RNA–Protein interactions for RNA: YGR181W

TIM13, Transcript of Mitochondrial intermembrane space protein, yeast

Gene TIM13, Length 318 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM13	YGR181W	YOL160W	Q08321	113 aa		0.48	□□□□□ -2.33
TIM13	YGR181W	YFR032C-B	Q8TGU2	87 aa		0.48	□□□□□ -2.33
TIM13	YGR181W	THP2	O13539	261 aa	Known RBP	0.47	□□□□□ -2.33
TIM13	YGR181W	SEC4	P07560	215 aa	Known RBP	0.47	□□□□□ -2.33
TIM13	YGR181W	RPL27A	P0C2H6	136 aa	Known RBP	0.47	□□□□□ -2.33
TIM13	YGR181W	URA5	P13298	226 aa	Known RBP	0.47	□□□□□ -2.33
TIM13	YGR181W	RPB3	P16370	318 aa	Known RBP	0.47	□□□□□ -2.33
TIM13	YGR181W	YMR31	P19955	123 aa		0.47	□□□□□ -2.33
TIM13	YGR181W	BET1	P22804	142 aa		0.47	□□□□□ -2.33
TIM13	YGR181W	MGM101	P32787	269 aa	Known RBP	0.47	□□□□□ -2.33
TIM13	YGR181W	MIC12	P38341	106 aa		0.47	□□□□□ -2.33
TIM13	YGR181W	PET191	Q02772	108 aa		0.47	□□□□□ -2.33
TIM13	YGR181W	YHR214C-E	Q8TGK0	99 aa		0.47	□□□□□ -2.33
TIM13	YGR181W	VMA6	P32366	345 aa	Known RBP	0.46	□□□□□ -2.34
TIM13	YGR181W	RMD6	P39975	231 aa		0.46	□□□□□ -2.34
TIM13	YGR181W	YER034W	P40022	185 aa	Known RBP	0.46	□□□□□ -2.34
TIM13	YGR181W	MDM35	O60200	86 aa		0.45	□□□□□ -2.34
TIM13	YGR181W	RPL28	P02406	149 aa	Known RBP	0.45	□□□□□ -2.34
TIM13	YGR181W	PTM1	P32857	523 aa		0.45	□□□□□ -2.34
TIM13	YGR181W	AST2	P39945	430 aa	Known RBP	0.45	□□□□□ -2.34
TIM13	YGR181W	YER085C	P40058	173 aa		0.45	□□□□□ -2.34
TIM13	YGR181W	YPL073C	P40323	161 aa		0.45	□□□□□ -2.34
TIM13	YGR181W	HYR1	P40581	163 aa	Known RBP	0.45	□□□□□ -2.34
TIM13	YGR181W	MPC3	P53311	146 aa		0.45	□□□□□ -2.34
TIM13	YGR181W	YMR252C	Q04814	134 aa		0.45	□□□□□ -2.34
TIM13	YGR181W	YRA1	Q12159	226 aa	Known RBP	0.45	□□□□□ -2.34
TIM13	YGR181W	GCN3	P14741	305 aa		0.44	□□□□□ -2.34
TIM13	YGR181W	SPO13	P23624	291 aa		0.44	□□□□□ -2.34
TIM13	YGR181W	RPL24B	P24000	155 aa	Known RBP	0.44	□□□□□ -2.34
TIM13	YGR181W	RTC3	P38804	111 aa	Predicted RBP	0.44	□□□□□ -2.34
TIM13	YGR181W	YEL008W	P40001	126 aa		0.44	□□□□□ -2.34
TIM13	YGR181W	YFH7	P43591	353 aa		0.44	□□□□□ -2.34
TIM13	YGR181W	MGA1	P53050	456 aa		0.44	□□□□□ -2.34
TIM13	YGR181W	YNG1	Q08465	219 aa		0.44	□□□□□ -2.34
TIM13	YGR181W	YLR422W	Q06409	1932 aa		0.43	□□□□□ -2.34
TIM13	YGR181W	YCL042W	P25572	119 aa		0.43	□□□□□ -2.34
TIM13	YGR181W	PRX1	P34227	261 aa	Known RBP	0.43	□□□□□ -2.34
TIM13	YGR181W	PDR17	P53844	350 aa		0.43	□□□□□ -2.34
TIM13	YGR181W	COG5	P53951	403 aa		0.43	□□□□□ -2.34
TIM13	YGR181W	YPR174C	Q06616	221 aa	Predicted RBP	0.43	□□□□□ -2.34
TIM13	YGR181W	LCL2	Q08045	131 aa		0.43	□□□□□ -2.34
TIM13	YGR181W	DGA1	Q08650	418 aa		0.43	□□□□□ -2.34
TIM13	YGR181W	YKL183C-A	Q3E765	70 aa		0.43	□□□□□ -2.34
TIM13	YGR181W	SEY1	Q99287	776 aa		0.43	□□□□□ -2.34
TIM13	YGR181W	YBR121C-A	P0C5L4	52 aa		0.42	□□□□□ -2.34
TIM13	YGR181W	PPA2	P28239	310 aa		0.42	□□□□□ -2.34
TIM13	YGR181W	TVP23	P38962	199 aa		0.42	□□□□□ -2.34
TIM13	YGR181W	ADO1	P47143	340 aa	Known RBP	0.42	□□□□□ -2.34
TIM13	YGR181W	LSM7	P53905	115 aa	Known RBP	0.42	□□□□□ -2.34
