RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C NVJ1P38881 321 aa6.07□□□□□ -1.44
SOD2YHR008C IRC24P40580 263 aa6.07□□□□□ -1.44
SOD2YHR008C ERV29P53337 310 aa6.07□□□□□ -1.44
SOD2YHR008C YOR352WQ08816 343 aa6.07□□□□□ -1.44
SOD2YHR008C YGK3Q12222 375 aaPredicted RBP6.07□□□□□ -1.44
SOD2YHR008C YPR108W-AQ3E7B3 70 aa6.07□□□□□ -1.44
SOD2YHR008C HBN1Q96VH4 193 aa6.07□□□□□ -1.44
SOD2YHR008C VPS63O13549 108 aa6.06□□□□□ -1.44
SOD2YHR008C URA3P03962 267 aa6.06□□□□□ -1.44
SOD2YHR008C PMR1P13586 950 aa6.06□□□□□ -1.44
SOD2YHR008C IMD2P38697 523 aaKnown RBP6.06□□□□□ -1.44
SOD2YHR008C LST8P41318 303 aa6.06□□□□□ -1.44
SOD2YHR008C FMP33P46998 180 aa6.06□□□□□ -1.44
SOD2YHR008C TDA4P47153 279 aa6.06□□□□□ -1.44
SOD2YHR008C DOC1P53068 250 aa6.06□□□□□ -1.44
SOD2YHR008C FYV6P53913 173 aa6.06□□□□□ -1.44
SOD2YHR008C ATG39Q06159 398 aa6.06□□□□□ -1.44
SOD2YHR008C YNG1Q08465 219 aa6.06□□□□□ -1.44
SOD2YHR008C GCN4P03069 281 aa6.05□□□□□ -1.44
SOD2YHR008C DIT1P21623 536 aa6.05□□□□□ -1.44
SOD2YHR008C YHR138CP38841 114 aaPredicted RBP6.05□□□□□ -1.44
SOD2YHR008C CIN4P39110 191 aa6.05□□□□□ -1.44
SOD2YHR008C YFH1Q07540 174 aa6.05□□□□□ -1.44
SOD2YHR008C HRD1Q08109 551 aa6.05□□□□□ -1.44
SOD2YHR008C YPR013CQ12145 317 aa6.05□□□□□ -1.44
SOD2YHR008C NOP1P15646 327 aaKnown RBP6.04□□□□□ -1.44
SOD2YHR008C YPT31P38555 223 aaKnown RBP6.04□□□□□ -1.44
SOD2YHR008C BOL3P39724 118 aa6.04□□□□□ -1.44
SOD2YHR008C SIM1P40472 476 aa6.04□□□□□ -1.44
SOD2YHR008C BNA6P43619 295 aa6.04□□□□□ -1.44
SOD2YHR008C YJR011CP47086 261 aaPredicted RBP6.04□□□□□ -1.44
SOD2YHR008C MIC26P50087 233 aa6.04□□□□□ -1.44
SOD2YHR008C ODC2Q99297 307 aa6.04□□□□□ -1.44
SOD2YHR008C CHO1P08456 276 aa6.03□□□□□ -1.44
SOD2YHR008C AST1P35183 429 aa6.03□□□□□ -1.44
SOD2YHR008C SHE2P36068 246 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
SOD2YHR008C EGD2P38879 174 aaKnown RBP6.03□□□□□ -1.44
SOD2YHR008C TRM10Q12400 293 aa6.03□□□□□ -1.44
SOD2YHR008C URA6P15700 204 aa6.02□□□□□ -1.45
SOD2YHR008C ATP3P38077 311 aaKnown RBP6.02□□□□□ -1.45
SOD2YHR008C FMP23P38231 175 aa6.02□□□□□ -1.45
SOD2YHR008C SWT21P53873 357 aaPredicted RBP6.02□□□□□ -1.45
SOD2YHR008C HAL1Q01766 294 aa6.02□□□□□ -1.45
SOD2YHR008C RAD28Q12021 506 aa6.02□□□□□ -1.45
SOD2YHR008C CYC3P06182 269 aa6.01□□□□□ -1.45
SOD2YHR008C SSZ1P38788 538 aaKnown RBP6.01□□□□□ -1.45
SOD2YHR008C YEL009C-AA0A023PZF2 135 aa6□□□□□ -1.45
SOD2YHR008C SOD1P00445 154 aaKnown RBP6□□□□□ -1.45
SOD2YHR008C POP2P39008 433 aa6□□□□□ -1.45
SOD2YHR008C AIM20P40451 204 aa6□□□□□ -1.45
SOD2YHR008C YIL060WP40519 144 aa6□□□□□ -1.45
SOD2YHR008C RPR2P40571 144 aa6□□□□□ -1.45
SOD2YHR008C SSU72P53538 206 aaPredicted RBP6□□□□□ -1.45
SOD2YHR008C FMP42Q04991 504 aa6□□□□□ -1.45
SOD2YHR008C RXT3Q07458 294 aa6□□□□□ -1.45
SOD2YHR008C CDC34P14682 295 aa5.99□□□□□ -1.45
SOD2YHR008C SEN2P16658 377 aa5.99□□□□□ -1.45
SOD2YHR008C PRE9P23638 258 aaKnown RBP5.99□□□□□ -1.45
SOD2YHR008C RIB7P33312 244 aa5.99□□□□□ -1.45
SOD2YHR008C UPS2P35200 230 aa5.99□□□□□ -1.45
SOD2YHR008C DOG2P38773 246 aa5.99□□□□□ -1.45
SOD2YHR008C DOG1P38774 246 aa5.99□□□□□ -1.45
SOD2YHR008C RPA34P47006 233 aaPredicted RBP5.99□□□□□ -1.45
SOD2YHR008C ARO8P53090 500 aaKnown RBP5.99□□□□□ -1.45
SOD2YHR008C YMR130WQ04223 302 aa5.99□□□□□ -1.45
SOD2YHR008C SOG2Q08817 791 aa5.99□□□□□ -1.45
SOD2YHR008C TIR4Q12218 487 aaPredicted RBP5.99□□□□□ -1.45
SOD2YHR008C AGC1Q12482 902 aa5.99□□□□□ -1.45
SOD2YHR008C HUG1Q6Q5K6 68 aa5.99□□□□□ -1.45
SOD2YHR008C HIS3P06633 220 aa5.98□□□□□ -1.45
SOD2YHR008C YBR184WP38299 523 aa5.98□□□□□ -1.45
SOD2YHR008C YAR068WP39564 161 aa5.98□□□□□ -1.45
SOD2YHR008C POR2P40478 281 aa5.98□□□□□ -1.45
SOD2YHR008C IRC18P47056 224 aa5.98□□□□□ -1.45
SOD2YHR008C YAE1P47118 141 aaPredicted RBP5.98□□□□□ -1.45
SOD2YHR008C GNP1P48813 663 aa5.98□□□□□ -1.45
SOD2YHR008C STP4Q07351 490 aa5.98□□□□□ -1.45
SOD2YHR008C MED4Q12343 284 aa5.98□□□□□ -1.45
SOD2YHR008C CYC7P00045 113 aa5.97□□□□□ -1.45
SOD2YHR008C MIR1P23641 311 aaKnown RBP5.97□□□□□ -1.45
SOD2YHR008C PHD1P36093 366 aa5.97□□□□□ -1.45
SOD2YHR008C MST28P39552 234 aa5.97□□□□□ -1.45
SOD2YHR008C PDS1P40316 373 aaPredicted RBP5.97□□□□□ -1.45
SOD2YHR008C MSS2P40990 351 aa5.97□□□□□ -1.45
SOD2YHR008C MST27P53176 234 aa5.97□□□□□ -1.45
SOD2YHR008C VBA1Q04301 562 aa5.97□□□□□ -1.45
SOD2YHR008C MSS1P32559 526 aaPredicted RBP5.96□□□□□ -1.46
SOD2YHR008C YGR042WP53227 271 aa5.96□□□□□ -1.46
SOD2YHR008C VHT1P53241 593 aa5.96□□□□□ -1.46
SOD2YHR008C MED11Q99278 115 aa5.96□□□□□ -1.46
SOD2YHR008C SGF11Q03067 99 aa5.95□□□□□ -1.46
SOD2YHR008C VAM10Q08474 114 aa5.95□□□□□ -1.46
SOD2YHR008C TIM18Q08749 192 aa5.95□□□□□ -1.46
SOD2YHR008C VMA8P32610 256 aaKnown RBP5.94□□□□□ -1.46
SOD2YHR008C RTT105P40063 208 aa5.94□□□□□ -1.46
SOD2YHR008C VMA10P48836 114 aaKnown RBP5.94□□□□□ -1.46
SOD2YHR008C MEH1Q02205 184 aa5.94□□□□□ -1.46
SOD2YHR008C FEX1Q08913 375 aa5.94□□□□□ -1.46
SOD2YHR008C FEX2Q08991 375 aa5.94□□□□□ -1.46
SOD2YHR008C TAF3Q12297 353 aa5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms