RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W MAG1P22134 296 aaKnown RBP3.43□□□□□ -1.86
UBP6YFR010W AGA1P32323 725 aa3.43□□□□□ -1.86
UBP6YFR010W SEC17P32602 292 aa3.43□□□□□ -1.86
UBP6YFR010W HEM14P40012 539 aa3.43□□□□□ -1.86
UBP6YFR010W YGL082WP53155 381 aa3.43□□□□□ -1.86
UBP6YFR010W VPS28Q02767 242 aa3.43□□□□□ -1.86
UBP6YFR010W GOT1Q03554 138 aa3.43□□□□□ -1.86
UBP6YFR010W YNL277W-AQ3E7Z0 62 aa3.43□□□□□ -1.86
UBP6YFR010W PRE1P22141 198 aaKnown RBP3.42□□□□□ -1.86
UBP6YFR010W RNP1P32385 249 aa3.42□□□□□ -1.86
UBP6YFR010W GLC7P32598 312 aaKnown RBP3.42□□□□□ -1.86
UBP6YFR010W TKL2P33315 681 aa3.42□□□□□ -1.86
UBP6YFR010W SIP2P34164 415 aaKnown RBP3.42□□□□□ -1.86
UBP6YFR010W TIF34P40217 347 aaKnown RBP3.42□□□□□ -1.86
UBP6YFR010W RRT5P43607 289 aa3.42□□□□□ -1.86
UBP6YFR010W SFT1P43682 97 aa3.42□□□□□ -1.86
UBP6YFR010W RPE1P46969 238 aa3.42□□□□□ -1.86
UBP6YFR010W ARP3P47117 449 aaKnown RBP3.42□□□□□ -1.86
UBP6YFR010W SCS3P53012 380 aa3.42□□□□□ -1.86
UBP6YFR010W FMP41P53889 259 aaKnown RBP3.42□□□□□ -1.86
UBP6YFR010W YKR005CQ02203 525 aa3.42□□□□□ -1.86
UBP6YFR010W VHS1Q03785 461 aa3.42□□□□□ -1.86
UBP6YFR010W SPC3Q12133 184 aa3.42□□□□□ -1.86
UBP6YFR010W YPL245WQ12179 454 aaKnown RBP3.42□□□□□ -1.86
UBP6YFR010W TIR4Q12218 487 aaPredicted RBP3.42□□□□□ -1.86
UBP6YFR010W EAF3Q12432 401 aa3.42□□□□□ -1.86
UBP6YFR010W YPR014CQ6B0W2 109 aa3.42□□□□□ -1.86
UBP6YFR010W RPS14AP06367 137 aaKnown RBP3.41□□□□□ -1.86
UBP6YFR010W TIR1P10863 254 aa3.41□□□□□ -1.86
UBP6YFR010W YBL081WP38180 368 aaKnown RBP3.41□□□□□ -1.86
UBP6YFR010W RFS1P38234 210 aaKnown RBP3.41□□□□□ -1.86
UBP6YFR010W RPS14BP39516 138 aaKnown RBP3.41□□□□□ -1.86
UBP6YFR010W AVT7P40501 490 aa3.41□□□□□ -1.86
UBP6YFR010W MET5P47169 1442 aa3.41□□□□□ -1.86
UBP6YFR010W COS10P52924 374 aa3.41□□□□□ -1.86
UBP6YFR010W AAH1P53909 347 aa3.41□□□□□ -1.86
UBP6YFR010W APJ1P53940 528 aa3.41□□□□□ -1.86
UBP6YFR010W YMR099CQ03161 297 aaKnown RBP3.41□□□□□ -1.86
UBP6YFR010W YMR181CQ03231 154 aa3.41□□□□□ -1.86
UBP6YFR010W MIM1Q08176 113 aa3.41□□□□□ -1.86
UBP6YFR010W SCP1Q08873 200 aa3.41□□□□□ -1.86
UBP6YFR010W SAS5Q99314 248 aa3.41□□□□□ -1.86
UBP6YFR010W YLR462WO13556 202 aa3.4□□□□□ -1.86
UBP6YFR010W Q0255P03881 472 aa3.4□□□□□ -1.86
UBP6YFR010W PIS1P06197 220 aaKnown RBP3.4□□□□□ -1.86
UBP6YFR010W CKS1P20486 150 aaKnown RBP3.4□□□□□ -1.86
UBP6YFR010W SRP21P32342 167 aa3.4□□□□□ -1.86
UBP6YFR010W PRE5P40302 234 aaKnown RBP3.4□□□□□ -1.86
UBP6YFR010W CAT5P41735 233 aa3.4□□□□□ -1.86
UBP6YFR010W FIP1P45976 327 aa3.4□□□□□ -1.86