TIM13	YGR181W	POR1	P04840	283 aa	Known RBP	0.41	□□□□□ -2.34
TIM13	YGR181W	CKS1	P20486	150 aa	Known RBP	0.41	□□□□□ -2.34
TIM13	YGR181W	MAG1	P22134	296 aa	Known RBP	0.41	□□□□□ -2.34
TIM13	YGR181W	YHL018W	P38744	120 aa	Predicted RBP	0.41	□□□□□ -2.34
TIM13	YGR181W	HPA3	P39979	161 aa		0.41	□□□□□ -2.34
TIM13	YGR181W	ERG28	P40030	148 aa		0.41	□□□□□ -2.34
TIM13	YGR181W	IRC18	P47056	224 aa		0.41	□□□□□ -2.34
TIM13	YGR181W	JLP1	Q12358	412 aa		0.41	□□□□□ -2.34
TIM13	YGR181W	ODC2	Q99297	307 aa		0.41	□□□□□ -2.34
TIM13	YGR181W	RPL25	P04456	142 aa	Known RBP	0.4	□□□□□ -2.35
TIM13	YGR181W	YNL194C	P40169	301 aa		0.4	□□□□□ -2.35
TIM13	YGR181W	YLR460C	P54007	376 aa		0.4	□□□□□ -2.35
TIM13	YGR181W	DAD4	P69851	72 aa		0.4	□□□□□ -2.35
TIM13	YGR181W	DIG2	Q03373	323 aa	Known RBP	0.4	□□□□□ -2.35
TIM13	YGR181W	HNT1	Q04344	158 aa	Known RBP	0.4	□□□□□ -2.35
TIM13	YGR181W	IKI3	Q06706	1349 aa	Known RBP	0.39	□□□□□ -2.35
TIM13	YGR181W	YDR157W	A0A023PZE8	133 aa		0.39	□□□□□ -2.35
TIM13	YGR181W	MER1	P16523	270 aa		0.39	□□□□□ -2.35
TIM13	YGR181W	OCH1	P31755	480 aa		0.39	□□□□□ -2.35
TIM13	YGR181W	CBT1	P36038	271 aa	Predicted RBP	0.39	□□□□□ -2.35
TIM13	YGR181W	YEA4	P40004	342 aa		0.39	□□□□□ -2.35
TIM13	YGR181W	ERG10	P41338	398 aa	Known RBP	0.39	□□□□□ -2.35
TIM13	YGR181W	OTU1	P43558	301 aa		0.39	□□□□□ -2.35
TIM13	YGR181W	GET1	P53192	235 aa		0.39	□□□□□ -2.35
TIM13	YGR181W	RNH202	Q05635	350 aa		0.39	□□□□□ -2.35
TIM13	YGR181W	FIT2	Q08906	153 aa		0.39	□□□□□ -2.35
TIM13	YGR181W	COA3	Q3E7B2	85 aa		0.39	□□□□□ -2.35
TIM13	YGR181W	COX8	P04039	78 aa		0.38	□□□□□ -2.35
TIM13	YGR181W	RPB7	P34087	171 aa		0.38	□□□□□ -2.35
TIM13	YGR181W	PAN3	P36102	679 aa	Predicted RBP	0.38	□□□□□ -2.35
TIM13	YGR181W	ECM4	P36156	370 aa		0.38	□□□□□ -2.35
TIM13	YGR181W	HMF1	P40037	129 aa	Known RBP	0.38	□□□□□ -2.35
TIM13	YGR181W	RTR1	P40084	226 aa	Predicted RBP	0.38	□□□□□ -2.35
TIM13	YGR181W	YRB1	P41920	201 aa	Known RBP	0.38	□□□□□ -2.35
TIM13	YGR181W	RAD17	P48581	401 aa		0.38	□□□□□ -2.35
TIM13	YGR181W	GGA1	Q06336	557 aa		0.38	□□□□□ -2.35
TIM13	YGR181W	PRP11	Q07350	266 aa	Predicted RBP	0.38	□□□□□ -2.35
TIM13	YGR181W	IRC23	Q08416	157 aa		0.38	□□□□□ -2.35
TIM13	YGR181W	DUR1,2	P32528	1835 aa	Known RBP	0.37	□□□□□ -2.35
TIM13	YGR181W	NHP6B	P11633	99 aa	Known RBP	0.37	□□□□□ -2.35
TIM13	YGR181W	STP22	P25604	385 aa		0.37	□□□□□ -2.35
TIM13	YGR181W	SPS18	P32572	300 aa		0.37	□□□□□ -2.35
TIM13	YGR181W	BMH2	P34730	273 aa	Known RBP	0.37	□□□□□ -2.35
TIM13	YGR181W	TRM5	P38793	499 aa		0.37	□□□□□ -2.35
TIM13	YGR181W	AIM25	P47140	327 aa		0.37	□□□□□ -2.35
TIM13	YGR181W	UBC12	P52491	188 aa		0.37	□□□□□ -2.35
TIM13	YGR181W	CWC23	P52868	283 aa	Predicted RBP	0.37	□□□□□ -2.35
TIM13	YGR181W	MDM32	Q12171	622 aa		0.37	□□□□□ -2.35
TIM13	YGR181W	RIF1	P29539	1916 aa		0.36	□□□□□ -2.35
TIM13	YGR181W	CDC36	P06100	191 aa	Predicted RBP	0.36	□□□□□ -2.35
TIM13	YGR181W	PHO85	P17157	305 aa		0.36	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms