RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W ATP10P18496 279 aa7.08□□□□□ -1.28
UFD1YGR048W SCO1P23833 295 aa7.08□□□□□ -1.28
UFD1YGR048W NFS1P25374 497 aa7.08□□□□□ -1.28
UFD1YGR048W YCR100CP25606 316 aa7.08□□□□□ -1.28
UFD1YGR048W ECM33P38248 429 aaKnown RBP7.08□□□□□ -1.28
UFD1YGR048W ACA1P39970 489 aa7.08□□□□□ -1.28
UFD1YGR048W PIC2P40035 300 aa7.08□□□□□ -1.28
UFD1YGR048W MOB1P40484 314 aa7.08□□□□□ -1.28
UFD1YGR048W MTC3P53077 123 aa7.08□□□□□ -1.28
UFD1YGR048W YIP4P53093 235 aa7.08□□□□□ -1.28
UFD1YGR048W YNL092WP53934 400 aa7.08□□□□□ -1.28
UFD1YGR048W POS5Q06892 414 aa7.08□□□□□ -1.28
UFD1YGR048W STP4Q07351 490 aa7.08□□□□□ -1.28
UFD1YGR048W RPL7BQ12213 244 aaKnown RBP7.08□□□□□ -1.28
UFD1YGR048W SME1Q12330 94 aaPredicted RBP7.08□□□□□ -1.28
UFD1YGR048W QCR2P07257 368 aa7.07□□□□□ -1.28
UFD1YGR048W YAR066WP0CX18 203 aa7.07□□□□□ -1.28
UFD1YGR048W YHR214WP0CX19 203 aa7.07□□□□□ -1.28
UFD1YGR048W OLE1P21147 510 aaKnown RBP7.07□□□□□ -1.28
UFD1YGR048W TRX3P25372 127 aa7.07□□□□□ -1.28
UFD1YGR048W IDH2P28241 369 aaKnown RBP7.07□□□□□ -1.28
UFD1YGR048W MKK2P32491 506 aa7.07□□□□□ -1.28
UFD1YGR048W PSD1P39006 500 aa7.07□□□□□ -1.28
UFD1YGR048W YJL068CP40363 299 aa7.07□□□□□ -1.28
UFD1YGR048W YJL028WP47062 111 aa7.07□□□□□ -1.28
UFD1YGR048W YGL230CP53074 147 aa7.07□□□□□ -1.28
UFD1YGR048W SGF73P53165 657 aa7.07□□□□□ -1.28
UFD1YGR048W LST7P53237 242 aa7.07□□□□□ -1.28
UFD1YGR048W NRG1Q03125 231 aa7.07□□□□□ -1.28
UFD1YGR048W INP1Q03694 420 aa7.07□□□□□ -1.28
UFD1YGR048W RSF1Q05043 376 aa7.07□□□□□ -1.28
UFD1YGR048W YOR378WQ08902 515 aa7.07□□□□□ -1.28
UFD1YGR048W YPR011CQ12251 326 aa7.07□□□□□ -1.28
UFD1YGR048W URA5P13298 226 aaKnown RBP7.06□□□□□ -1.28
UFD1YGR048W TKL1P23254 680 aaKnown RBP7.06□□□□□ -1.28
UFD1YGR048W MEK1P24719 497 aaPredicted RBP7.06□□□□□ -1.28
UFD1YGR048W ERG4P25340 473 aa7.06□□□□□ -1.28
UFD1YGR048W MSS51P32335 436 aa7.06□□□□□ -1.28
UFD1YGR048W MNS1P32906 549 aa7.06□□□□□ -1.28
UFD1YGR048W ARC40P38328 384 aaKnown RBP7.06□□□□□ -1.28
UFD1YGR048W FYV4P38783 130 aaPredicted RBP7.06□□□□□ -1.28
UFD1YGR048W YER134CP40081 178 aa7.06□□□□□ -1.28
UFD1YGR048W GPP2P40106 250 aaKnown RBP7.06□□□□□ -1.28
UFD1YGR048W YNL198CP40166 100 aa7.06□□□□□ -1.28
UFD1YGR048W SEC24P40482 926 aaKnown RBP7.06□□□□□ -1.28
UFD1YGR048W GPP1P41277 250 aaKnown RBP7.06□□□□□ -1.28
UFD1YGR048W YGR117CP53270 476 aa7.06□□□□□ -1.28
UFD1YGR048W YMR082CQ04276 118 aa7.06□□□□□ -1.28
UFD1YGR048W ARR3Q06598 404 aa7.06□□□□□ -1.28
UFD1YGR048W FCY22Q12119 530 aa7.06□□□□□ -1.28
UFD1YGR048W YDL177CQ12257 170 aa7.06□□□□□ -1.28
UFD1YGR048W YDR262WQ12331 272 aa7.06□□□□□ -1.28
UFD1YGR048W YLR361C-AQ3E795 98 aa7.06□□□□□ -1.28
UFD1YGR048W HXT4P32467 576 aa7.05□□□□□ -1.28
UFD1YGR048W SOR1P35497 357 aaKnown RBP7.05□□□□□ -1.28
UFD1YGR048W NNK1P36003 928 aa7.05□□□□□ -1.28
UFD1YGR048W BAT1P38891 393 aaKnown RBP7.05□□□□□ -1.28
UFD1YGR048W UME6P39001 836 aa7.05□□□□□ -1.28
UFD1YGR048W YEL073CP39974 107 aa7.05□□□□□ -1.28
UFD1YGR048W HAC1P41546 238 aa7.05□□□□□ -1.28
UFD1YGR048W SAM37P50110 327 aa7.05□□□□□ -1.28
UFD1YGR048W ERG26P53199 349 aaKnown RBP7.05□□□□□ -1.28
UFD1YGR048W CSL4P53859 292 aaPredicted RBP7.05□□□□□ -1.28
UFD1YGR048W YNL143CP53908 130 aa7.05□□□□□ -1.28
UFD1YGR048W IZH1Q03419 316 aa7.05□□□□□ -1.28
UFD1YGR048W TSA2Q04120 196 aa7.05□□□□□ -1.28
UFD1YGR048W YPR174CQ06616 221 aaPredicted RBP7.05□□□□□ -1.28
UFD1YGR048W SOR2Q07786 357 aa7.05□□□□□ -1.28
UFD1YGR048W ENB1Q08299 606 aa7.05□□□□□ -1.28
UFD1YGR048W IRC13Q08630 104 aa7.05□□□□□ -1.28
UFD1YGR048W YPR071WQ12346 211 aa7.05□□□□□ -1.28
UFD1YGR048W ORT1Q12375 292 aa7.05□□□□□ -1.28
UFD1YGR048W YLR363W-AQ3E747 85 aa7.05□□□□□ -1.28
UFD1YGR048W ADH1P00330 348 aaKnown RBP7.04□□□□□ -1.28
UFD1YGR048W COX1P00401 534 aa7.04□□□□□ -1.28
UFD1YGR048W GLN3P18494 730 aa7.04□□□□□ -1.28
UFD1YGR048W GEX1P25596 615 aa7.04□□□□□ -1.28
UFD1YGR048W SRB5P32585 307 aa7.04□□□□□ -1.28
UFD1YGR048W YHR097CP38809 366 aaKnown RBP7.04□□□□□ -1.28
UFD1YGR048W YIL161WP40449 235 aaKnown RBP7.04□□□□□ -1.28
UFD1YGR048W FET4P40988 552 aa7.04□□□□□ -1.28
UFD1YGR048W SFH5P47008 294 aa7.04□□□□□ -1.28
UFD1YGR048W BXI1P48558 297 aa7.04□□□□□ -1.28
UFD1YGR048W DAD3P69850 94 aa7.04□□□□□ -1.28
UFD1YGR048W GIS1Q03833 894 aa7.04□□□□□ -1.28
UFD1YGR048W YMR074CQ04773 145 aa7.04□□□□□ -1.28
UFD1YGR048W YDL242WQ07746 117 aa7.04□□□□□ -1.28
UFD1YGR048W GEP5Q12393 293 aa7.04□□□□□ -1.28
UFD1YGR048W YPT1P01123 206 aaKnown RBP7.03□□□□□ -1.28
UFD1YGR048W RPL35AP0CX84 120 aaKnown RBP7.03□□□□□ -1.28
UFD1YGR048W RPL35BP0CX85 120 aaKnown RBP7.03□□□□□ -1.28
UFD1YGR048W SEC11P15367 167 aa7.03□□□□□ -1.28
UFD1YGR048W YGL010WP25338 174 aa7.03□□□□□ -1.28
UFD1YGR048W YCR023CP25351 611 aa7.03□□□□□ -1.28
UFD1YGR048W ECM15P35195 104 aa7.03□□□□□ -1.28
UFD1YGR048W TEM1P38987 245 aa7.03□□□□□ -1.28
UFD1YGR048W COX15P40086 486 aa7.03□□□□□ -1.28
UFD1YGR048W MSL1P40567 111 aaPredicted RBP7.03□□□□□ -1.28
UFD1YGR048W ERG25P53045 309 aa7.03□□□□□ -1.28
UFD1YGR048W ALG9P53868 555 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 102.5 ms