UBP6YFR010W VPS25P47142 202 aa3.4□□□□□ -1.86
UBP6YFR010W FMP48P53233 369 aa3.4□□□□□ -1.86
UBP6YFR010W RSM27P53305 110 aa3.4□□□□□ -1.86
UBP6YFR010W ALG9P53868 555 aaKnown RBP3.4□□□□□ -1.86
UBP6YFR010W YLR179CQ06252 201 aaKnown RBP3.4□□□□□ -1.86
UBP6YFR010W SNX3Q08826 162 aaKnown RBP3.4□□□□□ -1.86
UBP6YFR010W YPS3Q12303 508 aa3.4□□□□□ -1.86
UBP6YFR010W OCA6Q12454 224 aa3.4□□□□□ -1.86
UBP6YFR010W CSR2Q12734 1121 aa3.4□□□□□ -1.86
UBP6YFR010W RPO31P04051 1460 aa3.4□□□□□ -1.87
UBP6YFR010W ANB1P19211 157 aa3.39□□□□□ -1.87
UBP6YFR010W ATS1P31386 333 aa3.39□□□□□ -1.87
UBP6YFR010W SHB17P36136 271 aaKnown RBP3.39□□□□□ -1.87
UBP6YFR010W YKR070WP36151 352 aaKnown RBP3.39□□□□□ -1.87
UBP6YFR010W YBR063CP38083 404 aa3.39□□□□□ -1.87
UBP6YFR010W YHR140WP38842 239 aa3.39□□□□□ -1.87
UBP6YFR010W COX14P39103 70 aa3.39□□□□□ -1.87
UBP6YFR010W YEA6P39953 335 aa3.39□□□□□ -1.87
UBP6YFR010W TTI2P47168 421 aa3.39□□□□□ -1.87
UBP6YFR010W YGL088WP53151 121 aa3.39□□□□□ -1.87
UBP6YFR010W YNL033WP53964 284 aa3.39□□□□□ -1.87
UBP6YFR010W YNL019CP53975 284 aa3.39□□□□□ -1.87
UBP6YFR010W YOR292CQ08743 309 aa3.39□□□□□ -1.87
UBP6YFR010W HSL1P34244 1518 aa3.39□□□□□ -1.87
UBP6YFR010W RPL15AP05748 204 aaKnown RBP3.39□□□□□ -1.87
UBP6YFR010W GGC1P38988 300 aa3.39□□□□□ -1.87
UBP6YFR010W YEL075CP39972 122 aa3.39□□□□□ -1.87
UBP6YFR010W EDC2P40023 145 aaPredicted RBP3.39□□□□□ -1.87
UBP6YFR010W YER189WP40104 122 aa3.39□□□□□ -1.87
UBP6YFR010W GPI2P46961 280 aa3.39□□□□□ -1.87
UBP6YFR010W DIE2P50076 525 aa3.39□□□□□ -1.87
UBP6YFR010W YGL230CP53074 147 aa3.39□□□□□ -1.87
UBP6YFR010W RPL15BP54780 204 aaPredicted RBP3.39□□□□□ -1.87
UBP6YFR010W RNH202Q05635 350 aa3.39□□□□□ -1.87
UBP6YFR010W NAT3Q06504 195 aa3.39□□□□□ -1.87
UBP6YFR010W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
UBP6YFR010W YLR042CQ07990 161 aa3.39□□□□□ -1.87
UBP6YFR010W GTT2Q12390 233 aa3.39□□□□□ -1.87
UBP6YFR010W RPS18AP0CX55 146 aaKnown RBP3.38□□□□□ -1.87
UBP6YFR010W RPS18BP0CX56 146 aaPredicted RBP3.38□□□□□ -1.87
UBP6YFR010W YCR025CP25352 136 aa3.38□□□□□ -1.87
UBP6YFR010W LDB16P25587 256 aa3.38□□□□□ -1.87
UBP6YFR010W PEX4P29340 183 aa3.38□□□□□ -1.87
UBP6YFR010W RPL14AP36105 138 aaKnown RBP3.38□□□□□ -1.87
UBP6YFR010W FMP46P36141 133 aaKnown RBP3.38□□□□□ -1.87
UBP6YFR010W ETR1P38071 380 aa3.38□□□□□ -1.87
UBP6YFR010W RPL14BP38754 138 aaKnown RBP3.38□□□□□ -1.87
UBP6YFR010W TIM17P39515 158 aa3.38□□□□□ -1.87
UBP6YFR010W YER181CP40097 107 aa3.38□□□□□ -1.87
UBP6YFR010W YIL024CP40543 189 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms