 aa1.71□□□□□ -2.14
CAP1YKL007W CUS2P53830 285 aaPredicted RBP1.71□□□□□ -2.14
CAP1YKL007W DID2P69771 204 aa1.71□□□□□ -2.14
CAP1YKL007W ABF2Q02486 183 aa1.71□□□□□ -2.14
CAP1YKL007W ARO80Q04052 950 aa1.71□□□□□ -2.14
CAP1YKL007W ATG38Q05789 226 aaKnown RBP1.71□□□□□ -2.14
CAP1YKL007W YPR172WQ06608 200 aa1.71□□□□□ -2.14
CAP1YKL007W YPL225WQ08971 146 aaKnown RBP1.71□□□□□ -2.14
CAP1YKL007W YPL257WQ08974 193 aa1.71□□□□□ -2.14
CAP1YKL007W DAS2Q12084 232 aa1.71□□□□□ -2.14
CAP1YKL007W RIF1P29539 1916 aa1.7□□□□□ -2.14
CAP1YKL007W SEC22P22214 214 aa1.7□□□□□ -2.14
CAP1YKL007W RCN1P36054 211 aa1.7□□□□□ -2.14
CAP1YKL007W YBR032WP38223 100 aa1.7□□□□□ -2.14
CAP1YKL007W SMX2P40204 77 aaKnown RBP1.7□□□□□ -2.14
CAP1YKL007W FIS1P40515 155 aa1.7□□□□□ -2.14
CAP1YKL007W CWC23P52868 283 aaPredicted RBP1.7□□□□□ -2.14
CAP1YKL007W YGL034CP53186 121 aa1.7□□□□□ -2.14
CAP1YKL007W RSM10Q03201 203 aa1.7□□□□□ -2.14
CAP1YKL007W YMR279CQ03263 540 aa1.7□□□□□ -2.14
CAP1YKL007W ABP140Q08641 628 aaKnown RBP1.7□□□□□ -2.14
CAP1YKL007W YRA1Q12159 226 aaKnown RBP1.7□□□□□ -2.14
CAP1YKL007W YPR011CQ12251 326 aa1.7□□□□□ -2.14
CAP1YKL007W YOR020W-AQ3E824 90 aa1.7□□□□□ -2.14
CAP1YKL007W HTL1Q9URQ5 78 aa1.7□□□□□ -2.14
CAP1YKL007W RPL27AP0C2H6 136 aaKnown RBP1.69□□□□□ -2.14
CAP1YKL007W RPL27BP0C2H7 136 aaKnown RBP1.69□□□□□ -2.14
CAP1YKL007W CBF1P17106 351 aa1.69□□□□□ -2.14
CAP1YKL007W ERG24P32462 438 aaKnown RBP1.69□□□□□ -2.14
CAP1YKL007W IKI1P38874 309 aa1.69□□□□□ -2.14
CAP1YKL007W ARC15P40518 154 aaRIP-Chip data1.69□□□□□ -2.14not detected
CAP1YKL007W FAR7P43592 221 aa1.69□□□□□ -2.14
CAP1YKL007W ADO1P47143 340 aaKnown RBP1.69□□□□□ -2.14
CAP1YKL007W GET1P53192 235 aa1.69□□□□□ -2.14
CAP1YKL007W GTR2P53290 341 aa1.69□□□□□ -2.14
CAP1YKL007W TIM8P57744 87 aa1.69□□□□□ -2.14
CAP1YKL007W YMD8Q03697 442 aa1.69□□□□□ -2.14
CAP1YKL007W YML096WQ04489 525 aa1.69□□□□□ -2.14
CAP1YKL007W YMR321CQ04898 105 aa1.69□□□□□ -2.14
CAP1YKL007W HTB1P02293 131 aaKnown RBP1.68□□□□□ -2.14
CAP1YKL007W HTB2P02294 131 aa1.68□□□□□ -2.14
CAP1YKL007W MRPS28P21771 286 aa1.68□□□□□ -2.14
CAP1YKL007W MGM101P32787 269 aaKnown RBP1.68□□□□□ -2.14
CAP1YKL007W YPT52P36018 234 aaKnown RBP1.68□□□□□ -2.14
CAP1YKL007W LSM4P40070 187 aaKnown RBP1.68□□□□□ -2.14
CAP1YKL007W PEX17P40155 199 aa1.68□□□□□ -2.14
CAP1YKL007W YRB2P40517 327 aa1.68□□□□□ -2.14
CAP1YKL007W CAT5P41735 233 aa1.68□□□□□ -2.14
CAP1YKL007W TMA22P47089 198 aaPredicted RBP1.68□□□□□ -2.14
CAP1YKL007W YJR056CP47115 236 aa1.68□□□□□ -2.14
CAP1YKL007W BXI1P48558 297 aa1.68□□□□□ -2.14
CAP1YKL007W YGL159WP53110 370 aa1.68□□□□□ -2.14
CAP1YKL007W TOS8P53147 276 aa1.68□□□□□ -2.14
CAP1YKL007W PRM8P53174 237 aa1.68□□□□□ -2.14
CAP1YKL007W ALG13P53178 202 aa1.68□□□□□ -2.14
CAP1YKL007W YGR026WP53217 278 aa1.68□□□□□ -2.14
CAP1YKL007W YNL247WP53852 767 aaKnown RBP1.68□□□□□ -2.14
CAP1YKL007W YLR179CQ06252 201 aaKnown RBP1.68□□□□□ -2.14
CAP1YKL007W BBP1Q12365 385 aa1.68□□□□□ -2.14
CAP1YKL007W UBR2Q07963 1872 aa1.68□□□□□ -2.14
CAP1YKL007W YDR157WA0A023PZE8 133 aa1.67□□□□□ -2.14
CAP1YKL007W COX5AP00424 153 aa1.67□□□□□ -2.14
CAP1YKL007W CDC8P00572 216 aa1.67□□□□□ -2.14
CAP1YKL007W GCN3P14741 305 aa1.67□□□□□ -2.14
CAP1YKL007W YPK2P18961 677 aa1.67□□□□□ -2.14
CAP1YKL007W RME1P32338 300 aaKnown RBP1.67□□□□□ -2.14
CAP1YKL007W TAF14P35189 244 aa1.67□□□□□ -2.14
CAP1YKL007W TRM5P38793 499 aa1.67□□□□□ -2.14
CAP1YKL007W RPF1P38805 295 aaKnown RBP1.67□□□□□ -2.14
CAP1YKL007W ERV29P53337 310 aa1.67□□□□□ -2.14
CAP1YKL007W PDR17P53844 350 aa1.67□□□□□ -2.14
CAP1YKL007W YDR248CQ03786 193 aa1.67□□□□□ -2.14
CAP1YKL007W YLR030WQ07967 263 aa1.67□□□□□ -2.14
CAP1YKL007W CDC28P00546 298 aaKnown RBP1.66□□□□□ -2.14
CAP1YKL007W Q0255P03881 472 aa1.66□□□□□ -2.14
CAP1YKL007W DSF1P0CX08 502 aa1.66□□□□□ -2.14
CAP1YKL007W YNR073CP0CX09 502 aa1.66□□□□□ -2.14
CAP1YKL007W FBA1P14540 359 aaKnown RBP1.66□□□□□ -2.14
CAP1YKL007W RFA3P26755 122 aaKnown RBP1.66□□□□□ -2.14
CAP1YKL007W APS1P35181 156 aa1.66□□□□□ -2.14
CAP1YKL007W KDX1P36005 433 aa1.66□□□□□ -2.14
CAP1YKL007W SRY1P36007 326 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms